Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0126000-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:1389403:1395801:-1 gene:Os06g0126000 gene_biotype:protein_coding transcript_biotype:protein_coding description:LIM binding protein domain containing protein. (Os06t0126000-01);Hypothetical conserved gene. (Os06t0126000-02);Hypothetical conserved gene. (Os06t0126000-04);Hypothetical conserved gene. (Os06t0126000-05)
Sequence

GCCGACGAACTCAAGGTTCTTCAAAGTGATGATTGGGATCGAACCCTGGTAACCTCCATG
TCTGGGGCGCCATGCTCCAACCTTGGACTTGTTCCCAGGGATATGCATGGTAGTATCCCT
ATTAGCACTACAAATTCCTCTGGGCCAAGCATTGGTGTTAGCTCTTTGGTGACGGATGCT
AACTCATCGCTCTCCGGAGGTGCCCAGTTGCAGCCAAGTACGAGCATGAATGCTGATTCA
TTCATGCGCCTTCCTGCTTCCCCAATGTCGTTTTCATCCAATAACATCTCTGGATCTTCA
GTTATTGATGGTCCCATTGTGCAACAAAGTCCTCCCCAAGAGCAGATGCAGAAGCGAAGG
TCTTCTAGTGTAACATCACAACCTGTTATTGATGCTGCTGGTGCATTGCATGCTCAGAAG
AAGTCAAGGGTTGATATTAGGCAAGATGATATCCTGCAACACAATTTAATCCAGCAACTG
CTCCAAGGCCAGAGTTCTCTTCATCTGCAGGGTCAACAGAACCCTCAGATTCAAGCCTTG
ATCCATCAGCATAAACTGGCACAGATTCAGCAGCAACAGCAGCATCAGATGTTGCAACCA
TTTTCACAGATCCAACAATCTCAAGTTGGCATACCTCGGCAGCCACAGTTGAGGCCTCCA
CTAGCGCAGCCTGGAATGCAGCTAGCTGGACCTGTTAGGACTCCTGTCGAGAATGGGCTT
TGTTCTCGAAGGTTAAAGCAATACTTATACCATAAGCGTCACCGACCAGAGAATAATCCA
ATAACATACTGGAGGAAGCTTATTGATGAATATTTTGCACCACGAGCAAGAGAAAGATGG
TGTGTATCCTCGTATGAGAAAAGAGGAAATCCTTCAGGTGCTGTTCCACACACAGCTCCG
GATTCATGGCGCTGTGACATTTGTAATACACATGGGGGCAAAGGATATGAGGCTACCTAT
GAAATACTTCCTAGACTCTGTCAAATTAGATTTGACCATGGTGTTATAGATGAATACTTA
TTCCTTGACATGGCCAATGAATTCCGGTTGCCCAATGGACTAATGCTGCTGGAACATACT
AAAGTTGTTCAGAAAAGCATTTATGAACATATGCATGTGATACACGAGGGGCAGTTGAGA
ATCATATTCACACCAGAACTGAAGATAATGTCCTGGGAGTTCTGTTCACGGCGACATGAT
GAGTATATCACTCGCAGGTTTCTTTCACCCCAGGTTGCTCATCTGCTGCAAGTTGCCCAG
AAATATCAAACTGTTGCCACTGAAAGTGGTCCAGCTGGGGTCTCAAACAGTGATGCACAG
AACATTTGCAACATGTTTGTGACGGCGTCACGACAGCTAGCGAAAAATATAGACCACCAC
ACCTTAAATGAGCATGGTCTATCTAAAAGATATGTTCGCTGCTTGCAGATATCAGAGGTG
GTGAATCACATGAAAGACCTGATTGAATTCAGCCACAAGAACAAGCTTGGTCCTATAGAG
GGTCTGAAGAGCTATCCCAAGCAAACTGCAGCAAAACTTCCAGTACAAAACATGCACGAG
CCAAAGCAACTAATGGCAGCTGCTGGCCTTCCTAATGACCAGACTAACCTCAAAGCCATG
GGTGTCAAAACAGAAATGAACACCCATGCGAATGAGACGCACGGTATTGGACCAATTGGA
AATGGTCCGCAGAATGCTGCTGCACTTAACAATTACCAGAATCCCATTGGAAATGGTCTG
CAGAATGCTGCTGCACTTAACAATTACCAGAATATCCTTAGAAGTTCAGTCGCAAACCAG
AGTTTGCTTCAGCAGGAGGCATCAAGCATGTTTAAAGGTCCCACAGCAATGCACAATGGC
ATTCAGCTGGAAGCATCTAGATCCTTCCGTGGACCAAACCAGGTGCATCTCGCGCAGTTC
CAACATCCGGCCTCATTTCAGCAGCCTATGCCTCAGCAGAGCAGCCTCCAGGGCTTGGGT
GTGAGCCCACAATATCAGCAGCATGTGCTCCATCAGTTGCTGCAAGAGGCCAAGAACACT
AACAACCGTGTCTTGGCGCAGCAGCAGCAGCAACAACAACTTCAACATGCTCCTGCTAAC
AGTGGTCTTGCATCAGGAGGAACGGCTATCACCGGCAGCGCCGCTAGCGGGGATCATATG
AATAACAACGGCGCGGTGAAGGGTGGGACTCCAATGGTTACAACAGGTCCTAGCAGTGTG
ATCAACAATACAGCCAGCATCCTCCCCAGCAGAAGTAACAGCTTCAAGTCAGTGAGCAGC
AACCCCCAAGTTGCAGCTGCTGCGGGCGGCGGCATTGGCAGCGGCGGCCATGCGGCTACC
CCCAAGGCTGATGCTCTGCATGAGTTGGATGATCTTGACAATCTTGGGAATCTGATCAGT
ACTGAACTGGAGGAGAGTGGGCTGTTCCTGGGTGACCAGGCAGGTGGTGGCTACTCATGG
AACATGTGA

