Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0125000-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:1347280:1351207:-1 gene:Os06g0125000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR disease resistance protein homologue. (Os06t0125000-00)
Sequence	ATGGCGGAGACGGCGCTGAGCATGGCGAGGTCCATGCTGGGGGGCGCCATCAGCGCGGCT TCGGCGGCCGCCGGCGAAGAGATGAGCTTGCTCATGGGTGTGCAGAAGGAGATATGGTTC ATGAATGATGAGCTAAAAACAATGCAAGCGTTCCTAATAGCTGCTGAAACAATGAAGAAG AAGGACCTGCTGTTGAAGGTGTGGGCTGAGCAAGTAAGGAGCTTGTCCTACGACATTGAA GATTGTCTTGAAGAGTTTATGGTCCATGTCGGAAACCAAAGCCTCTTGCAGCAATTGACA AATCTCAAAGATCGCCACCGAATAGCTGTCAAGATTCGCAACCTCAAATCAAGACTTGAA GAAGTGAGCAGCAGAAACACACGTTACAACTCGATCAAGATGGAGGCGAACAACACCTTC GATGAGATCGAGTCCATGGAGGATGTTCGGAATCATTCTCGTAGCAACATCGACGAAGCA AAGCTTGTAGGCTTTGACACCCCCAAAAAGGAGTTACTTGACAAGATAAACATGGATGCC AATGATGATGACCACTGTCGGGTGCTTTGTGTGGTTGGCATGGGAGGATTGGGTAAGACT ACTCTGGTAAGGAAGATCTTTGAAAGTAAGGAAGACATCATAAATAATTTTCCACATCGT GCTTGGATCGTTGTGTCACAGTCATTTTCGATGATAGAGATGCTCAAAGATATGATTAGC CAACTTCTAGGTCATGAATCATTGAAAAGATTTGAAGGGAAGCCGATCCGAGCACACGAC CTTGGTACGCACCTACGAGATGGACTGAAAGAATTGAGGTACTTTGTTGTTTTTGATGAC TTGTGGAACACAGATCACTGGGAATGGATTAGGGAATTTGCTTTGCCTAGTAAAAACAAC AAAAGGAGTCGGGTGATTGTAACAACCAGATTAGATGGAGTAGCTAATGCATGCACCACT GAACCATTTGTCTACCGCCTTAAGCTCCTAGAGACGGAATGTGCCATAGATTTGCTACTA AGGAAGATGGGGGAAAGTAAAGAAGATATGAAGAATGATAACAACCTGAAGAGCATAGTT ACACAATTAGTAAAAAAGTGTGGTTGTTTACCACTAGCCATAGTAACGATAGGAGCAATG TTTGCTAATAAACCTTCGTCGAAGTGGGAAGAAATGTGCAGACAACTTCCTTCAGAGCTT GAGAACAACCCAAGCCCTGGAGTCGAAGCAATAAGGAGGGTGGTGACCCTAAGCTATGGC CATTTGCCATCTCATCTTAAACCATGCTATCTATATCTAAGCATTTTTCCTGAGGATATT GAAATTAAAAGGAGGCATTTGGTAAACAGATGGGTAGCGGAGGGGTTGGTTAGAGCTAGA GTTGGAATGACCATTAGTGATGTCGGAGAAAGCTACTTTGATGAGCTAATTAGCCGAAGT ATGATTCAACCATCAAGGGTGAATATGGAAGGACATGTTAAGAGCTGCCGGGTCCATGAT ATAATGCGTGATATTATAGTCTCAATTTCTAAAGAGGAGAATTTTGTTTACTCAACAGGA GATAATGTATCTACAGTAATAGTGGAGAAGTTCCGTCATCTGTCATGCCATGGCGGCAAC TACCCAATAGTTGGAATGGATTTCAGTCGTGTCCGATCGTTAACTGTATTTGGTGAGTTT