Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0135900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:1900868:1908946:-1 gene:Os06g0135900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sec1p-like protein 2 (Fragment). (Os06t0135900-01)
Sequence	ATGTCGATGTCGGGGTCGGACTTCGGCGCCCCGTGCGACGACCCCAAGATCTTCCGCAAC ATCTGCCGGGATCGTATACTCAAGGACTTGCTGCAGCCGGACAAAGATAAGGAGACCAAA AGCTCATGGAAGGTTCTTATCATGGACAAATTTACGGTGAGGATCATGGCTTATGCCTGC AAGATGGCAGAAATTACCGATGCAGGAATCTCGTTGGTTGAAGATCTTTTCAAGCGAAGG GAGCCCATGCCTTCCATGGATGCAATCTACTTCCTCCAGCCACTGAAAGAAAATGTCATA ATGCTTCTATCTGACATGTCTGGGAGATGTCCACTGTACAGGAAGGCATACATATTCTTT AGTTCACCGATTCCTAAGGAGCTGGTCTCTTACATAAAGAACGACAGCAGTGTGATACCA CGTATTGGTGCACTAAGAGAGATGAATTTGGAGTTCTTTGCAATTGACATGCAGGGATTC ACAACTGACCATGACATGGCATTCACTGATTTATATAGTGCTCAGCACAACTCGAAAAAG TTCAATGACACTATAAGCACTATGGCTACTCGCATTGCTACCACATTTGCTTCGTTGAAG GAATTTCCTTGTGTGCGGTATCGTGCCCCAAAGGGCACAGATCCAATGACAACACCAAAA TTTGACATGGTTCCAAAATGGTTAGCGACTGCTGTTTGGGATATTGTGTCAAAATATAAA TCAACAATACCTGAATTTCCCCAGAAGGAGACATGTGAACTGCTCATTGTCGACAGGCCT ATAGATCAGATAGCACCTGTTATTCATGAATGGACCTATGATGCAATGTGCCATGATCTA CTTGAAATGGATGGCCAAAAATACATATATGAGGTGTCGAAAGCGGGATCAGAACCTGAG AGAAAGGAGGCTTTATTGGAGGATCATGATCCTCTCTGGGTTGAGCTTCGCCACATTCAC ATAGCTGATGCTAGTGAGAGGTTGTATGATAAGATGAATAACTTTGTTTCAAAGAATAAA GCAGCTCAACTTCATTCAAGAGATGGTGGTGAAATTTCTACAAAGGATCTGCAGAAGATC GTTCAAGCTTTGCCACAATACGGTGAACAAGTTGAGAAATTGACCCTCCATATAGAGATT GCTGGAAAAATCAACAAGTTTATCAGAGAGTATGGTCTCCGTGACATTGGGCAGGTGGAG CAGGATCTAGTTTTTGGAGATGCAGCAGCCAAGGAGGTGATCAGTATCCTCAGGTCAAAG CAGGATATGAGCCCAGAAAACAAATTGAGGTTGCTTATTATATATGCAATTGTATATCCA GAGAAGTTTGAAGGTGACAAAGGGGAAAAGTTGATGCAGCTAGCAAAACTGCCACATGAT GAGATGGATGCCATAAATAGTTTAAGATACTTGGTTGGTTCAGATACAAAAAAGGCATCA CGGCCTGGCGGCTTCTCTCTCAAATTTGATGCACAAAAGAAAAAAAATGCTGCGAGGACA GAACGGCAGGATGGCGATGAAACCTGGGCATTATCACGTTTTTTCCCACTTATAGAGGCA TTTGATTGA

Peptide Sequence

PEP ID	Os06t0135900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:1900868:1908946:-1 gene:Os06g0135900 transcript:Os06t0135900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sec1p-like protein 2 (Fragment). (Os06t0135900-01)
Sequence	MSMSGSDFGAPCDDPKIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYAC KMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFF SSPIPKELVSYIKNDSSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKK FNDTISTMATRIATTFASLKEFPCVRYRAPKGTDPMTTPKFDMVPKWLATAVWDIVSKYK STIPEFPQKETCELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEVSKAGSEPE RKEALLEDHDPLWVELRHIHIADASERLYDKMNNFVSKNKAAQLHSRDGGEISTKDLQKI VQALPQYGEQVEKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSK QDMSPENKLRLLIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKAS RPGGFSLKFDAQKKKNAARTERQDGDETWALSRFFPLIEAFD

