Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0130400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:1629778:1633507:1 gene:Os06g0130400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUBSTANDARD STARCH GRAIN6 description:ACC synthase, Protein homologous to aminotransferase, Ethylene biosynthesis, Control of starch grain size in rice endosperm (Os06t0130400-01)
Sequence	ATGAGGCGGAGCGGCAACGGCGGCGCGGCGAAGAAGAAGAAGAAGAGGAGCGCGAGCGCG GCGTCCGAGAGGAGGCCGCGGGCGGACGGCGGGATGCGCATCGTGGTGCCGCTGCAGGGG GTGGTGCAGGGACGCGGGGGGCTCGTGCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTAC TTCTTCCAGCTCTACATCAAGCGCAACCGCGCCTCGCCGCCGCCGCCGCCCGGATCCCCC ACGGCCGCCTCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTC GCCCCGCGCGCCGCGCTCCCGGCCATCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGAC TCGCTCTACTACGCCGGCCTCCGCCGCTGCGCCGCCGACCCCTACCACCCGGTCACCAAC CCCTCCGGCATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGTTGGG AGATGGATGGAGGAGCACGCGGCGGAGGCGGCGTCCATGGCGGGCGGAGAAGACGAGGAC GAGAGGGAGCTCTCCATCAGAGGCCTCGCCGCCTACCAGCCGTACGACGGGATACTTGCC TTGAAGATGGCTCTTGCTGGATTTATGAGGCAAATCATGCAAGGATCAGTGTCCTTTGAA CCATCTCAGGTGGTTATAACATCTGGTGCAACTCCTGCAATGGAAATACTGAGTTTCTGC CTTGCTGATCCAGGAAATGCATTTCTTGTTCCATCACCATACTACCCTGGGTGGGACAGG GACATAAAATGGCGCACTGGAATTGAGTTGATACCTGTTCCTTGCCGTAGCACTGACAAC TTCAACATTAGTATCACTGCTCTAGAAATAGCCTACAATCAGGCAAAGAAGCGAGGAATA AAGGTTCGTGGGGTTCTCATATCCAACCCAAATAACCCTACAGGAAGCTTTGTGCCCAAG CAAACACTGCATGATCTTCTAGAGTTTGCTGCAGAGAAGAACATCCACTTGATATCTGAT GAAGTGTTTGCTGGCTCAACATATGGATCTGGAAAATTTGTAAGTGTGGCAGAGGTTGTT GATGATCTAGAAGACTTTGACAAAGGCAGGGTGCACATAATATATGGACTCTCGAAAGAC CTATCTCTTGCCGGGTTTCGGGTTGGGGTAATATATTCCTATAATGAAAGCATCGTGACA GCAGCTGCTAAGATTGCTAGGTTCTCGTCTGTGTCAACTCCAACACAACGCTTGCTTGTT GCCATGCTCTCGGACCAAAAGTTCATTTCAGATTACCTAAAAGTTAATAGAGAGAGATTG CGCAAGATGTACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAG AGCAGTGGAGGGTTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAG AAAGGGGAGCGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCA GGTTCATCTTGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGC GAACATGATATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCG AATCATTGA

Peptide Sequence

PEP ID	Os06t0130400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:1629778:1633507:1 gene:Os06g0130400 transcript:Os06t0130400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUBSTANDARD STARCH GRAIN6 description:ACC synthase, Protein homologous to aminotransferase, Ethylene biosynthesis, Control of starch grain size in rice endosperm (Os06t0130400-01)
Sequence	MRRSGNGGAAKKKKKRSASAASERRPRADGGMRIVVPLQGVVQGRGGLVLGSLIPCALFY FFQLYIKRNRASPPPPPGSPTAASAAAVSPIHRSLSRGLLAPRAALPAISARGASVRDDD SLYYAGLRRCAADPYHPVTNPSGIIQLGLAENYLSLDLVGRWMEEHAAEAASMAGGEDED ERELSIRGLAAYQPYDGILALKMALAGFMRQIMQGSVSFEPSQVVITSGATPAMEILSFC LADPGNAFLVPSPYYPGWDRDIKWRTGIELIPVPCRSTDNFNISITALEIAYNQAKKRGI KVRGVLISNPNNPTGSFVPKQTLHDLLEFAAEKNIHLISDEVFAGSTYGSGKFVSVAEVV DDLEDFDKGRVHIIYGLSKDLSLAGFRVGVIYSYNESIVTAAAKIARFSSVSTPTQRLLV AMLSDQKFISDYLKVNRERLRKMYHLFVDALDQVGIECYKSSGGFYCWADMSKFIRSYSE KGERKLWDRLLEEAKVNVTPGSSCHCIEPGWFRCCFTTLSEHDIPVLVQRLRTITDSHKP NH