GATCAGAGACCCATGTTGGTGGGCTCTTCAATTTGTTCAGCTCAATTCACGATGCTAAGA GTCTTGGATCTAGAGAATGCAGTATTTTCAGTGACACAAAAAGACATAAACAAAATTGGG TTGTTGCGGCACTTGAGATATTTGAATACGCATACTAGAAGACGGTCCACTATTTATGCA CTTCCAAGCTCTATCGGGAAATTACAGAACTTACAAGTTTTGGACATAAGAGAGAGTGAA ATTTCTACACTACCAACTGATATCAGTAAGCTCCTTATGCTTCGTATCCTCCGTTGTAGC AAGGGACCGTGGTACTTCTACTTCTATTTTGATCCAGATGAACCAATAAAATGCTTGAAG CATACGTTGCGCATGCCCTTGATGTTGACACCATTAGTTGGTTCTGCAGCACGCAATTAT ACTATTGCTGAGCTACACAGGGCCTACTCTAGCCATTGGTCAGAGACACCAGGCGTGAGG GTTCCAACAGGAATCAGCAAACTAAAGGAGTTGCAGGTCTTAGAGGTTGTAGACCTTAAA CTAACTAAAAGCAAAGCAATTGAAGAGCTGGGTGAACTTCGCTGGCTACAAAAATTACGG GTGTCAACAAAGGGGGCCCAGGACAAGAAGCGCAAGACACTTTGTGAAGCCATCGAGAAG CTATCATCCCTCCAATCTCTCTGTGTTTATGAGGGTTACTACTTCATAACTGGGACACTT GAGTGGCTGGGTCCTTGCAATTTCTCCCCTCCTCCCCTGCTGAGAAAGCTAGAGTTGCAT GGACGTATTCGCGTGATGCCCGACTCTTTTAGGAACCTTAAGCAGCTGCGGAAGATTTTT TTGCGGCTAAGCGAACTAGATGGTAGAGCCATAGAGATACTTGGAACACTACCCAACCTC ATGCTCCTGAATCTCGATGGCAGAGCATATGTTGGGAATGAATTAGCATTCAAAAAGCAC GAGTTCCCAAATCTCAAGGAGCTTCGTATCAGTATGCTGTCCGAACTAAGAGGGATAAGA TTTGAGAAGGACGCCTTGCCCCACATGGAAAGAATGGAAATCGAATGTTGCCAGTTGAGA TCAGGGATTGTTGGCATCAAGCACCTCGAACAGCTCAACGAGATTTCACTTGGGTGTGAT GTGGCGGGGCTTGATCTGCTGGAACAGGAAGTAAAGGCGCACCCCAAGACACCCGCATTG CGGCTGCTTCAAGACCGAAGCAAAATCGACTTGGGGCTCCCTGTAGTCCTGACGAAAGAC GAAGGCTCCAATGTTGAAGAGGAAGCAAAGGAATCCGTCCATGACGATGCCGGGGAGAGC TCGCAAGTGATCTCATCACCGTGA

Peptide Sequence

PEP ID	Os06t0125000-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:1347280:1351207:-1 gene:Os06g0125000 transcript:Os06t0125000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR disease resistance protein homologue. (Os06t0125000-00)
Sequence	MAETALSMARSMLGGAISAASAAAGEEMSLLMGVQKEIWFMNDELKTMQAFLIAAETMKK KDLLLKVWAEQVRSLSYDIEDCLEEFMVHVGNQSLLQQLTNLKDRHRIAVKIRNLKSRLE EVSSRNTRYNSIKMEANNTFDEIESMEDVRNHSRSNIDEAKLVGFDTPKKELLDKINMDA NDDDHCRVLCVVGMGGLGKTTLVRKIFESKEDIINNFPHRAWIVVSQSFSMIEMLKDMIS QLLGHESLKRFEGKPIRAHDLGTHLRDGLKELRYFVVFDDLWNTDHWEWIREFALPSKNN KRSRVIVTTRLDGVANACTTEPFVYRLKLLETECAIDLLLRKMGESKEDMKNDNNLKSIV