Peptide Sequence

PEP ID

Os06t0126000-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:1389403:1395801:-1 gene:Os06g0126000 transcript:Os06t0126000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:LIM binding protein domain containing protein. (Os06t0126000-01);Hypothetical conserved gene. (Os06t0126000-02);Hypothetical conserved gene. (Os06t0126000-04);Hypothetical conserved gene. (Os06t0126000-05)
Sequence

ADELKVLQSDDWDRTLVTSMSGAPCSNLGLVPRDMHGSIPISTTNSSGPSIGVSSLVTDA
NSSLSGGAQLQPSTSMNADSFMRLPASPMSFSSNNISGSSVIDGPIVQQSPPQEQMQKRR
SSSVTSQPVIDAAGALHAQKKSRVDIRQDDILQHNLIQQLLQGQSSLHLQGQQNPQIQAL
IHQHKLAQIQQQQQHQMLQPFSQIQQSQVGIPRQPQLRPPLAQPGMQLAGPVRTPVENGL
CSRRLKQYLYHKRHRPENNPITYWRKLIDEYFAPRARERWCVSSYEKRGNPSGAVPHTAP
DSWRCDICNTHGGKGYEATYEILPRLCQIRFDHGVIDEYLFLDMANEFRLPNGLMLLEHT
KVVQKSIYEHMHVIHEGQLRIIFTPELKIMSWEFCSRRHDEYITRRFLSPQVAHLLQVAQ
KYQTVATESGPAGVSNSDAQNICNMFVTASRQLAKNIDHHTLNEHGLSKRYVRCLQISEV
VNHMKDLIEFSHKNKLGPIEGLKSYPKQTAAKLPVQNMHEPKQLMAAAGLPNDQTNLKAM
GVKTEMNTHANETHGIGPIGNGPQNAAALNNYQNPIGNGLQNAAALNNYQNILRSSVANQ
SLLQQEASSMFKGPTAMHNGIQLEASRSFRGPNQVHLAQFQHPASFQQPMPQQSSLQGLG
VSPQYQQHVLHQLLQEAKNTNNRVLAQQQQQQQLQHAPANSGLASGGTAITGSAASGDHM
NNNGAVKGGTPMVTTGPSSVINNTASILPSRSNSFKSVSSNPQVAAAAGGGIGSGGHAAT
PKADALHELDDLDNLGNLISTELEESGLFLGDQAGGGYSWNM

Transcript Sequence

Transcript ID

Os06t0126000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:1389403:1395801:-1 gene:Os06g0126000 gene_biotype:protein_coding transcript_biotype:protein_coding description:LIM binding protein domain containing protein. (Os06t0126000-01);Hypothetical conserved gene. (Os06t0126000-02);Hypothetical conserved gene. (Os06t0126000-04);Hypothetical conserved gene. (Os06t0126000-05)
Sequence

