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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0134000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:1820113:1822028:-1 gene:Os06g0134000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBOSOMAL PROTEIN S20 description:Similar to 40S ribosomal protein S20. (Os06t0134000-01)
Sequence

ATGGCGGCCGCCGACGTGGCGTACGCGCCGCCGATGAAGTCCGGCAAGATCGGCTTCGAG
AGCTCGCAGGAGGTGCAGCACAGGATCCGCATCACCCTCTCCTCCAAGAGCGTCAAGAAC
CTCGAGAAAGTCTGCGGTGATCTGGTGAAGGGAGCCAAGGACAAGAGCTTGAAGGTGAAG
GGCCCCGTGCGGATGCCCACCAAGGTGCTCCACATCACCACCAGGAAGTCTCCTTGTGGA
GAAGGTACCAACACCTGGGATCGGTTTGAGATGCGGGTGCACAAAAGGGTGATTGATCTT
GTCAGCTCTGCAGATGTTGTCAAGCAGATCACCTCAATCACCATTGAGCCAGGTGTGGAG
GTTGAAGTGACCATCAGCGACCAGTAA

Peptide Sequence

PEP ID

Os06t0134000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:1820113:1822028:-1 gene:Os06g0134000 transcript:Os06t0134000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBOSOMAL PROTEIN S20 description:Similar to 40S ribosomal protein S20. (Os06t0134000-01)
Sequence

MAAADVAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVK
GPVRMPTKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVE
VEVTISDQ

Transcript Sequence

Transcript ID

Os06t0134000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:1820113:1822028:-1 gene:Os06g0134000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBOSOMAL PROTEIN S20 description:Similar to 40S ribosomal protein S20. (Os06t0134000-01)
Sequence

GAAAACCTAGATCCCCATCTCGCGCCGCCACCTCTCCCCCTCCTCCATCCGCGAGGCGAA
ACCCTAGCCGAGGACCTCCTCCCCTTCCGCGCCAGCCATGGCGGCCGCCGACGTGGCGTA
CGCGCCGCCGATGAAGTCCGGCAAGATCGGCTTCGAGAGCTCGCAGGAGGTGCAGCACAG
GATCCGCATCACCCTCTCCTCCAAGAGCGTCAAGAACCTCGAGAAAGTCTGCGGTGATCT
GGTGAAGGGAGCCAAGGACAAGAGCTTGAAGGTGAAGGGCCCCGTGCGGATGCCCACCAA
GGTGCTCCACATCACCACCAGGAAGTCTCCTTGTGGAGAAGGTACCAACACCTGGGATCG
GTTTGAGATGCGGGTGCACAAAAGGGTGATTGATCTTGTCAGCTCTGCAGATGTTGTCAA
GCAGATCACCTCAATCACCATTGAGCCAGGTGTGGAGGTTGAAGTGACCATCAGCGACCA
GTAAAATGCTGCTATCCAACAGGTGGAGAAATTCGGTGAACAGGGTAGGGTATTTCAGAA
AGTTTTTAGCATGAGAACACTGGTGGAACAGAGTTTTTGTTCATCTATAGGCTCTCGGCG
GTTAATTCCGACCATCTGTTATCTAAGCTATCATAAATCTTGTGACTCATGTCTGTTCCA
ACATATGCTATAAATGAATGACTCGCTAAAGATCT