TQLVKKCGCLPLAIVTIGAMFANKPSSKWEEMCRQLPSELENNPSPGVEAIRRVVTLSYG HLPSHLKPCYLYLSIFPEDIEIKRRHLVNRWVAEGLVRARVGMTISDVGESYFDELISRS MIQPSRVNMEGHVKSCRVHDIMRDIIVSISKEENFVYSTGDNVSTVIVEKFRHLSCHGGN YPIVGMDFSRVRSLTVFGEFDQRPMLVGSSICSAQFTMLRVLDLENAVFSVTQKDINKIG LLRHLRYLNTHTRRRSTIYALPSSIGKLQNLQVLDIRESEISTLPTDISKLLMLRILRCS KGPWYFYFYFDPDEPIKCLKHTLRMPLMLTPLVGSAARNYTIAELHRAYSSHWSETPGVR VPTGISKLKELQVLEVVDLKLTKSKAIEELGELRWLQKLRVSTKGAQDKKRKTLCEAIEK LSSLQSLCVYEGYYFITGTLEWLGPCNFSPPPLLRKLELHGRIRVMPDSFRNLKQLRKIF LRLSELDGRAIEILGTLPNLMLLNLDGRAYVGNELAFKKHEFPNLKELRISMLSELRGIR FEKDALPHMERMEIECCQLRSGIVGIKHLEQLNEISLGCDVAGLDLLEQEVKAHPKTPAL RLLQDRSKIDLGLPVVLTKDEGSNVEEEAKESVHDDAGESSQVISSP

Transcript Sequence

Transcript ID	Os06t0125000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1347280:1351207:-1 gene:Os06g0125000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR disease resistance protein homologue. (Os06t0125000-00)
Sequence	AAGGAGTAAATTAAAGCAAGCGAGATGGCGGAGACGGCGCTGAGCATGGCGAGGTCCATG CTGGGGGGCGCCATCAGCGCGGCTTCGGCGGCCGCCGGCGAAGAGATGAGCTTGCTCATG GGTGTGCAGAAGGAGATATGGTTCATGAATGATGAGCTAAAAACAATGCAAGCGTTCCTA ATAGCTGCTGAAACAATGAAGAAGAAGGACCTGCTGTTGAAGGTGTGGGCTGAGCAAGTA AGGAGCTTGTCCTACGACATTGAAGATTGTCTTGAAGAGTTTATGGTCCATGTCGGAAAC CAAAGCCTCTTGCAGCAATTGACAAATCTCAAAGATCGCCACCGAATAGCTGTCAAGATT CGCAACCTCAAATCAAGACTTGAAGAAGTGAGCAGCAGAAACACACGTTACAACTCGATC AAGATGGAGGCGAACAACACCTTCGATGAGATCGAGTCCATGGAGGATGTTCGGAATCAT TCTCGTAGCAACATCGACGAAGCAAAGCTTGTAGGCTTTGACACCCCCAAAAAGGAGTTA CTTGACAAGATAAACATGGATGCCAATGATGATGACCACTGTCGGGTGCTTTGTGTGGTT GGCATGGGAGGATTGGGTAAGACTACTCTGGTAAGGAAGATCTTTGAAAGTAAGGAAGAC ATCATAAATAATTTTCCACATCGTGCTTGGATCGTTGTGTCACAGTCATTTTCGATGATA GAGATGCTCAAAGATATGATTAGCCAACTTCTAGGTCATGAATCATTGAAAAGATTTGAA GGGAAGCCGATCCGAGCACACGACCTTGGTACGCACCTACGAGATGGACTGAAAGAATTG AGGTACTTTGTTGTTTTTGATGACTTGTGGAACACAGATCACTGGGAATGGATTAGGGAA TTTGCTTTGCCTAGTAAAAACAACAAAAGGAGTCGGGTGATTGTAACAACCAGATTAGAT GGAGTAGCTAATGCATGCACCACTGAACCATTTGTCTACCGCCTTAAGCTCCTAGAGACG GAATGTGCCATAGATTTGCTACTAAGGAAGATGGGGGAAAGTAAAGAAGATATGAAGAAT