GCCTACAGGCGCAGGAAGAGGAGGAGAAGAAGCGGAAGAGGAGAGAAAAAAAAAATTCGC
AGCAAAAAAGAAAAAAAAATCGCAGCTGCAAGGTAGAGGAGGAGAAGTTGGGGTTTGGGA
GGGCCAGCGATTGAGCCGACGAACTCAAGGTTCTTCAAAGTGATGATTGGGATCGAACCC
TGGTAACCTCCATGTCTGGGGCGCCATGCTCCAACCTTGGACTTGTTCCCAGGGATATGC
ATGGTAGTATCCCTATTAGCACTACAAATTCCTCTGGGCCAAGCATTGGTGTTAGCTCTT
TGGTGACGGATGCTAACTCATCGCTCTCCGGAGGTGCCCAGTTGCAGCCAAGTACGAGCA
TGAATGCTGATTCATTCATGCGCCTTCCTGCTTCCCCAATGTCGTTTTCATCCAATAACA
TCTCTGGATCTTCAGTTATTGATGGTCCCATTGTGCAACAAAGTCCTCCCCAAGAGCAGA
TGCAGAAGCGAAGGTCTTCTAGTGTAACATCACAACCTGTTATTGATGCTGCTGGTGCAT
TGCATGCTCAGAAGAAGTCAAGGGTTGATATTAGGCAAGATGATATCCTGCAACACAATT
TAATCCAGCAACTGCTCCAAGGCCAGAGTTCTCTTCATCTGCAGGGTCAACAGAACCCTC
AGATTCAAGCCTTGATCCATCAGCATAAACTGGCACAGATTCAGCAGCAACAGCAGCATC
AGATGTTGCAACCATTTTCACAGATCCAACAATCTCAAGTTGGCATACCTCGGCAGCCAC
AGTTGAGGCCTCCACTAGCGCAGCCTGGAATGCAGCTAGCTGGACCTGTTAGGACTCCTG
TCGAGAATGGGCTTTGTTCTCGAAGGTTAAAGCAATACTTATACCATAAGCGTCACCGAC
CAGAGAATAATCCAATAACATACTGGAGGAAGCTTATTGATGAATATTTTGCACCACGAG
CAAGAGAAAGATGGTGTGTATCCTCGTATGAGAAAAGAGGAAATCCTTCAGGTGCTGTTC
CACACACAGCTCCGGATTCATGGCGCTGTGACATTTGTAATACACATGGGGGCAAAGGAT
ATGAGGCTACCTATGAAATACTTCCTAGACTCTGTCAAATTAGATTTGACCATGGTGTTA
TAGATGAATACTTATTCCTTGACATGGCCAATGAATTCCGGTTGCCCAATGGACTAATGC
TGCTGGAACATACTAAAGTTGTTCAGAAAAGCATTTATGAACATATGCATGTGATACACG
AGGGGCAGTTGAGAATCATATTCACACCAGAACTGAAGATAATGTCCTGGGAGTTCTGTT
CACGGCGACATGATGAGTATATCACTCGCAGGTTTCTTTCACCCCAGGTTGCTCATCTGC
TGCAAGTTGCCCAGAAATATCAAACTGTTGCCACTGAAAGTGGTCCAGCTGGGGTCTCAA
ACAGTGATGCACAGAACATTTGCAACATGTTTGTGACGGCGTCACGACAGCTAGCGAAAA
ATATAGACCACCACACCTTAAATGAGCATGGTCTATCTAAAAGATATGTTCGCTGCTTGC
AGATATCAGAGGTGGTGAATCACATGAAAGACCTGATTGAATTCAGCCACAAGAACAAGC
TTGGTCCTATAGAGGGTCTGAAGAGCTATCCCAAGCAAACTGCAGCAAAACTTCCAGTAC
AAAACATGCACGAGCCAAAGCAACTAATGGCAGCTGCTGGCCTTCCTAATGACCAGACTA
ACCTCAAAGCCATGGGTGTCAAAACAGAAATGAACACCCATGCGAATGAGACGCACGGTA
TTGGACCAATTGGAAATGGTCCGCAGAATGCTGCTGCACTTAACAATTACCAGAATCCCA
TTGGAAATGGTCTGCAGAATGCTGCTGCACTTAACAATTACCAGAATATCCTTAGAAGTT
CAGTCGCAAACCAGAGTTTGCTTCAGCAGGAGGCATCAAGCATGTTTAAAGGTCCCACAG
CAATGCACAATGGCATTCAGCTGGAAGCATCTAGATCCTTCCGTGGACCAAACCAGGTGC
ATCTCGCGCAGTTCCAACATCCGGCCTCATTTCAGCAGCCTATGCCTCAGCAGAGCAGCC
TCCAGGGCTTGGGTGTGAGCCCACAATATCAGCAGCATGTGCTCCATCAGTTGCTGCAAG
AGGCCAAGAACACTAACAACCGTGTCTTGGCGCAGCAGCAGCAGCAACAACAACTTCAAC
ATGCTCCTGCTAACAGTGGTCTTGCATCAGGAGGAACGGCTATCACCGGCAGCGCCGCTA
GCGGGGATCATATGAATAACAACGGCGCGGTGAAGGGTGGGACTCCAATGGTTACAACAG
GTCCTAGCAGTGTGATCAACAATACAGCCAGCATCCTCCCCAGCAGAAGTAACAGCTTCA
AGTCAGTGAGCAGCAACCCCCAAGTTGCAGCTGCTGCGGGCGGCGGCATTGGCAGCGGCG
GCCATGCGGCTACCCCCAAGGCTGATGCTCTGCATGAGTTGGATGATCTTGACAATCTTG
GGAATCTGATCAGTACTGAACTGGAGGAGAGTGGGCTGTTCCTGGGTGACCAGGCAGGTG
GTGGCTACTCATGGAACATGTGACAAATGCTTGCCTGCTTGGCTTCTTGGTGATGATGGA
AACTGCCGTAGATTCTAGCTTCTCGTCTTGTTCTTTTTTGTTTTGGGTATGTGGAGTTTT
TGTTTGGGGTGTCTGAAACAGTTTCTGATGATGATGATACACTGATGTAATTTAAGCGTT
ATGTGCGCTGGTAAGTGAGTTGGCTTGGAATGCTGAGATCG