Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0130000-03
CDS Infomation	cds chromosome:IRGSP-1.0:6:1588793:1596810:1 gene:Os06g0130000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LESION RESEMBLING DISEASE 6-6 description:AAA-type ATPase, Defense response (Os06t0130000-01);Similar to Tobacco mosaic virus helicase domain-binding protein (Fragment). (Os06t0130000-02);Similar to ATP binding. (Os06t0130000-03)
Sequence	GACGCCGCCGCGCACTACCGCAACGCGCTCCGCGTCATGCTCGAGGCCAAGGCCGCCCGC GTCCCGGACGCCGTATCCTCCAGCGAGAGGGGGCAGGTTAGGGTCTACCAGGAGAAGATC GCAAAGTGGCAGACTCAGGTGGAGGAACGACTCCGGGTGCTCGGCCAGAGGAGTGGAGCG GCTGCACCAGTGCCAAAGAAGGTTGTTACAAACAATCCTGTTAATAGGAATGACAGAGCC GCATCAACTAGCTTCCATAGGCCTACTTCGCAGCCTAGCCCTACCTTTAATAGAGGTGGT CAAGCATCTTCTCATCAGAAGAGTAGCAGTGGAGGTGCCAAACCTGTGCAAAGAGCTGGT GCAAACTATGATGATAAGCTTGTTGAAATGATAAATACGACCATTGTGGATAGAAGTCCT GCTGTTAAATGGGAAGATGTTGCTGGCCTTGACAAGGCAAAGCAAGCACTCATGGAAATG GTCATTTTACCTACCAAGCGAAGGGATTTGTTTACTGGTCTTCGGAGGCCTGCTAGAGGG CTTCTTCTCTTTGGTCCCCCGGGGAATGGAAAGACGATGCTTGCCAAAGCTGTTGCATCA GAATCTGAAGCAACATTTTTTAATGTTTCAGCTTCTTCACTGACATCAAAGTGGGTAGGA GAGGCTGAAAAGCTTGTACGGACACTCTTCATGGTCGCTGTCGATAGACAACCATCTGTA ATTTTTATGGATGAGATTGATAGTGTCATGTCAGCAAGGTTAGCTAATGAGAATGATGCT AGCAGGCGGTTGAAATCTGAATTTCTTATCCAGTTTGATGGGGTCACTTCAAACCCTGAT GATCTTGTTATTGTTATAGGTGCTACCAATAAGCCACAAGAGCTGGATGATGCTGTTCTC CGTAGACTGGTAAAGAGAATATATGTGCCATTACCTGATCCAAATGTCCGAAGATTACTG CTGAAAACTCAGCTCAAAGGACAATCATTCAAATTATCCAGTCATGATCTTGAAAGGCTT GCTGCAGATACTGAAGGATATTCCGGGAGTGATCTGAGAGCATTGTGTGAGGAAGCTGCC ATGATGCCAATCAGAGAGCTTGGTCCACAAAATATTCTCACTATAAAAGCAAATCAGTTG CGGCCCCTGAAATACGAAGATTTCAAGAAAGCCATGACTGTGATTAGGCCAAGCCTGCAG AAGAGCAAGTGGGACGAGCTAGAGAAATGGAACGAAGAATTTGGTTCAAGTTGA

Peptide Sequence

PEP ID	Os06t0130000-03
PEP Infomation	pep chromosome:IRGSP-1.0:6:1588793:1596810:1 gene:Os06g0130000 transcript:Os06t0130000-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LESION RESEMBLING DISEASE 6-6 description:AAA-type ATPase, Defense response (Os06t0130000-01);Similar to Tobacco mosaic virus helicase domain-binding protein (Fragment). (Os06t0130000-02);Similar to ATP binding. (Os06t0130000-03)
Sequence	DAAAHYRNALRVMLEAKAARVPDAVSSSERGQVRVYQEKIAKWQTQVEERLRVLGQRSGA AAPVPKKVVTNNPVNRNDRAASTSFHRPTSQPSPTFNRGGQASSHQKSSSGGAKPVQRAG ANYDDKLVEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDLFTGLRRPARG LLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAVDRQPSV IFMDEIDSVMSARLANENDASRRLKSEFLIQFDGVTSNPDDLVIVIGATNKPQELDDAVL RRLVKRIYVPLPDPNVRRLLLKTQLKGQSFKLSSHDLERLAADTEGYSGSDLRALCEEAA MMPIRELGPQNILTIKANQLRPLKYEDFKKAMTVIRPSLQKSKWDELEKWNEEFGSS