GATAACAACCTGAAGAGCATAGTTACACAATTAGTAAAAAAGTGTGGTTGTTTACCACTA GCCATAGTAACGATAGGAGCAATGTTTGCTAATAAACCTTCGTCGAAGTGGGAAGAAATG TGCAGACAACTTCCTTCAGAGCTTGAGAACAACCCAAGCCCTGGAGTCGAAGCAATAAGG AGGGTGGTGACCCTAAGCTATGGCCATTTGCCATCTCATCTTAAACCATGCTATCTATAT CTAAGCATTTTTCCTGAGGATATTGAAATTAAAAGGAGGCATTTGGTAAACAGATGGGTA GCGGAGGGGTTGGTTAGAGCTAGAGTTGGAATGACCATTAGTGATGTCGGAGAAAGCTAC TTTGATGAGCTAATTAGCCGAAGTATGATTCAACCATCAAGGGTGAATATGGAAGGACAT GTTAAGAGCTGCCGGGTCCATGATATAATGCGTGATATTATAGTCTCAATTTCTAAAGAG GAGAATTTTGTTTACTCAACAGGAGATAATGTATCTACAGTAATAGTGGAGAAGTTCCGT CATCTGTCATGCCATGGCGGCAACTACCCAATAGTTGGAATGGATTTCAGTCGTGTCCGA TCGTTAACTGTATTTGGTGAGTTTGATCAGAGACCCATGTTGGTGGGCTCTTCAATTTGT TCAGCTCAATTCACGATGCTAAGAGTCTTGGATCTAGAGAATGCAGTATTTTCAGTGACA CAAAAAGACATAAACAAAATTGGGTTGTTGCGGCACTTGAGATATTTGAATACGCATACT AGAAGACGGTCCACTATTTATGCACTTCCAAGCTCTATCGGGAAATTACAGAACTTACAA GTTTTGGACATAAGAGAGAGTGAAATTTCTACACTACCAACTGATATCAGTAAGCTCCTT ATGCTTCGTATCCTCCGTTGTAGCAAGGGACCGTGGTACTTCTACTTCTATTTTGATCCA GATGAACCAATAAAATGCTTGAAGCATACGTTGCGCATGCCCTTGATGTTGACACCATTA GTTGGTTCTGCAGCACGCAATTATACTATTGCTGAGCTACACAGGGCCTACTCTAGCCAT TGGTCAGAGACACCAGGCGTGAGGGTTCCAACAGGAATCAGCAAACTAAAGGAGTTGCAG GTCTTAGAGGTTGTAGACCTTAAACTAACTAAAAGCAAAGCAATTGAAGAGCTGGGTGAA CTTCGCTGGCTACAAAAATTACGGGTGTCAACAAAGGGGGCCCAGGACAAGAAGCGCAAG ACACTTTGTGAAGCCATCGAGAAGCTATCATCCCTCCAATCTCTCTGTGTTTATGAGGGT TACTACTTCATAACTGGGACACTTGAGTGGCTGGGTCCTTGCAATTTCTCCCCTCCTCCC CTGCTGAGAAAGCTAGAGTTGCATGGACGTATTCGCGTGATGCCCGACTCTTTTAGGAAC CTTAAGCAGCTGCGGAAGATTTTTTTGCGGCTAAGCGAACTAGATGGTAGAGCCATAGAG ATACTTGGAACACTACCCAACCTCATGCTCCTGAATCTCGATGGCAGAGCATATGTTGGG AATGAATTAGCATTCAAAAAGCACGAGTTCCCAAATCTCAAGGAGCTTCGTATCAGTATG CTGTCCGAACTAAGAGGGATAAGATTTGAGAAGGACGCCTTGCCCCACATGGAAAGAATG GAAATCGAATGTTGCCAGTTGAGATCAGGGATTGTTGGCATCAAGCACCTCGAACAGCTC AACGAGATTTCACTTGGGTGTGATGTGGCGGGGCTTGATCTGCTGGAACAGGAAGTAAAG GCGCACCCCAAGACACCCGCATTGCGGCTGCTTCAAGACCGAAGCAAAATCGACTTGGGG CTCCCTGTAGTCCTGACGAAAGACGAAGGCTCCAATGTTGAAGAGGAAGCAAAGGAATCC GTCCATGACGATGCCGGGGAGAGCTCGCAAGTGATCTCATCACCGTGA