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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0128500-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:1512826:1516267:1 gene:Os06g0128500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L47, mitochondrial family protein. (Os06t0128500-01)
Sequence

ATGCTGTCCTTGTCGAGGGCGCTGGGGAGGCGGCTCTTCTCCTCCTCCTCCGCCGCCGCA
TCTGATGCCACCGCCGCGGCCGCCGCGGTGGTGAGGAAGGCGCAGAACCCACTGGAGGAG
TTCTTCGAGGTCGAGAGGAGCACCGAGGAAGACAAGCCCCCTCCGCACTACGGCCGTAGT
TGGAAGGCTTCCGAGTTACGCCTAAAATCCTGGGATGACCTTCAGAAGCTATGGTATGTC
CTTCTGAAGGAAAAGAACATGCTTATGAGTCAGCGCCAGATGCTACATTCAGAGAATATG
CGTTTTCCAAACCCTGAACGTGTTTCCAAGGTGAAGAAGTCAATGTGTCGAATAAAGCAT
GTCTTGACTGAAAGGGCCATAGCAGAACCTGACCCAAGGAGATCCGCAGAAATGAAGCGG
ATGATCAACGCCCTTTGA

Peptide Sequence

PEP ID

Os06t0128500-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:1512826:1516267:1 gene:Os06g0128500 transcript:Os06t0128500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L47, mitochondrial family protein. (Os06t0128500-01)
Sequence

MLSLSRALGRRLFSSSSAAASDATAAAAAVVRKAQNPLEEFFEVERSTEEDKPPPHYGRS
WKASELRLKSWDDLQKLWYVLLKEKNMLMSQRQMLHSENMRFPNPERVSKVKKSMCRIKH
VLTERAIAEPDPRRSAEMKRMINAL

Transcript Sequence

Transcript ID

Os06t0128500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:1512826:1516267:1 gene:Os06g0128500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L47, mitochondrial family protein. (Os06t0128500-01)
Sequence

CTTTCGCATCTAAACCCTCCCCTCCCGTGGATCATCGCCGCCGCCGCCGGTATCTCGCTG
ACCTTTCCTCTCGTCGGACCAAGTTTTCGCGCGTCCCAATCTGCGGATCCGTCGGTCGTC
GCCGTCGTGATGCTGTCCTTGTCGAGGGCGCTGGGGAGGCGGCTCTTCTCCTCCTCCTCC
GCCGCCGCATCTGATGCCACCGCCGCGGCCGCCGCGGTGGTGAGGAAGGCGCAGAACCCA
CTGGAGGAGTTCTTCGAGGTCGAGAGGAGCACCGAGGAAGACAAGCCCCCTCCGCACTAC
GGCCGTAGTTGGAAGGCTTCCGAGTTACGCCTAAAATCCTGGGATGACCTTCAGAAGCTA
TGGTATGTCCTTCTGAAGGAAAAGAACATGCTTATGAGTCAGCGCCAGATGCTACATTCA
GAGAATATGCGTTTTCCAAACCCTGAACGTGTTTCCAAGGTGAAGAAGTCAATGTGTCGA
ATAAAGCATGTCTTGACTGAAAGGGCCATAGCAGAACCTGACCCAAGGAGATCCGCAGAA
ATGAAGCGGATGATCAACGCCCTTTGATCAGCTTTCATGTTTCATGTTGGATTAACGGTT
GAAAGGACGAGTAGCTATTTTTAGAAATATCTGCTTCTTTTCTGTTGTATGCTATTCTTT
ATCTCGGAAAGCGGTACAAGACTGGATCCTTTTGATACCCATGGAATGCTTGAAAGATCC
TACTATACTATTGACATT