Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0127100-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:1434770:1435533:1 gene:Os06g0127100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1C description:Dehydration-responsive element-binding protein 1C. (Os06t0127100-01)
Sequence

ATGGAGTACTACGAGCAGGAGGAGTACGCGACGGTGACGTCGGCGCCGCCGAAGCGGCCG
GCGGGGAGGACCAAGTTCAGGGAGACGAGGCACCCGGTGTACCGCGGCGTGCGGCGGCGG
GGGCCCGCGGGGCGGTGGGTGTGCGAGGTCAGGGAGCCCAACAAGAAGTCCCGCATCTGG
CTCGGCACCTTCGCCACCGCCGAGGCCGCCGCGCGCGCCCACGACGTCGCCGCGCTCGCC
CTCCGCGGCCGCGGCGCGTGCCTCAACTTCGCCGACTCGGCCCGCCTCCTCCGCGTCGAC
CCGGCCACCCTCGCCACCCCCGACGACATCCGCCGCGCCGCCATCGAGCTCGCCGAGTCA
TGCCCGCACGACGCCGCCGCCGCCGCCGCCTCCAGCTCCGCCGCCGCCGTCGAGGCCTCC
GCCGCCGCCGCGCCCGCCATGATGATGCAGTACCAGGACGACATGGCGGCGACGCCGTCC
AGCTACGACTACGCGTACTACGGCAACATGGACTTCGACCAGCCGTCCTACTACTACGAC
GGGATGGGCGGCGGCGGCGAGTACCAGAGCTGGCAGATGGACGGCGACGACGATGGTGGC
GCCGGCGGCTACGGCGGCGGCGACGTCACACTCTGGAGCTACTGA

Peptide Sequence

PEP ID

Os06t0127100-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:1434770:1435533:1 gene:Os06g0127100 transcript:Os06t0127100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1C description:Dehydration-responsive element-binding protein 1C. (Os06t0127100-01)
Sequence

MEYYEQEEYATVTSAPPKRPAGRTKFRETRHPVYRGVRRRGPAGRWVCEVREPNKKSRIW
LGTFATAEAAARAHDVAALALRGRGACLNFADSARLLRVDPATLATPDDIRRAAIELAES
CPHDAAAAAASSSAAAVEASAAAAPAMMMQYQDDMAATPSSYDYAYYGNMDFDQPSYYYD
GMGGGGEYQSWQMDGDDDGGAGGYGGGDVTLWSY

Transcript Sequence

Transcript ID

Os06t0127100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:1434770:1435533:1 gene:Os06g0127100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1C description:Dehydration-responsive element-binding protein 1C. (Os06t0127100-01)
Sequence

CCAGCAGCAGCAACACACACTACTGACATGGAGTACTACGAGCAGGAGGAGTACGCGACG
GTGACGTCGGCGCCGCCGAAGCGGCCGGCGGGGAGGACCAAGTTCAGGGAGACGAGGCAC
CCGGTGTACCGCGGCGTGCGGCGGCGGGGGCCCGCGGGGCGGTGGGTGTGCGAGGTCAGG
GAGCCCAACAAGAAGTCCCGCATCTGGCTCGGCACCTTCGCCACCGCCGAGGCCGCCGCG
CGCGCCCACGACGTCGCCGCGCTCGCCCTCCGCGGCCGCGGCGCGTGCCTCAACTTCGCC
GACTCGGCCCGCCTCCTCCGCGTCGACCCGGCCACCCTCGCCACCCCCGACGACATCCGC
CGCGCCGCCATCGAGCTCGCCGAGTCATGCCCGCACGACGCCGCCGCCGCCGCCGCCTCC
AGCTCCGCCGCCGCCGTCGAGGCCTCCGCCGCCGCCGCGCCCGCCATGATGATGCAGTAC
CAGGACGACATGGCGGCGACGCCGTCCAGCTACGACTACGCGTACTACGGCAACATGGAC
TTCGACCAGCCGTCCTACTACTACGACGGGATGGGCGGCGGCGGCGAGTACCAGAGCTGG
CAGATGGACGGCGACGACGATGGTGGCGCCGGCGGCTACGGCGGCGGCGACGTCACACTC
TGGAGCTACTGATGATCGCGAGTTGGAGCTAGCAGTTTTGAGCTCAACCAGCTTTGCTCC
TCCTATACAGCTAAATACTGTAGGAGAAATTAATGGAGATTTTT