Transcript Sequence

Transcript ID	Os06t0135900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1900868:1908946:-1 gene:Os06g0135900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Sec1p-like protein 2 (Fragment). (Os06t0135900-01)
Sequence	GGAGAGGAGTGGAGGTAGAGGGGATCAACTCCGGTCGGCGGCGGGATGTCGATGTCGGGG TCGGACTTCGGCGCCCCGTGCGACGACCCCAAGATCTTCCGCAACATCTGCCGGGATCGT ATACTCAAGGACTTGCTGCAGCCGGACAAAGATAAGGAGACCAAAAGCTCATGGAAGGTT CTTATCATGGACAAATTTACGGTGAGGATCATGGCTTATGCCTGCAAGATGGCAGAAATT ACCGATGCAGGAATCTCGTTGGTTGAAGATCTTTTCAAGCGAAGGGAGCCCATGCCTTCC ATGGATGCAATCTACTTCCTCCAGCCACTGAAAGAAAATGTCATAATGCTTCTATCTGAC ATGTCTGGGAGATGTCCACTGTACAGGAAGGCATACATATTCTTTAGTTCACCGATTCCT AAGGAGCTGGTCTCTTACATAAAGAACGACAGCAGTGTGATACCACGTATTGGTGCACTA AGAGAGATGAATTTGGAGTTCTTTGCAATTGACATGCAGGGATTCACAACTGACCATGAC ATGGCATTCACTGATTTATATAGTGCTCAGCACAACTCGAAAAAGTTCAATGACACTATA AGCACTATGGCTACTCGCATTGCTACCACATTTGCTTCGTTGAAGGAATTTCCTTGTGTG CGGTATCGTGCCCCAAAGGGCACAGATCCAATGACAACACCAAAATTTGACATGGTTCCA AAATGGTTAGCGACTGCTGTTTGGGATATTGTGTCAAAATATAAATCAACAATACCTGAA TTTCCCCAGAAGGAGACATGTGAACTGCTCATTGTCGACAGGCCTATAGATCAGATAGCA CCTGTTATTCATGAATGGACCTATGATGCAATGTGCCATGATCTACTTGAAATGGATGGC CAAAAATACATATATGAGGTGTCGAAAGCGGGATCAGAACCTGAGAGAAAGGAGGCTTTA TTGGAGGATCATGATCCTCTCTGGGTTGAGCTTCGCCACATTCACATAGCTGATGCTAGT GAGAGGTTGTATGATAAGATGAATAACTTTGTTTCAAAGAATAAAGCAGCTCAACTTCAT TCAAGAGATGGTGGTGAAATTTCTACAAAGGATCTGCAGAAGATCGTTCAAGCTTTGCCA CAATACGGTGAACAAGTTGAGAAATTGACCCTCCATATAGAGATTGCTGGAAAAATCAAC AAGTTTATCAGAGAGTATGGTCTCCGTGACATTGGGCAGGTGGAGCAGGATCTAGTTTTT GGAGATGCAGCAGCCAAGGAGGTGATCAGTATCCTCAGGTCAAAGCAGGATATGAGCCCA GAAAACAAATTGAGGTTGCTTATTATATATGCAATTGTATATCCAGAGAAGTTTGAAGGT GACAAAGGGGAAAAGTTGATGCAGCTAGCAAAACTGCCACATGATGAGATGGATGCCATA AATAGTTTAAGATACTTGGTTGGTTCAGATACAAAAAAGGCATCACGGCCTGGCGGCTTC TCTCTCAAATTTGATGCACAAAAGAAAAAAAATGCTGCGAGGACAGAACGGCAGGATGGC GATGAAACCTGGGCATTATCACGTTTTTTCCCACTTATAGAGGCATTTGATTGAGAAACT GAGCAAAGGTGCATTACCTTTGAATGAATACCCATCCATGAGTGAACCCAGTTCCACTGA ACAAGGATCTACACAAAGTGCAGCCGCGACTAAACCAGCACAAGCACAACCCATGTCCAG GAGATCGCGGCGGACACCAACCTGGGCTAAGTCTCGAAACTCTGATGATAGTCAATCAAG TGACTCCTCGGTCTTGAGACATGGATCTAATGACTTCAAGAGGCTAGGCAACCGAATTTT TGTCTTCATGATTGGTGGAGCCACTAGATCGGAACTGCGGACGGTGCACAAGCTTACTAT GAAACTGAAGCGCGAAATTGTCCTGGGATCTTCTAGCATAGATGACCCTCCACAATTTAT TTCGAAGCTGAAGATGCTAACTGCAGGTGGTGCCAATGACGTCTAAACTTCGCACTTAGT TTGCAAATCAACCGATGAAACAAACTTGTCACCTTTTGGTAAGAAACCCATTGCTACGAA CAGTTAGAAACGTTGGATGTCATCAATGACTGGACTACTCACAATAATTACACGATTTTT TCATAGTCTAGTATATATACCAAGTGAGAAGAAGTGTCAAATGTACTTAAAACATGTATG TAGACAACATATTTTGCCCACATTATTTATTCTTCTTTCAGATGTAAAACGTAGAACAGT TGCGACAGTTGTTTTGCCCAAATTTGTATATTTATGAACACTACAACAATGACATGGTGA CGATTACACTCATGGATCAATCGATTCCGATAATTCGTCGTGAAATCGAGTTATTTATGG CGATGTGGAAAATGGTTATAGAGGTGCGAATGTGCGACTTTATAGGCTAGTTATAGATGT AAGTTCAATGTGTATCGTATCTGTCGAGTTTGTATAGTTTTTTTTTTAACCGAGCTATGA AATTTAATAATTC