Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0133900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:1816266:1819747:1 gene:Os06g0133900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ENOLPYRUVYLSHIKIMATE PHOSPHATE SYNTHASE description:5-enolpyruvylshikimate-3-phosphate synthase (Os06t0133900-01)
Sequence	ATGGCGTCCAACGCCGCGGCTGCGGCGGCGGTGTCCCTGGACCAGGCCGTGGCGGCGTCG GCGGCGTTCTCGTCGCGGAAGCAGCTGCGGCTGCCCGCCGCGGCGCGCGGGGGGATGCGG GTGCGGGTGCGGGCGCGGGGGCGGCGGGAGGCGGTGGTGGTGGCGTCCGCGTCGTCGTCG TCGGTGGCAGCGCCGGCGGCGAAGGCGGAGGAGATCGTGCTCCAGCCCATCAGGGAGATC TCCGGGGCGGTTCAGCTGCCAGGGTCCAAGTCGCTCTCCAACAGGATCCTCCTCCTCTCC GCCCTCTCCGAGGGCACAACAGTGGTGGACAACTTGCTGAACAGTGAGGATGTTCACTAC ATGCTTGAGGCCCTGAAAGCCCTCGGGCTCTCTGTGGAAGCAGATAAAGTTGCAAAAAGA GCTGTAGTCGTTGGCTGTGGTGGCAAGTTTCCTGTTGAGAAGGATGCGAAAGAGGAAGTG CAACTCTTCTTGGGGAACGCTGGAACTGCAATGCGACCATTGACAGCAGCCGTGACTGCT GCTGGTGGAAATGCAACTTATGTGCTTGATGGAGTGCCACGAATGAGGGAGAGACCGATT GGTGACTTGGTTGTCGGGTTGAAACAACTTGGTGCGGATGTCGACTGTTTCCTTGGCACT GAATGCCCACCTGTTCGTGTCAAGGGAATTGGAGGACTTCCTGGTGGCAAGGTTAAGCTC TCTGGTTCCATCAGCAGTCAGTACTTGAGTGCCTTGCTGATGGCTGCTCCTTTGGCCCTT GGGGATGTGGAGATCGAAATCATTGACAAACTAATCTCCATTCCTTACGTTGAAATGACA TTGAGATTGATGGAGCGTTTTGGTGTGAAGGCAGAGCATTCTGATAGTTGGGACAGATTC TATATTAAGGGAGGGCAGAAGTACAAATCTCCTGGAAATGCCTATGTTGAAGGTGATGCC TCAAGCGCGAGCTATTTCTTGGCTGGTGCTGCAATCACTGGAGGCACTGTGACAGTTCAA GGTTGTGGTACGACCAGTTTGCAGGGTGATGTCAAATTTGCTGAGGTACTTGAGATGATG GGAGCAAAGGTTACATGGACTGACACCAGTGTAACCGTAACTGGTCCACCACGTGAGCCT TATGGGAAGAAACACCTGAAAGCTGTTGATGTCAACATGAACAAAATGCCTGATGTTGCC ATGACCCTTGCCGTTGTTGCACTCTTCGCTGATGGTCCAACTGCTATCAGAGATGTGGCT TCCTGGAGAGTAAAGGAAACCGAAAGGATGGTTGCAATTCGGACCGAGCTAACAAAGCTG GGAGCATCGGTTGAAGAAGGTCCTGACTACTGCATCATCACCCCACCGGAGAAGCTGAAC ATCACGGCAATCGACACCTACGATGATCACAGGATGGCCATGGCCTTCTCCCTCGCTGCC TGCGCCGACGTGCCCGTGACGATCAGGGACCCTGGTTGCACCCGCAAGACCTTCCCCAAC TACTTCGACGTTCTAAGCACTTTCGTCAGGAACTGA

Peptide Sequence

PEP ID	Os06t0133900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:1816266:1819747:1 gene:Os06g0133900 transcript:Os06t0133900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ENOLPYRUVYLSHIKIMATE PHOSPHATE SYNTHASE description:5-enolpyruvylshikimate-3-phosphate synthase (Os06t0133900-01)
Sequence	MASNAAAAAAVSLDQAVAASAAFSSRKQLRLPAAARGGMRVRVRARGRREAVVVASASSS SVAAPAAKAEEIVLQPIREISGAVQLPGSKSLSNRILLLSALSEGTTVVDNLLNSEDVHY MLEALKALGLSVEADKVAKRAVVVGCGGKFPVEKDAKEEVQLFLGNAGTAMRPLTAAVTA AGGNATYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTECPPVRVKGIGGLPGGKVKL SGSISSQYLSALLMAAPLALGDVEIEIIDKLISIPYVEMTLRLMERFGVKAEHSDSWDRF YIKGGQKYKSPGNAYVEGDASSASYFLAGAAITGGTVTVQGCGTTSLQGDVKFAEVLEMM GAKVTWTDTSVTVTGPPREPYGKKHLKAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVA SWRVKETERMVAIRTELTKLGASVEEGPDYCIITPPEKLNITAIDTYDDHRMAMAFSLAA CADVPVTIRDPGCTRKTFPNYFDVLSTFVRN

