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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0129000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:1530110:1531684:1 gene:Os06g0129000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0129000-01)
Sequence

ATGGCCGTGCTCCTCCTCCTCCCCGTCCCCGTCCCGCCGTCTCTCCTCTACGCCGTCGCC
GCACTCGCGCTCGCCGCCGTCACCCACCTCCTCCACCTCCCCTCCCTCCTCCTCTACGCC
CTCCACACCTACATCCACCCGGACGCTGTCCCCTCCTCCACCCCTCGCGCCGTCCTCCGC
CCGCCCGGCGCCGCCGCTGGATCCGGGAACCCCAAGCAGCAACGCGGTGGTGGTGGTGGT
GGTGGCAAGGCGGCGGCGTCTCCGTTCGACGAGGGGTCCAACTCCGCGCAGCTCTACCGC
CTCCGCCTCTCCCACGCCACGCTCGCCACGCGCCCGCGCTTCGCCGACTTCCACCTCGCA
CTCCTCCTCCCGCTCGCGCTGCTGCCACCGGCGCTGCTGCTCCCGGCCTCCGCCGCCGGC
GCGGCCGCCCCGCTCGCGCCGCTCCCGCCCGTCGTGTTCCTCTTCGTCGCGCTGCTGCGC
CTCGTGATGCTCCCGTCCCCGCGCCCCGCCTACCTCGCCGCCGCGCTCGGCGCGCTGCTC
GTCGCTACGCTGCTCTCGTCCAGCCCGTTCGCCGGCGCGCTCGCGTCGCTCGCCGCGCTC
CCCGCCACGCGGTTCGCGCGCTCGTTCTGGCTCGGCACCGACCAGCCCCGCTCTGGGCTC
GCCGTGCTCGCGTCGTCCGCGCCCGCGCGCCTGCTCCTCTACCTCGCCGTCCTCGTCTCC
TCCGCGGCGTCGATCCTCCAATGCTGCGGGTTCCTGGACAGCCCGGAGCTTGAGGTGAAG
CTGCTCGCCGCCGCGGCGGGGCTGCAGCTGCTGGCCTCGCGGGCGGCCGTGCAGATGTAT
CTCAACGAGGCCGTCTTCTGCTGGTACCAGCGGCTGCACGTCAGCCGCTCGCCGGACACG
GAGTACGGCCGCGCCAAGGTGTTCCTGCACAACCACCATCTCTGCGCCGTGGCCACGCAG
CTCGTCGCGCCGCCACTGCTCGTGCTCTCGCTGCTGGCATTGTGGCGAGTGCAAGGAAAA
GATTACTTTGAGGGCGTGGAGGAGCTGAACTGGCTTGTTGGGTGGTCGGTTGCCATGAAG
GAGGCTGCATTGCTCGCGGCGCGGTGGATCGTTGCGGTTTGGTCGACGGTGACCGTGGGC
ACGCTCGTGTTTTACAAGCGTGGATGGTTATTCGTCTTGTGA

Peptide Sequence

PEP ID

Os06t0129000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:1530110:1531684:1 gene:Os06g0129000 transcript:Os06t0129000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0129000-01)
Sequence

MAVLLLLPVPVPPSLLYAVAALALAAVTHLLHLPSLLLYALHTYIHPDAVPSSTPRAVLR
PPGAAAGSGNPKQQRGGGGGGGKAAASPFDEGSNSAQLYRLRLSHATLATRPRFADFHLA
LLLPLALLPPALLLPASAAGAAAPLAPLPPVVFLFVALLRLVMLPSPRPAYLAAALGALL
VATLLSSSPFAGALASLAALPATRFARSFWLGTDQPRSGLAVLASSAPARLLLYLAVLVS
SAASILQCCGFLDSPELEVKLLAAAAGLQLLASRAAVQMYLNEAVFCWYQRLHVSRSPDT
EYGRAKVFLHNHHLCAVATQLVAPPLLVLSLLALWRVQGKDYFEGVEELNWLVGWSVAMK
EAALLAARWIVAVWSTVTVGTLVFYKRGWLFVL

