Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0133800-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:1808969:1812083:-1 gene:Os06g0133800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transketolase description:Similar to Transferase. (Os06t0133800-01);Similar to Transketolase, chloroplastic. (Os06t0133800-02)
Sequence	GTGCGCGCGGCGGCGGTCGAGACGCTCGAGGGGCAGGCGGCGACGGGGGCGCTGCTCGAG AAGTCGGTGAACACGATCCGGTTCCTCGCCATCGACGCCGTCGAGAAGGCCAACTCGGGG CACCCCGGCCTGCCCATGGGGTGCGCGCCCATGGGGCACATCCTCTACGACGAGGTCATG CGGTACAACCCCAAGAACCCCTACTGGTTCAACCGCGACCGCTTCATCCTCTCCGCCGGC CACGGCTGCATGCTCCAGTACGCCCTGCTCCACCTCGCCGGCTACGACGCCGTCTTGGAG GAGGACTTGAAGCAATTCAGGCAATGGGGAAGCAAGACTCCAGGCCATCCCGAGAACTTC GAGACGCCCGGAGTTGAAGTTACCACTGGACCTCTTGGTCAGGGTATTGCAAATGCAGTT GGGCTGGCCCTTGCTGAGAAGCACCTGGCTGCTCGTTTCAACAAGCCCGACAGCGAGATT GTTGATCACTACACCTACTGTATTTTGGGAGATGGGTGCCAGATGGAGGGTATCTCCAAT GAAGCTTGCTCGTTGGCTGGCCATTGGGGTCTTGGCAAGCTGATTGCATTCTATGATGAC AACCACATTTCCATTGACGGAGACACAGAGATTGCATTCACTGAGGATGTGAGTGCTCGC TTTGAGGCTCTTGGGTGGCATACAATCTGGGTTAAGAATGGAAACGATGGCTATGATGAG ATTCGTGCCGCCATTAAGGAAGCAAAGGCGGTAACTGACAAGCCAACACTAATCAAGGTG ACCACCACAATCGGTTTTGGATCACCCAACAAGGCCAACTCATACAGCGTCCACGGAAGT GCTTTGGGTACCAAAGAGGTTGAAGCAACCAGAGAGAACCTTGGATGGCCCTATGAGCCA TTCTTTGTGCCTGAGGATGTGAAGAGCCACTGGAGCCGCCATGTGCCTCAAGGTGCTGCT TTTGAGGCTGACTGGAATGCTAAGTTCGCCGAGTATGAGAAGAAGTACCCAGAAGATGCA GCGACCTTGAAGAGCATTGTCTCAGGGGAGTTGCCTGCTGGCTGGGCTGACGCTCTTCCT AAATACACTCCAGAGAGCCCTGCAGATGCCACCAGGAATCTGTCACAGCAGTGCTTAAAC GCACTTGCTAAAGTTGTTCCTGGTCTTCTTGGAGGAAGTGCTGATCTTGCATCCTCCAAC ATGACATTGCTTAAGATGTTCGGTGACTTCCAGAAGGATACGCCTGAGGAGCGCAATGTC CGATTTGGAGTCAGGGAGCATGGAATGGGCGCCATTTGCAACGGCATTGCTCTGCACAGC CCAGGACTCATTCCATACTGTGCTACTTTCTTTGTTTTCACTGATTACATGAGAGCTGCC ATGAGGATCTCAGCCTTGTGTGAAGCCGGAGTTATCTATGTTATGACCCATGACTCTATT GGTCTTGGAGAAGATGGTCCAACCCATCAGCCCATTGAGCACTTGGTGAGCTTCCGTGCG ATGCCCAACATTCTGATGCTTCGTCCTGCTGATGGTAACGAGACTGCTGGGGCATACAAA ATCGCGGTCCTCAACAGGAAGAGGCCATCCGTCCTTGCTCTCTCCAGGCAAAAGCTTGCT CAGCTGCCTGGTACCTCGATTGAGGGTGTTGAGAAGGGTGGGTACATCGTCTCTGACAAC