Transcript Sequence

Transcript ID	Os06t0130000-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1588793:1596810:1 gene:Os06g0130000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LESION RESEMBLING DISEASE 6-6 description:AAA-type ATPase, Defense response (Os06t0130000-01);Similar to Tobacco mosaic virus helicase domain-binding protein (Fragment). (Os06t0130000-02);Similar to ATP binding. (Os06t0130000-03)
Sequence	GACGCCGCCGCGCACTACCGCAACGCGCTCCGCGTCATGCTCGAGGCCAAGGCCGCCCGC GTCCCGGACGCCGTATCCTCCAGCGAGAGGGGGCAGGTTAGGGTCTACCAGGAGAAGATC GCAAAGTGGCAGACTCAGGTGGAGGAACGACTCCGGGTGCTCGGCCAGAGGAGTGGAGCG GCTGCACCAGTGCCAAAGAAGGTTGTTACAAACAATCCTGTTAATAGGAATGACAGAGCC GCATCAACTAGCTTCCATAGGCCTACTTCGCAGCCTAGCCCTACCTTTAATAGAGGTGGT CAAGCATCTTCTCATCAGAAGAGTAGCAGTGGAGGTGCCAAACCTGTGCAAAGAGCTGGT GCAAACTATGATGATAAGCTTGTTGAAATGATAAATACGACCATTGTGGATAGAAGTCCT GCTGTTAAATGGGAAGATGTTGCTGGCCTTGACAAGGCAAAGCAAGCACTCATGGAAATG GTCATTTTACCTACCAAGCGAAGGGATTTGTTTACTGGTCTTCGGAGGCCTGCTAGAGGG CTTCTTCTCTTTGGTCCCCCGGGGAATGGAAAGACGATGCTTGCCAAAGCTGTTGCATCA GAATCTGAAGCAACATTTTTTAATGTTTCAGCTTCTTCACTGACATCAAAGTGGGTAGGA GAGGCTGAAAAGCTTGTACGGACACTCTTCATGGTCGCTGTCGATAGACAACCATCTGTA ATTTTTATGGATGAGATTGATAGTGTCATGTCAGCAAGGTTAGCTAATGAGAATGATGCT AGCAGGCGGTTGAAATCTGAATTTCTTATCCAGTTTGATGGGGTCACTTCAAACCCTGAT GATCTTGTTATTGTTATAGGTGCTACCAATAAGCCACAAGAGCTGGATGATGCTGTTCTC CGTAGACTGGTAAAGAGAATATATGTGCCATTACCTGATCCAAATGTCCGAAGATTACTG CTGAAAACTCAGCTCAAAGGACAATCATTCAAATTATCCAGTCATGATCTTGAAAGGCTT GCTGCAGATACTGAAGGATATTCCGGGAGTGATCTGAGAGCATTGTGTGAGGAAGCTGCC ATGATGCCAATCAGAGAGCTTGGTCCACAAAATATTCTCACTATAAAAGCAAATCAGTTG CGGCCCCTGAAATACGAAGATTTCAAGAAAGCCATGACTGTGATTAGGCCAAGCCTGCAG AAGAGCAAGTGGGACGAGCTAGAGAAATGGAACGAAGAATTTGGTTCAAGTTGACACTAG ACAATGGCCTATCTGAAAGCCTGAAAAGATCAAATTCTTGAGATGCCATCACAACTGAAA CTGAACACACGAGCGAACCATCAGTTGATGCCCAGAATCCAGATAAGCCATCTCATGATT GGAGAAGAATGATTGGTGGTGGCCAATTGGTGAGGCGACGAGGAGCTAATCATGTCCCGG ACGAAGCCAGCGTCGCGATCGCCATGGCAGCAGCAGCAGGTGGACGTTTACTCATCCGCA TGGCCCATTTAGCGCCCCCATTTGCGATTTTTCGCAGCATCACGGAGA