Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0125600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:1377416:1379454:1 gene:Os06g0125600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0125600-01)
Sequence

ATGGAGGAGGCGAAGCAGCTGCACGCGCGCGCGCTCCGCCGCGGGGTGCGCCTGCTGCAG
CCGCTGCTCCTCCGCGTCCTCGCCGCCGGCGACCACCGCTACGCCGCGCGCCTCCTCGAA
TCCTACCCGGCGCCTCCTTCGGCGCCGCTCCACAACCGCCTCCTCCATGCTCTCGCCTCC
CTCCACCGCCCCCACCCCCTCCTCCTCCCCTTCTTCTCCCGCCTCCATCGCCTTCGCCTC
CTCACTCCGCTGTCATTCACTCTCCTCTTCTCCTCCTCCTCCTCGTCCGCCTCCTCCTCC
ACCCCCTTCTTCCTCTGCTCCCACTCCCTGCTTATCAAATTAGGCCACTTCGCATCAAGC
GATCCCTTCCTCTCCTCCGCGCTTGTCTCATTCTACGCCAAGAGCAAGCTCCTGGTTGAA
GCCAGGAAGGTGTTCGACGAATTGACGTGCAGGGACACGGCCGTGTACAATGCGCTTCTT
TCGGCCTACGCGAAAGGCGGCCTCGTCGATTCGGCAGAGAAGCTGTTCGAGGAAATGCCA
GATAGGAATGTGGTTTCCTGGACTGCGATGGTGTCTGGGTACGCGCAGAACGGTCGGCAT
GAGGAAGCGGTGGAGACGTTCTTGGAGATGTGGGAGAGGGCAGGGGTACAACCGAATGAA
TTGACAGTGAGCAGTGTGCTGCCTGCATGCGCAGCAGTTGGGGCGATGGAGCTTGGGAGG
AAGGTGGAGGAGTATGCGAGGGGAAAAGGCCTCCTGAGGAATGTGTACGTGGCTAATGCA
CTACTGGAGATGTATTCCAAGTGTGGCAGCATTCGACAAGCTTGGCAGGTGTTTCAGGGT
ATCGGTCGTCAGCAGGATCTCTGTTCTTGGAACTCTATGATCATGGCATTTGCTGTGCAT
GGCCTGTGGAGGGAGGCCCTTGCCTTGTTCTATAAGTTGCGGGGGTCAAACCAGATGGTA
TTACTTTTGTTGGGGTCATCTTGGCTTGTACCCATGGAGGTTTGGTGA

Peptide Sequence

PEP ID

Os06t0125600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:1377416:1379454:1 gene:Os06g0125600 transcript:Os06t0125600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0125600-01)
Sequence

MEEAKQLHARALRRGVRLLQPLLLRVLAAGDHRYAARLLESYPAPPSAPLHNRLLHALAS
LHRPHPLLLPFFSRLHRLRLLTPLSFTLLFSSSSSSASSSTPFFLCSHSLLIKLGHFASS
DPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGGLVDSAEKLFEEMP
DRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGR
KVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVH
GLWREALALFYKLRGSNQMVLLLLGSSWLVPMEVW

Transcript Sequence

Transcript ID

Os06t0125600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:1377416:1379454:1 gene:Os06g0125600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0125600-01)
Sequence

CTACTCTTTGGACCTTCTCCAGCGACGATCTCTCGCCGCCACCAGCCACCCGCCACCCGC
CGCCGCTCGCCGCCCGCCGCCGACGGCGCGGCCGCGCTCTTCTCCGGTCCACTACCGTCA
GTGAGCTCAGCATCCTCTCGAGCCGCCGGCGTCGTCGTGTCTGAAACGACTAGCACGGTG
CCTTGTGTTTCCCATGTTCCATGGAGGAGGCGAAGCAGCTGCACGCGCGCGCGCTCCGCC
GCGGGGTGCGCCTGCTGCAGCCGCTGCTCCTCCGCGTCCTCGCCGCCGGCGACCACCGCT
ACGCCGCGCGCCTCCTCGAATCCTACCCGGCGCCTCCTTCGGCGCCGCTCCACAACCGCC
TCCTCCATGCTCTCGCCTCCCTCCACCGCCCCCACCCCCTCCTCCTCCCCTTCTTCTCCC
GCCTCCATCGCCTTCGCCTCCTCACTCCGCTGTCATTCACTCTCCTCTTCTCCTCCTCCT
CCTCGTCCGCCTCCTCCTCCACCCCCTTCTTCCTCTGCTCCCACTCCCTGCTTATCAAAT
TAGGCCACTTCGCATCAAGCGATCCCTTCCTCTCCTCCGCGCTTGTCTCATTCTACGCCA
AGAGCAAGCTCCTGGTTGAAGCCAGGAAGGTGTTCGACGAATTGACGTGCAGGGACACGG
CCGTGTACAATGCGCTTCTTTCGGCCTACGCGAAAGGCGGCCTCGTCGATTCGGCAGAGA
AGCTGTTCGAGGAAATGCCAGATAGGAATGTGGTTTCCTGGACTGCGATGGTGTCTGGGT
ACGCGCAGAACGGTCGGCATGAGGAAGCGGTGGAGACGTTCTTGGAGATGTGGGAGAGGG
CAGGGGTACAACCGAATGAATTGACAGTGAGCAGTGTGCTGCCTGCATGCGCAGCAGTTG
GGGCGATGGAGCTTGGGAGGAAGGTGGAGGAGTATGCGAGGGGAAAAGGCCTCCTGAGGA
ATGTGTACGTGGCTAATGCACTACTGGAGATGTATTCCAAGTGTGGCAGCATTCGACAAG
CTTGGCAGGTGTTTCAGGGTATCGGTCGTCAGCAGGATCTCTGTTCTTGGAACTCTATGA
TCATGGCATTTGCTGTGCATGGCCTGTGGAGGGAGGCCCTTGCCTTGTTCTATAAGTTGC
GGGGGTCAAACCAGATGGTATTACTTTTGTTGGGGTCATCTTGGCTTGTACCCATGGAGG
TTTGGTGAATGAAGGCAAGCTATTCTTTGACTCGATGGAAGCAGAGTTTAGTCTGAAACC
GAGAATTGAGCACTATGGCTGCATGGTTGACCTTCTCGGGCGTGCTGGTCTCCTGATTGA
ATCATACAGTCTGATTGCGAGCATGCCAGTGGAGCCTGACGCTGTCATCTGGGGGGCCTT
GCTTGGTGCTTGCAGCTTCCATGGCAATGTAGAACTAGCAGAATTAGCAATGGACAAGCT
CATCCACCTTGAGCCACAAAACACGGCAAACCTAGTGATCCTTTCAAACATATATGCGTC
ATCTGGCAAATGGGATGGTGTTGCCCAAGTATGGAAGTTACTAAAGGAGAAAGACCACAA
GAAATCAGCTGGGTACAGCTTCATTGAGTTAGATGGTACGATGCATAAGTTCCTTGTTGA
GGATAAGTCACATCCAAGATTTGAGGAAGTATACAATACCCTTAATAGTGTCACAATGAC
CATGAAGCTGGTTGGCTTGGAAAACCTGGAAGAATTGAAAGGCTAGGTTCTCTGTCAGTC
TTTGGTGTAGCCTGTAAGACACCAAGCAATGGGAATAAAACGTGACCAAGTAGTACAAGA
TTTCTTGTGAACT