Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0133000-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:1766470:1770653:1 gene:Os06g0133000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTINOUS ENDOSPERM description:Granule-bound starch synthase I, chloroplast precursor (EC 2.4.1.21). (Os06t0133000-01);Granule-bound starch synthase 1, Starch biosynthesis (Os06t0133000-02)
Sequence	ATGTCGGCTCTCACCACGTCCCAGCTCGCCACCTCGGCCACCGGCTTCGGCATCGCCGAC AGGTCGGCGCCGTCGTCGCTGCTCCGCCACGGGTTCCAGGGCCTCAAGCCCCGCAGCCCC GCCGGCGGCGACGCGACGTCGCTCAGCGTGACGACCAGCGCGCGCGCGACGCCCAAGCAG CAGCGGTCGGTGCAGCGTGGCAGCCGGAGGTTCCCCTCCGTCGTCGTGTACGCCACCGGC GCCGGCATGAACGTCGTGTTCGTCGGCGCCGAGATGGCCCCCTGGAGCAAGACCGGCGGC CTCGGTGACGTCCTCGGTGGCCTCCCCCCTGCCATGGCTGCGAATGGCCACAGGGTCATG GTGATCTCTCCTCGGTACGACCAGTACAAGGACGCTTGGGATACCAGCGTTGTGGCTGAG ATCAAGGTTGCAGACAGGTACGAGAGGGTGAGGTTTTTCCATTGCTACAAGCGTGGAGTC GACCGTGTGTTCATCGACCATCCGTCATTCCTGGAGAAGGTTTGGGGAAAGACCGGTGAG AAGATCTACGGACCTGACACTGGAGTTGATTACAAAGACAACCAGATGCGTTTCAGCCTT CTTTGCCAGGCAGCACTCGAGGCTCCTAGGATCCTAAACCTCAACAACAACCCATACTTC AAAGGAACTTATGGTGAGGATGTTGTGTTCGTCTGCAACGACTGGCACACTGGCCCACTG GCGAGCTACCTGAAGAACAACTACCAGCCCAATGGCATCTACAGGAATGCAAAGGTTGCT TTCTGCATCCACAACATCTCCTACCAGGGCCGTTTCGCTTTCGAGGATTACCCTGAGCTG AACCTCTCCGAGAGGTTCAGGTCATCCTTCGATTTCATCGACGGGTATGACACGCCGGTG GAGGGCAGGAAGATCAACTGGATGAAGGCCGGAATCCTGGAAGCCGACAGGGTGCTCACC GTGAGCCCGTACTACGCCGAGGAGCTCATCTCCGGCATCGCCAGGGGATGCGAGCTCGAC AACATCATGCGGCTCACCGGCATCACCGGCATCGTCAACGGCATGGACGTCAGCGAGTGG GATCCTAGCAAGGACAAGTACATCACCGCCAAGTACGACGCAACCACGGCAATCGAGGCG AAGGCGCTGAACAAGGAGGCGTTGCAGGCGGAGGCGGGTCTTCCGGTCGACAGGAAAATC CCACTGATCGCGTTCATCGGCAGGCTGGAGGAACAGAAGGGCCCTGACGTCATGGCCGCC GCCATCCCGGAGCTCATGCAGGAGGACGTCCAGATCGTTCTTCTGGGTACTGGAAAGAAG AAGTTCGAGAAGCTGCTCAAGAGCATGGAGGAGAAGTATCCGGGCAAGGTGAGGGCCGTG GTGAAGTTCAACGCGCCGCTTGCTCATCTCATCATGGCCGGAGCCGACGTGCTCGCCGTC CCCAGCCGCTTCGAGCCCTGTGGACTCATCCAGCTGCAGGGGATGAGATACGGAACGCCC TGTGCTTGCGCGTCCACCGGTGGGCTCGTGGACACGGTCATCGAAGGCAAGACTGGTTTC CACATGGGCCGTCTCAGCGTCGACTGCAAGGTGGTGGAGCCAAGCGACGTGAAGAAGGTG GCGGCCACCCTGAAGCGCGCCATCAAGGTCGTCGGCACGCCGGCGTACGAGGAGATGGTC AGGAACTGCATGAACCAGGACCTCTCCTGGAAGGGGCCTGCGAAGAACTGGGAGAATGTG CTCCTGGGCCTGGGCGTCGCCGGCAGCGCGCCGGGGATCGAAGGCGACGAGATCGCGCCG CTCGCCAAGGAGAACGTGGCTGCTCCTTGA

Peptide Sequence

PEP ID	Os06t0133000-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:1766470:1770653:1 gene:Os06g0133000 transcript:Os06t0133000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTINOUS ENDOSPERM description:Granule-bound starch synthase I, chloroplast precursor (EC 2.4.1.21). (Os06t0133000-01);Granule-bound starch synthase 1, Starch biosynthesis (Os06t0133000-02)
Sequence	MSALTTSQLATSATGFGIADRSAPSSLLRHGFQGLKPRSPAGGDATSLSVTTSARATPKQ QRSVQRGSRRFPSVVVYATGAGMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVM VISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGE KIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPL ASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPV EGRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEW DPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAA AIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAV PSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKV AATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAP LAKENVAAP