Transcript Sequence

Transcript ID	Os06t0130400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1629778:1633507:1 gene:Os06g0130400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUBSTANDARD STARCH GRAIN6 description:ACC synthase, Protein homologous to aminotransferase, Ethylene biosynthesis, Control of starch grain size in rice endosperm (Os06t0130400-01)
Sequence	GCCAACCCAACCCAACCCAATCCCTCCACACCCCCCGCCTATGCACGCCCGCCGCGCGTG GCGCCGGGCGGCGGGGTGACGTGACGTCATCTCCTCGTCGGTCGGCGTCCCATGAGGCGG AGCGGCAACGGCGGCGCGGCGAAGAAGAAGAAGAAGAGGAGCGCGAGCGCGGCGTCCGAG AGGAGGCCGCGGGCGGACGGCGGGATGCGCATCGTGGTGCCGCTGCAGGGGGTGGTGCAG GGACGCGGGGGGCTCGTGCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTACTTCTTCCAG CTCTACATCAAGCGCAACCGCGCCTCGCCGCCGCCGCCGCCCGGATCCCCCACGGCCGCC TCCGCCGCGGCGGTGTCGCCGATCCACCGCTCGCTCTCGCGCGGCCTCCTCGCCCCGCGC GCCGCGCTCCCGGCCATCTCCGCGCGCGGCGCCTCCGTCCGCGACGACGACTCGCTCTAC TACGCCGGCCTCCGCCGCTGCGCCGCCGACCCCTACCACCCGGTCACCAACCCCTCCGGC ATCATCCAGCTCGGCCTCGCCGAGAACTACCTGTCGCTGGATTTGGTTGGGAGATGGATG GAGGAGCACGCGGCGGAGGCGGCGTCCATGGCGGGCGGAGAAGACGAGGACGAGAGGGAG CTCTCCATCAGAGGCCTCGCCGCCTACCAGCCGTACGACGGGATACTTGCCTTGAAGATG GCTCTTGCTGGATTTATGAGGCAAATCATGCAAGGATCAGTGTCCTTTGAACCATCTCAG GTGGTTATAACATCTGGTGCAACTCCTGCAATGGAAATACTGAGTTTCTGCCTTGCTGAT CCAGGAAATGCATTTCTTGTTCCATCACCATACTACCCTGGGTGGGACAGGGACATAAAA TGGCGCACTGGAATTGAGTTGATACCTGTTCCTTGCCGTAGCACTGACAACTTCAACATT AGTATCACTGCTCTAGAAATAGCCTACAATCAGGCAAAGAAGCGAGGAATAAAGGTTCGT GGGGTTCTCATATCCAACCCAAATAACCCTACAGGAAGCTTTGTGCCCAAGCAAACACTG CATGATCTTCTAGAGTTTGCTGCAGAGAAGAACATCCACTTGATATCTGATGAAGTGTTT GCTGGCTCAACATATGGATCTGGAAAATTTGTAAGTGTGGCAGAGGTTGTTGATGATCTA GAAGACTTTGACAAAGGCAGGGTGCACATAATATATGGACTCTCGAAAGACCTATCTCTT GCCGGGTTTCGGGTTGGGGTAATATATTCCTATAATGAAAGCATCGTGACAGCAGCTGCT AAGATTGCTAGGTTCTCGTCTGTGTCAACTCCAACACAACGCTTGCTTGTTGCCATGCTC TCGGACCAAAAGTTCATTTCAGATTACCTAAAAGTTAATAGAGAGAGATTGCGCAAGATG TACCATTTGTTTGTTGATGCTTTGGATCAAGTGGGGATTGAGTGCTACAAGAGCAGTGGA GGGTTCTACTGCTGGGCAGACATGAGCAAGTTCATCAGGTCTTACAGCGAGAAAGGGGAG CGCAAGCTTTGGGATAGGTTATTGGAGGAGGCAAAGGTCAATGTCACTCCAGGTTCATCT TGCCATTGCATCGAGCCTGGATGGTTCAGGTGTTGCTTCACGACATTGAGCGAACATGAT ATCCCTGTCTTAGTGCAAAGGCTCAGGACGATTACAGATAGCCATAAACCGAATCATTGA AACACCAGGATTATCCTCTCGAGCTTGTCATGGAATGGAATAACTGCTTTGCCAGGTACT CCACAGAGAATCCAGGGGGCATAGAGGAAAAAGATGGTATAATCCTTCTTTACCATGGGA ACTACTCCTAACAACCAGTAGGAGCAATCGTACGCCTTTGCTGGAACAAAGACAAATCAG GACCATGTTTGTATTGATCTGTTGAAGAACAACAGTTCTTTTGAAAGTTGTTGCTGAGTT GCTTTTATTGATCTGTAGGTCTCAGCTGCTTCCATTGTAGGGGTTTCAGATAGAAAATTG CCCATCTGTTGATAGGTTAAATCAAGCATAAGTTCATTCTCTCTGTAGGTCCATTGTGAC ATAAGCTAGTGTTGGGTTTTTGTTTTGTGAGTTTGTAAATCAGTTCCTGCTTGTGCCAGG GTTTTGGACGCGACTCATATGTTGTCATCAAAATTATTTATTT