TCAACTGGCAACAAGCCTGACTTCATTGTGATGAGCACTGGCTCTGAACTAGAGATTGTC GCCAAGGCTGCTGATGAGTTGAGGAAGGAGGGGAAGACTGTCCGTGTCGTGTCATTTGTT TGCTGGGAGCTTTTCGATGAACAGTCGGCTGAGTACAAGGAGAGTGTTCTCCCTGAGGCT GTTACTGCAAGAGTCAGCCTTGAAGCAGGGTCTACTCTTGGATGGCAGAAGTACGTCGGA AGCAAAGGCAAGGCTATTGGCATCGACAAATTCGGTGCAAGTGCTCCTGCTGGAAAGATC TACCAGGAGTATGGCATCACCGCGGAGAACGTCATCGCAACAGCAAAGAGCCTGTAA

Peptide Sequence

PEP ID	Os06t0133800-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:1808969:1812083:-1 gene:Os06g0133800 transcript:Os06t0133800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transketolase description:Similar to Transferase. (Os06t0133800-01);Similar to Transketolase, chloroplastic. (Os06t0133800-02)
Sequence	VRAAAVETLEGQAATGALLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVM RYNPKNPYWFNRDRFILSAGHGCMLQYALLHLAGYDAVLEEDLKQFRQWGSKTPGHPENF ETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDSEIVDHYTYCILGDGCQMEGISN EACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTEDVSARFEALGWHTIWVKNGNDGYDE IRAAIKEAKAVTDKPTLIKVTTTIGFGSPNKANSYSVHGSALGTKEVEATRENLGWPYEP FFVPEDVKSHWSRHVPQGAAFEADWNAKFAEYEKKYPEDAATLKSIVSGELPAGWADALP KYTPESPADATRNLSQQCLNALAKVVPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNV RFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAMRISALCEAGVIYVMTHDSI GLGEDGPTHQPIEHLVSFRAMPNILMLRPADGNETAGAYKIAVLNRKRPSVLALSRQKLA QLPGTSIEGVEKGGYIVSDNSTGNKPDFIVMSTGSELEIVAKAADELRKEGKTVRVVSFV CWELFDEQSAEYKESVLPEAVTARVSLEAGSTLGWQKYVGSKGKAIGIDKFGASAPAGKI YQEYGITAENVIATAKSL

Transcript Sequence

Transcript ID	Os06t0133800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1808969:1812083:-1 gene:Os06g0133800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Transketolase description:Similar to Transferase. (Os06t0133800-01);Similar to Transketolase, chloroplastic. (Os06t0133800-02)