Transcript Sequence

Transcript ID

Os06t0129000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:1530110:1531684:1 gene:Os06g0129000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0129000-01)
Sequence

ATCTCCCAACCACCTCCACTCGCCTCCTTCAGATCCACTCCACCCTCAACTCCGGCGATC
TACCCACTCGCCGCCGGCGATGGCCGTGCTCCTCCTCCTCCCCGTCCCCGTCCCGCCGTC
TCTCCTCTACGCCGTCGCCGCACTCGCGCTCGCCGCCGTCACCCACCTCCTCCACCTCCC
CTCCCTCCTCCTCTACGCCCTCCACACCTACATCCACCCGGACGCTGTCCCCTCCTCCAC
CCCTCGCGCCGTCCTCCGCCCGCCCGGCGCCGCCGCTGGATCCGGGAACCCCAAGCAGCA
ACGCGGTGGTGGTGGTGGTGGTGGCAAGGCGGCGGCGTCTCCGTTCGACGAGGGGTCCAA
CTCCGCGCAGCTCTACCGCCTCCGCCTCTCCCACGCCACGCTCGCCACGCGCCCGCGCTT
CGCCGACTTCCACCTCGCACTCCTCCTCCCGCTCGCGCTGCTGCCACCGGCGCTGCTGCT
CCCGGCCTCCGCCGCCGGCGCGGCCGCCCCGCTCGCGCCGCTCCCGCCCGTCGTGTTCCT
CTTCGTCGCGCTGCTGCGCCTCGTGATGCTCCCGTCCCCGCGCCCCGCCTACCTCGCCGC
CGCGCTCGGCGCGCTGCTCGTCGCTACGCTGCTCTCGTCCAGCCCGTTCGCCGGCGCGCT
CGCGTCGCTCGCCGCGCTCCCCGCCACGCGGTTCGCGCGCTCGTTCTGGCTCGGCACCGA
CCAGCCCCGCTCTGGGCTCGCCGTGCTCGCGTCGTCCGCGCCCGCGCGCCTGCTCCTCTA
CCTCGCCGTCCTCGTCTCCTCCGCGGCGTCGATCCTCCAATGCTGCGGGTTCCTGGACAG
CCCGGAGCTTGAGGTGAAGCTGCTCGCCGCCGCGGCGGGGCTGCAGCTGCTGGCCTCGCG
GGCGGCCGTGCAGATGTATCTCAACGAGGCCGTCTTCTGCTGGTACCAGCGGCTGCACGT
CAGCCGCTCGCCGGACACGGAGTACGGCCGCGCCAAGGTGTTCCTGCACAACCACCATCT
CTGCGCCGTGGCCACGCAGCTCGTCGCGCCGCCACTGCTCGTGCTCTCGCTGCTGGCATT
GTGGCGAGTGCAAGGAAAAGATTACTTTGAGGGCGTGGAGGAGCTGAACTGGCTTGTTGG
GTGGTCGGTTGCCATGAAGGAGGCTGCATTGCTCGCGGCGCGGTGGATCGTTGCGGTTTG
GTCGACGGTGACCGTGGGCACGCTCGTGTTTTACAAGCGTGGATGGTTATTCGTCTTGTG
ATCAATCCCTTTTTTAGCTTGATTCTGCGTGATTGATTCAGATGGAGGTTGTATTTGATA
GAGAGGTTCTACACTGGATTGCCGGAGTTTTGATAGCACGGCACAAGATTTTGGCTTGCA
TTTCTTTTGTTGGAGGACGTTGCTGGATCAAAACTTTGATTTTTCTTTTTTCCTTGTCTG
TTCTTTACCAGAGGAGCAACTTCAGGTTGTTCTTTTCTCTACACGTTGAGCAGAAAACTG
ACTGGTCAGTCACCCTGTTGTACTATCACTGTATCCACTTTAGTGCATATCAATGAATCA
ATTATTTTTCACCTG