Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0130600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:1636572:1640852:-1 gene:Os06g0130600 gene_biotype:protein_coding transcript_biotype:protein_coding description:GAGA binding-like family protein. (Os06t0130600-01)
Sequence	ATGGACAACCTTGGCCATAGAGAAAATGGGAGGCAAAGGCCAGACCAATATAAAGGACTT CATACCCAGTGGATGATGCCCCAGACCCAAAGGCATCTGAAGGACCATCAAAGTATGAAT CTCTTGGCACTGATGAATGATAGAGATAATGCCATCCGAGAAAGGGACCATGCTCTGGCT GAGAAGAAGGCAGCCATAGCTGAGCGCGATATGGCGTTTACTCAACGGGATGCTGCAATG GCTGAGCGTAATGCTGCAGTCGTGGAAAGGGACAATGCCCTTGCTGCTCTTGAGTTAGCA CGTACAAACGGATTGAACATGAATAACGGGAATGGATTCCCCCAAGGATCTCTCAGCGGA TCAAAGAACATCCACCACCACGACCAGCTTTCTCATGCTCAGTCATCACCGCTGCAACTG GCAGATTCTCCATATGATCATGCTAGAGAAATGCACATATCAGAAGCATACCCTATCTCA ACAGCTCCAGGGAGTGCTGGAAAAGCAAAGAGGCCAAAGAAGAATAGTTCCCAAGCCTCT CCATTGAAGAGGCCATCAGGTGTGCTCCGGAAAACCAAGAAACCTTCTGGTGACTGGAAG AATGTCGGGATGTCTGGTTGTGGAGATGATTCTGCTCATGCTTCTGTGATGAAGAACGAG TGGAAGGACCAAAACCTTGGTCTGAATCAAGTTGCGTTTGATGATTCCACGATGCCCGCG CCTGCCTGTTCATGCACGGGGAAGCTTCGCCAATGCTACAAGTGGGGAAACGGGGGATGG CAATCATCATGTTGCACCATGAACATTTCCATGTACCCACTCCCAGTGATGCCGAACAAG CGGCATGCTCGCATGGGGGGACGGAAGATGAGCGGCGGTGCCTTCACAAAGCTGCTGAGC CGACTAGCGGCCGAAGGTCATGATCTCTCGACGCCGGTCGACCTCAAGGACCACTGGGCT AAGCATGGTACAAACCGGTACATCACCATCCGGTAG

Peptide Sequence

PEP ID	Os06t0130600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:1636572:1640852:-1 gene:Os06g0130600 transcript:Os06t0130600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:GAGA binding-like family protein. (Os06t0130600-01)
Sequence	MDNLGHRENGRQRPDQYKGLHTQWMMPQTQRHLKDHQSMNLLALMNDRDNAIRERDHALA EKKAAIAERDMAFTQRDAAMAERNAAVVERDNALAALELARTNGLNMNNGNGFPQGSLSG SKNIHHHDQLSHAQSSPLQLADSPYDHAREMHISEAYPISTAPGSAGKAKRPKKNSSQAS PLKRPSGVLRKTKKPSGDWKNVGMSGCGDDSAHASVMKNEWKDQNLGLNQVAFDDSTMPA PACSCTGKLRQCYKWGNGGWQSSCCTMNISMYPLPVMPNKRHARMGGRKMSGGAFTKLLS RLAAEGHDLSTPVDLKDHWAKHGTNRYITIR

Transcript Sequence

Transcript ID	Os06t0130600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1636572:1640852:-1 gene:Os06g0130600 gene_biotype:protein_coding transcript_biotype:protein_coding description:GAGA binding-like family protein. (Os06t0130600-01)
Sequence	AGTAGCGGTGGCGGCATCATCAGCAGCAGCAGCAGCAGCGGTGGTGGTGGTCGCCGTAGC GGCTGCCAGCTTTGACCCCCACCTCACCCGCCTCCGGCGGCGCCGCCGCTCCCGTTCCTG CGCTCGCCGGCGGCGCGGCGGGTCCTCCTCCTTTCCCTCTGGCGCGCGGGGCCCCGCCCC CTCTCCCACCCCCAACATGGAAGCCTCTAGAAGGAGGGGAAGCTGCTGATACTGTGATCG AATAATTGCCCCTTTTTCTGTTACAAGCAAATGTGATAATGGACAACCTTGGCCATAGAG AAAATGGGAGGCAAAGGCCAGACCAATATAAAGGACTTCATACCCAGTGGATGATGCCCC AGACCCAAAGGCATCTGAAGGACCATCAAAGTATGAATCTCTTGGCACTGATGAATGATA GAGATAATGCCATCCGAGAAAGGGACCATGCTCTGGCTGAGAAGAAGGCAGCCATAGCTG AGCGCGATATGGCGTTTACTCAACGGGATGCTGCAATGGCTGAGCGTAATGCTGCAGTCG TGGAAAGGGACAATGCCCTTGCTGCTCTTGAGTTAGCACGTACAAACGGATTGAACATGA ATAACGGGAATGGATTCCCCCAAGGATCTCTCAGCGGATCAAAGAACATCCACCACCACG ACCAGCTTTCTCATGCTCAGTCATCACCGCTGCAACTGGCAGATTCTCCATATGATCATG CTAGAGAAATGCACATATCAGAAGCATACCCTATCTCAACAGCTCCAGGGAGTGCTGGAA AAGCAAAGAGGCCAAAGAAGAATAGTTCCCAAGCCTCTCCATTGAAGAGGCCATCAGGTG TGCTCCGGAAAACCAAGAAACCTTCTGGTGACTGGAAGAATGTCGGGATGTCTGGTTGTG GAGATGATTCTGCTCATGCTTCTGTGATGAAGAACGAGTGGAAGGACCAAAACCTTGGTC TGAATCAAGTTGCGTTTGATGATTCCACGATGCCCGCGCCTGCCTGTTCATGCACGGGGA AGCTTCGCCAATGCTACAAGTGGGGAAACGGGGGATGGCAATCATCATGTTGCACCATGA ACATTTCCATGTACCCACTCCCAGTGATGCCGAACAAGCGGCATGCTCGCATGGGGGGAC GGAAGATGAGCGGCGGTGCCTTCACAAAGCTGCTGAGCCGACTAGCGGCCGAAGGTCATG ATCTCTCGACGCCGGTCGACCTCAAGGACCACTGGGCTAAGCATGGTACAAACCGGTACA TCACCATCCGGTAGCTTGCTGATGAACGCGGATGTGATTCAAGCTGGAAAGATGGGGAAG ATCAGGCAAATCTTGCTTCTCCTGCATTCCCTAAACCCTTTGCTAGGGCCAGTCTTTGTA AGGTTGTCATTGGTTTGTAGCGGATGTAGGTAGAATTTTGTGTTTAAAGTTCTGTAGGTT CTTCTCTCCCGTTCTGAACTCTGAATTTTCTCGTGGCTCTAGAACGCTGCAGCCCACGAG AATTAAAAAATGTAACCGTAGTCTGCAGGTATTCATCGTCAGATCATTGTATAGTTTGAC AACC