Sequence	GTGCGCGCGGCGGCGGTCGAGACGCTCGAGGGGCAGGCGGCGACGGGGGCGCTGCTCGAG AAGTCGGTGAACACGATCCGGTTCCTCGCCATCGACGCCGTCGAGAAGGCCAACTCGGGG CACCCCGGCCTGCCCATGGGGTGCGCGCCCATGGGGCACATCCTCTACGACGAGGTCATG CGGTACAACCCCAAGAACCCCTACTGGTTCAACCGCGACCGCTTCATCCTCTCCGCCGGC CACGGCTGCATGCTCCAGTACGCCCTGCTCCACCTCGCCGGCTACGACGCCGTCTTGGAG GAGGACTTGAAGCAATTCAGGCAATGGGGAAGCAAGACTCCAGGCCATCCCGAGAACTTC GAGACGCCCGGAGTTGAAGTTACCACTGGACCTCTTGGTCAGGGTATTGCAAATGCAGTT GGGCTGGCCCTTGCTGAGAAGCACCTGGCTGCTCGTTTCAACAAGCCCGACAGCGAGATT GTTGATCACTACACCTACTGTATTTTGGGAGATGGGTGCCAGATGGAGGGTATCTCCAAT GAAGCTTGCTCGTTGGCTGGCCATTGGGGTCTTGGCAAGCTGATTGCATTCTATGATGAC AACCACATTTCCATTGACGGAGACACAGAGATTGCATTCACTGAGGATGTGAGTGCTCGC TTTGAGGCTCTTGGGTGGCATACAATCTGGGTTAAGAATGGAAACGATGGCTATGATGAG ATTCGTGCCGCCATTAAGGAAGCAAAGGCGGTAACTGACAAGCCAACACTAATCAAGGTG ACCACCACAATCGGTTTTGGATCACCCAACAAGGCCAACTCATACAGCGTCCACGGAAGT GCTTTGGGTACCAAAGAGGTTGAAGCAACCAGAGAGAACCTTGGATGGCCCTATGAGCCA TTCTTTGTGCCTGAGGATGTGAAGAGCCACTGGAGCCGCCATGTGCCTCAAGGTGCTGCT TTTGAGGCTGACTGGAATGCTAAGTTCGCCGAGTATGAGAAGAAGTACCCAGAAGATGCA GCGACCTTGAAGAGCATTGTCTCAGGGGAGTTGCCTGCTGGCTGGGCTGACGCTCTTCCT AAATACACTCCAGAGAGCCCTGCAGATGCCACCAGGAATCTGTCACAGCAGTGCTTAAAC GCACTTGCTAAAGTTGTTCCTGGTCTTCTTGGAGGAAGTGCTGATCTTGCATCCTCCAAC ATGACATTGCTTAAGATGTTCGGTGACTTCCAGAAGGATACGCCTGAGGAGCGCAATGTC CGATTTGGAGTCAGGGAGCATGGAATGGGCGCCATTTGCAACGGCATTGCTCTGCACAGC CCAGGACTCATTCCATACTGTGCTACTTTCTTTGTTTTCACTGATTACATGAGAGCTGCC ATGAGGATCTCAGCCTTGTGTGAAGCCGGAGTTATCTATGTTATGACCCATGACTCTATT GGTCTTGGAGAAGATGGTCCAACCCATCAGCCCATTGAGCACTTGGTGAGCTTCCGTGCG ATGCCCAACATTCTGATGCTTCGTCCTGCTGATGGTAACGAGACTGCTGGGGCATACAAA ATCGCGGTCCTCAACAGGAAGAGGCCATCCGTCCTTGCTCTCTCCAGGCAAAAGCTTGCT CAGCTGCCTGGTACCTCGATTGAGGGTGTTGAGAAGGGTGGGTACATCGTCTCTGACAAC TCAACTGGCAACAAGCCTGACTTCATTGTGATGAGCACTGGCTCTGAACTAGAGATTGTC GCCAAGGCTGCTGATGAGTTGAGGAAGGAGGGGAAGACTGTCCGTGTCGTGTCATTTGTT TGCTGGGAGCTTTTCGATGAACAGTCGGCTGAGTACAAGGAGAGTGTTCTCCCTGAGGCT GTTACTGCAAGAGTCAGCCTTGAAGCAGGGTCTACTCTTGGATGGCAGAAGTACGTCGGA AGCAAAGGCAAGGCTATTGGCATCGACAAATTCGGTGCAAGTGCTCCTGCTGGAAAGATC TACCAGGAGTATGGCATCACCGCGGAGAACGTCATCGCAACAGCAAAGAGCCTGTAAGAT TCAAACCGCGCGTTTTGAGTTTTTGTCATCGTTGATGCCAAGGAACAGTATACATGAAGC CATGAAGGTCTTGTGCCCAAAGCTTGGAATAATGAAGGGAGAGGGATGCCTGCATTGGAG CGTGAGTGGTATTTTAGGCCTGTAATAAGCACTGCTTTTCCATTTACGTTTGTTTTGTTG GATCACTCCTTAGATGATTCATCAAGTTGAGCCTGATTCAATTGGGGACTGGTTTTGGT