Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0125800-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:1383618:1385968:1 gene:Os06g0125800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BLAST AND BTH INDUCED 1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0125800-01)
Sequence

ATGGCCACCGTGGGGCAGCCTGATGCCATGAGAAGGATCACCGTTCACTACGTGAATCCG
CCGCCGATCGCCGGCGCCGGAGAAGCACACGTCGATGGCCTCGACGACGAGGTTCTTGAT
TATGTGATTGGTGATGTTCTTCAGGATCAGGAGGGTCTGTATCAATCGATATTGTATGGC
AAATACGGGGATGACATGAGAGGGGCAAGAAACACTGCTCTTGCCCAATCTGATGGTTTA
CATTACTACTATCACGGAGAGAACAGCAGTGGTGAAGCAACAACCTCGAGAAATTCAGAA
ATCGACCAACAGATTGAGTATGACTTGGTGTTCGCTAGGCAGCTGCAGGCAATGGATAAT
CTGACAATTGAGACACCTGCAGATGAAGATGATGATATAAGCTGCGTACCCTCTCCATCT
GACTCTGAAACCGATGAACCGGCAGAAGGCAACAACGAAGAGGCTGCCACACAGGATGAT
AACGATGATCCAGACAACATGACATACGAGCAAAGGCAGGCACTTGTGGAATCTGTAGGA
AATGAGAACAGAGGTTTATCTGATCTGCTTATCTCCTACTTGGAGACATGGAAGTACAAA
TCAGGCTTTTTCCCAAGGAAGGCAAACCATGATAACTGTCCTATATGTCTATCCGCTTTC
AGACGCCGAGAAACACTCATTACATTGGCTTGCAAGCATAGTTACCATGAAGGTTGTATT
GCTAGATGGCTCAAGATTGACAAGGCCTGCCCAGTTTGCAAATATGAAGTGTTTGGACCT
TCCTAG

Peptide Sequence

PEP ID

Os06t0125800-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:1383618:1385968:1 gene:Os06g0125800 transcript:Os06t0125800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BLAST AND BTH INDUCED 1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0125800-01)
Sequence

MATVGQPDAMRRITVHYVNPPPIAGAGEAHVDGLDDEVLDYVIGDVLQDQEGLYQSILYG
KYGDDMRGARNTALAQSDGLHYYYHGENSSGEATTSRNSEIDQQIEYDLVFARQLQAMDN
LTIETPADEDDDISCVPSPSDSETDEPAEGNNEEAATQDDNDDPDNMTYEQRQALVESVG
NENRGLSDLLISYLETWKYKSGFFPRKANHDNCPICLSAFRRRETLITLACKHSYHEGCI
ARWLKIDKACPVCKYEVFGPS

Transcript Sequence

Transcript ID

Os06t0125800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:1383618:1385968:1 gene:Os06g0125800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BLAST AND BTH INDUCED 1 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os06t0125800-01)
Sequence

ATTAACAAAGAATCCGTCCAGCCTTGAGAAGCAGAGAAGAGGAGAGAAACAAGAGACAGA
CAGACAGAGATAGAGTAACTGAGTAAACGGGTTCTTGCCTGACATTTGTCTTGTCCGGGT
GGCCATTCATGGCCACCGTGGGGCAGCCTGATGCCATGAGAAGGATCACCGTTCACTACG
TGAATCCGCCGCCGATCGCCGGCGCCGGAGAAGCACACGTCGATGGCCTCGACGACGAGG
TTCTTGATTATGTGATTGGTGATGTTCTTCAGGATCAGGAGGGTCTGTATCAATCGATAT
TGTATGGCAAATACGGGGATGACATGAGAGGGGCAAGAAACACTGCTCTTGCCCAATCTG
ATGGTTTACATTACTACTATCACGGAGAGAACAGCAGTGGTGAAGCAACAACCTCGAGAA
ATTCAGAAATCGACCAACAGATTGAGTATGACTTGGTGTTCGCTAGGCAGCTGCAGGCAA
TGGATAATCTGACAATTGAGACACCTGCAGATGAAGATGATGATATAAGCTGCGTACCCT
CTCCATCTGACTCTGAAACCGATGAACCGGCAGAAGGCAACAACGAAGAGGCTGCCACAC
AGGATGATAACGATGATCCAGACAACATGACATACGAGCAAAGGCAGGCACTTGTGGAAT
CTGTAGGAAATGAGAACAGAGGTTTATCTGATCTGCTTATCTCCTACTTGGAGACATGGA
AGTACAAATCAGGCTTTTTCCCAAGGAAGGCAAACCATGATAACTGTCCTATATGTCTAT
CCGCTTTCAGACGCCGAGAAACACTCATTACATTGGCTTGCAAGCATAGTTACCATGAAG
GTTGTATTGCTAGATGGCTCAAGATTGACAAGGCCTGCCCAGTTTGCAAATATGAAGTGT
TTGGACCTTCCTAGCGTGTGAGGAGGCGATCAACAAGGCTGACCAACTATGACTCGATGA
GACGGCATATAGTGGTTGCAGCATCTGCTCTGCAGTATTAATTAAAAAGGGAAACCTTAA
CTCCCAAAAAAAACAGAGAAGGGAAGAAAAAGAAAGC