Transcript Sequence

Transcript ID	Os06t0133900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1816266:1819747:1 gene:Os06g0133900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ENOLPYRUVYLSHIKIMATE PHOSPHATE SYNTHASE description:5-enolpyruvylshikimate-3-phosphate synthase (Os06t0133900-01)
Sequence	ATGGCGGCGACCATGGCGTCCAACGCCGCGGCTGCGGCGGCGGTGTCCCTGGACCAGGCC GTGGCGGCGTCGGCGGCGTTCTCGTCGCGGAAGCAGCTGCGGCTGCCCGCCGCGGCGCGC GGGGGGATGCGGGTGCGGGTGCGGGCGCGGGGGCGGCGGGAGGCGGTGGTGGTGGCGTCC GCGTCGTCGTCGTCGGTGGCAGCGCCGGCGGCGAAGGCGGAGGAGATCGTGCTCCAGCCC ATCAGGGAGATCTCCGGGGCGGTTCAGCTGCCAGGGTCCAAGTCGCTCTCCAACAGGATC CTCCTCCTCTCCGCCCTCTCCGAGGGCACAACAGTGGTGGACAACTTGCTGAACAGTGAG GATGTTCACTACATGCTTGAGGCCCTGAAAGCCCTCGGGCTCTCTGTGGAAGCAGATAAA GTTGCAAAAAGAGCTGTAGTCGTTGGCTGTGGTGGCAAGTTTCCTGTTGAGAAGGATGCG AAAGAGGAAGTGCAACTCTTCTTGGGGAACGCTGGAACTGCAATGCGACCATTGACAGCA GCCGTGACTGCTGCTGGTGGAAATGCAACTTATGTGCTTGATGGAGTGCCACGAATGAGG GAGAGACCGATTGGTGACTTGGTTGTCGGGTTGAAACAACTTGGTGCGGATGTCGACTGT TTCCTTGGCACTGAATGCCCACCTGTTCGTGTCAAGGGAATTGGAGGACTTCCTGGTGGC AAGGTTAAGCTCTCTGGTTCCATCAGCAGTCAGTACTTGAGTGCCTTGCTGATGGCTGCT CCTTTGGCCCTTGGGGATGTGGAGATCGAAATCATTGACAAACTAATCTCCATTCCTTAC GTTGAAATGACATTGAGATTGATGGAGCGTTTTGGTGTGAAGGCAGAGCATTCTGATAGT TGGGACAGATTCTATATTAAGGGAGGGCAGAAGTACAAATCTCCTGGAAATGCCTATGTT GAAGGTGATGCCTCAAGCGCGAGCTATTTCTTGGCTGGTGCTGCAATCACTGGAGGCACT GTGACAGTTCAAGGTTGTGGTACGACCAGTTTGCAGGGTGATGTCAAATTTGCTGAGGTA CTTGAGATGATGGGAGCAAAGGTTACATGGACTGACACCAGTGTAACCGTAACTGGTCCA CCACGTGAGCCTTATGGGAAGAAACACCTGAAAGCTGTTGATGTCAACATGAACAAAATG CCTGATGTTGCCATGACCCTTGCCGTTGTTGCACTCTTCGCTGATGGTCCAACTGCTATC AGAGATGTGGCTTCCTGGAGAGTAAAGGAAACCGAAAGGATGGTTGCAATTCGGACCGAG CTAACAAAGCTGGGAGCATCGGTTGAAGAAGGTCCTGACTACTGCATCATCACCCCACCG GAGAAGCTGAACATCACGGCAATCGACACCTACGATGATCACAGGATGGCCATGGCCTTC TCCCTCGCTGCCTGCGCCGACGTGCCCGTGACGATCAGGGACCCTGGTTGCACCCGCAAG ACCTTCCCCAACTACTTCGACGTTCTAAGCACTTTCGTCAGGAACTGAACTGAGCTTTTA AAAGAGTGAGGTCTAGGTTCTGTTGTCTGTCTGTCCATCATCCATGTGTTGACTGTTGAG GGAACTCGTTTCTTCTTTTCTTCACGAGATGAGTTTTTGTGTGCCTGTAATACTAGTTTG TAGCAAAGGCTGCGTTACATAAGGTGATGAGAATTGAGGTAAAATGAGATCTGTACACTA AATTCATTCAGACTGTTTTGGCA