Transcript Sequence

Transcript ID	Os06t0133000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1766470:1770653:1 gene:Os06g0133000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GLUTINOUS ENDOSPERM description:Granule-bound starch synthase I, chloroplast precursor (EC 2.4.1.21). (Os06t0133000-01);Granule-bound starch synthase 1, Starch biosynthesis (Os06t0133000-02)
Sequence	GAATTCAGTGTGAAGGAATAGATTCTCTTCAAAACAATTTAATCATTCATCTGATCTGCT CAAAGCTCTGTGCATCTCCGGGTGCAACGGCCAGGATATTTATTGTGCAGTAAAAAAATG TCATATCCCCTAGCCACCCAAGAAACTGCTCCTTAAGTCCTTATAAGCACATATGGCATT GTAATATATATGTTTGAGTTTTAGCGACAATTTTTTTAAAAACTTTTGGTCCTTTTTATG AACGTTTTAAGTTTCACTGTCTTTTTTTTTCGAATTTTAAATGTAGCTTCAAATTCTAAT CCCCAATCCAAATTGTAATAAACTTCAATTCTCCTAATTAACATCTTAATTCATTTATTT GAAAACCAGTTCAAATTCTTTTAGGCTCACCAAACCTTAAACAATTCAATTCAGTGCAGA GATCTTCCACAGCAACAGCTAGACAACCACCATGTCGGCTCTCACCACGTCCCAGCTCGC CACCTCGGCCACCGGCTTCGGCATCGCCGACAGGTCGGCGCCGTCGTCGCTGCTCCGCCA CGGGTTCCAGGGCCTCAAGCCCCGCAGCCCCGCCGGCGGCGACGCGACGTCGCTCAGCGT GACGACCAGCGCGCGCGCGACGCCCAAGCAGCAGCGGTCGGTGCAGCGTGGCAGCCGGAG GTTCCCCTCCGTCGTCGTGTACGCCACCGGCGCCGGCATGAACGTCGTGTTCGTCGGCGC CGAGATGGCCCCCTGGAGCAAGACCGGCGGCCTCGGTGACGTCCTCGGTGGCCTCCCCCC TGCCATGGCTGCGAATGGCCACAGGGTCATGGTGATCTCTCCTCGGTACGACCAGTACAA GGACGCTTGGGATACCAGCGTTGTGGCTGAGATCAAGGTTGCAGACAGGTACGAGAGGGT GAGGTTTTTCCATTGCTACAAGCGTGGAGTCGACCGTGTGTTCATCGACCATCCGTCATT CCTGGAGAAGGTTTGGGGAAAGACCGGTGAGAAGATCTACGGACCTGACACTGGAGTTGA TTACAAAGACAACCAGATGCGTTTCAGCCTTCTTTGCCAGGCAGCACTCGAGGCTCCTAG GATCCTAAACCTCAACAACAACCCATACTTCAAAGGAACTTATGGTGAGGATGTTGTGTT CGTCTGCAACGACTGGCACACTGGCCCACTGGCGAGCTACCTGAAGAACAACTACCAGCC CAATGGCATCTACAGGAATGCAAAGGTTGCTTTCTGCATCCACAACATCTCCTACCAGGG CCGTTTCGCTTTCGAGGATTACCCTGAGCTGAACCTCTCCGAGAGGTTCAGGTCATCCTT CGATTTCATCGACGGGTATGACACGCCGGTGGAGGGCAGGAAGATCAACTGGATGAAGGC CGGAATCCTGGAAGCCGACAGGGTGCTCACCGTGAGCCCGTACTACGCCGAGGAGCTCAT CTCCGGCATCGCCAGGGGATGCGAGCTCGACAACATCATGCGGCTCACCGGCATCACCGG CATCGTCAACGGCATGGACGTCAGCGAGTGGGATCCTAGCAAGGACAAGTACATCACCGC CAAGTACGACGCAACCACGGCAATCGAGGCGAAGGCGCTGAACAAGGAGGCGTTGCAGGC GGAGGCGGGTCTTCCGGTCGACAGGAAAATCCCACTGATCGCGTTCATCGGCAGGCTGGA GGAACAGAAGGGCCCTGACGTCATGGCCGCCGCCATCCCGGAGCTCATGCAGGAGGACGT CCAGATCGTTCTTCTGGGTACTGGAAAGAAGAAGTTCGAGAAGCTGCTCAAGAGCATGGA GGAGAAGTATCCGGGCAAGGTGAGGGCCGTGGTGAAGTTCAACGCGCCGCTTGCTCATCT CATCATGGCCGGAGCCGACGTGCTCGCCGTCCCCAGCCGCTTCGAGCCCTGTGGACTCAT CCAGCTGCAGGGGATGAGATACGGAACGCCCTGTGCTTGCGCGTCCACCGGTGGGCTCGT GGACACGGTCATCGAAGGCAAGACTGGTTTCCACATGGGCCGTCTCAGCGTCGACTGCAA GGTGGTGGAGCCAAGCGACGTGAAGAAGGTGGCGGCCACCCTGAAGCGCGCCATCAAGGT CGTCGGCACGCCGGCGTACGAGGAGATGGTCAGGAACTGCATGAACCAGGACCTCTCCTG GAAGGGGCCTGCGAAGAACTGGGAGAATGTGCTCCTGGGCCTGGGCGTCGCCGGCAGCGC GCCGGGGATCGAAGGCGACGAGATCGCGCCGCTCGCCAAGGAGAACGTGGCTGCTCCTTG AAGAGCCTGAGATCTACATATGGAGTGATTAATTAATATAGCAGTATATGGATGAGAGAC GAATGAACCAGTGGTTTGTTTGTTGTAGTGAATTTGTAGCTATAGCCAATTATATAGGCT AATAAGTTTGATGTTGTACTCTTCTGGGTGTGCTTAAGTATCTTATCGGACCCTGAATTT ATGTGTGTGGCTTATTGCCAATAATATTAAGTAATAAAGGGTTTATTATATTATTATATA TGTTATATTATACT