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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0136000-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:1909695:1912980:-1 gene:Os06g0136000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hypersensitive-induced reaction protein 4. (Os06t0136000-01);Similar to Hypersensitive-induced reaction protein 4. (Os06t0136000-02)
Sequence

ATGGTGAGCGCCTTCTTCCTGCTGTGCGGGTGCGTGGACCAGGCGAGCGTCGCGGTGGTG
GAGAAGTGGGGCCGCTTCCTCCGCCTCGCCGAGCCGGGCCTCCACTTCTTCAACCCGTTC
GCCGGCGAGTTCGTCGCCGGGACGCTCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTC
GAGACCAAGACCAAGGATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTT
GTTAAGGAACATGCTGATGATGCATTCTATGAGTTGCAGAATCCCCAACAGCAAATTCAG
GCCTACGTCTTTGATGTGGTCCGAGCTATAGTTCCGAGAATGAATCTTGATGATCTTTTT
GAGCAAAAGAATGATGTGGCGAAAGCTGTACTTCAGGAGCTAGAAAAGGTGATGGGAGAT
TATGGTTACAGCATTGAGCACATTCTCATGGTTGACATCATCCCTGATGCTGCTGTACGC
AGAGCAATGAATGAAATAAATGCAGCACAAAGGCTTCAGCTTGCAAGTGTCTACAAAGGA
GAGGCGGAGAAGATTCTTCTGGTGAAGAAAGCAGAAGCAGAGGCAGAGGCAAAACACCTT
TCCGGTGTCGGCATTGCTAGACAGCGGCAGGCGATAACTGATGGCCTGAGAGAGAACATC
CTGAACTTCTCGCACTCGGTTTCAGGCACCTCAGCAAAAGAAGTCATGGATCTCATCATG
GTCACGCAGTACTTCGACACCATCAAAGAACTTGGGGATGGCTCGAAGAACACCACGGTG
TTCATACCTCATGGCCCAGGCCATGTCAGGGATATCAGCGAGCAAATCCGGAATGGTATG
ATGGAAGCGTCCTGCAGCAACGTGTAA

Peptide Sequence

PEP ID

Os06t0136000-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:1909695:1912980:-1 gene:Os06g0136000 transcript:Os06t0136000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hypersensitive-induced reaction protein 4. (Os06t0136000-01);Similar to Hypersensitive-induced reaction protein 4. (Os06t0136000-02)
Sequence

MVSAFFLLCGCVDQASVAVVEKWGRFLRLAEPGLHFFNPFAGEFVAGTLSTRVQSLDVRV
ETKTKDNVFVQLICTIQYRVVKEHADDAFYELQNPQQQIQAYVFDVVRAIVPRMNLDDLF
EQKNDVAKAVLQELEKVMGDYGYSIEHILMVDIIPDAAVRRAMNEINAAQRLQLASVYKG
EAEKILLVKKAEAEAEAKHLSGVGIARQRQAITDGLRENILNFSHSVSGTSAKEVMDLIM
VTQYFDTIKELGDGSKNTTVFIPHGPGHVRDISEQIRNGMMEASCSNV

Transcript Sequence

Transcript ID

Os06t0136000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:1909695:1912980:-1 gene:Os06g0136000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Hypersensitive-induced reaction protein 4. (Os06t0136000-01);Similar to Hypersensitive-induced reaction protein 4. (Os06t0136000-02)
Sequence

GGGGCGTCCAAATCCGCCGCCGAATTCCCCACCCGTCGCGTCCAAAATCCAAATCCGCCG
CCGCGATCGAGGCCGACGAGGAGAGGTTGAGGTTGAGGTGAGAGCCATGGTGAGCGCCTT
CTTCCTGCTGTGCGGGTGCGTGGACCAGGCGAGCGTCGCGGTGGTGGAGAAGTGGGGCCG
CTTCCTCCGCCTCGCCGAGCCGGGCCTCCACTTCTTCAACCCGTTCGCCGGCGAGTTCGT
CGCCGGGACGCTCTCCACCCGCGTCCAGTCGCTCGACGTCCGCGTCGAGACCAAGACCAA
GGATAATGTCTTTGTTCAGCTTATCTGCACAATCCAATATCGGGTTGTTAAGGAACATGC
TGATGATGCATTCTATGAGTTGCAGAATCCCCAACAGCAAATTCAGGCCTACGTCTTTGA
TGTGGTCCGAGCTATAGTTCCGAGAATGAATCTTGATGATCTTTTTGAGCAAAAGAATGA
TGTGGCGAAAGCTGTACTTCAGGAGCTAGAAAAGGTGATGGGAGATTATGGTTACAGCAT
TGAGCACATTCTCATGGTTGACATCATCCCTGATGCTGCTGTACGCAGAGCAATGAATGA
AATAAATGCAGCACAAAGGCTTCAGCTTGCAAGTGTCTACAAAGGAGAGGCGGAGAAGAT
TCTTCTGGTGAAGAAAGCAGAAGCAGAGGCAGAGGCAAAACACCTTTCCGGTGTCGGCAT
TGCTAGACAGCGGCAGGCGATAACTGATGGCCTGAGAGAGAACATCCTGAACTTCTCGCA
CTCGGTTTCAGGCACCTCAGCAAAAGAAGTCATGGATCTCATCATGGTCACGCAGTACTT
CGACACCATCAAAGAACTTGGGGATGGCTCGAAGAACACCACGGTGTTCATACCTCATGG
CCCAGGCCATGTCAGGGATATCAGCGAGCAAATCCGGAATGGTATGATGGAAGCGTCCTG
CAGCAACGTGTAAATCGGTATCGAATGCGGAACCAAGGTTGGGGGTGGTTCAGATGGGAG
GTCCTGTTTATAGTGAATAGTACGAATGAATGCTAGTAGCATGTGTTGTTTGCACGCGCG
CCCTGGAGTTGTATGCAGTGGTAGATAGAGTTCGAGTTTTGGCATAATAATATTGTCTGA
ATTTTATGTAAAAGAAAATCACATGTCTTCCTTTTGTGAGTTAAAAGTTGCACCGATTTA
TGCATGGC