Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0122200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:1172581:1175250:1 gene:Os06g0122200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 domain containing protein. (Os06t0122200-01)
Sequence	ATGAGGGGCGATGGTGCTGGCAGTGGTAGCTACGAGTACTTGAGCTGCCAGAAAACCACC GGGATGATCTGGAACCTGACCTCCTCCTACACCGACAAGAGCAATGAGGCATCCATGGTG TCCGCCTCCCTCATCGTCTTCGCCCTCGCCGCCCTCTTCTTCAACCTCAACCTCTTCAGC GGCATCTCCGACGTCGGCGCCATCCTCGACCCCAAGGTCCGCGTCATCCTCTCCAAGGCG CTCTCGCTCTTCCTCCCCGTCATGTCCTACCTCTTCTCCGAGGCCAAGAACGCCGGTGCC GCCGCCTCCGCCGCCGGCGGTAGCACGGGCTCGCTCGAGCTCGAGCTCTCGCTGCGGGCG CGGCTGATCCTCGTGTGGATGCTCCTCGTCGAGCTGCTCCGCAAGAAGGTGGAGGAGATT CGGATGGAGGCATGGCACGCCGGCACCGTCGAGCGCGCCGGCCGCGTCGCGTGGCTCGGC AGCCTCGTCTTCTTCAACCTCCGCGCCGCCGGCCGCAAGGCCGTGTTCGGCATCCTGTGG ACTCTCTGCGCCGCCAAGCTGGTGCAGCGGATGACCTACACCGAGGTCGGCAAGCGCTCC TTCGCCTACGGCAAGAACGCCAAGCTCGTCATCTCCTACATGGCGCAGATGCTTCAGAAC GATGCCGAGGTCGAGCTCGAGCACCACCCCCATGGCTGCCATGGCGGGGACGAGCTCTTG AGGAGATGCAAGTATTTGGTGATGGGAGAAGAAGGCCTGGTGATCGAACCGATCAACTCC GGCTACAGGATCACCGGCGACATCGACGCCGTCACCACCGTCGGCAAGATCTGGACCCTC GCCGAGAGCGACCATCTCCTCGCGTCGCTCGACATGGACCATCGCCTCAGGAGGCTCTGC GTGTCGTTCGCGCTCTTCAAGCTGCTGCGCCGGAGCTTCGAGCGCCTGCCGCCGATGACC GAGGCGGAGACCCGCCATTGCCGGGACCTCCTCTTCAGAGGCCTGTACGCCGGCGCCGGA GACGGAGACGGAGGCGGAGCGGAGGCGTTGTTCGAGGTGATGAGCGATGAGGCCAACTTC GTGGCCGAGTACTACCACTCCGTCGTCCCCGTGGTGCTCGCGAGCCCCTTCTTCCTGCTC GCCAACTACGTCCTCCTCCCGCTCGTCGTGCTCGTGCTCTGCCTCGTCGTCGTCGTGCTC TGCGGCAACGGCGACGTGCTCTTCTCCCTCCGAAGCATCGAGAGCGACAACTACACCATG TCGTCCGGCGGCGTGGCGACCATGGCGAGGTGCCTGCTGCGGGCCGTCGCGACGTCGCCG GCGGCGTTCTTCACAGCCATCGACCTCTCCATCACGTCGCTCCTCTTCCTCGTGCTCGTG TACGAGGAGGTGTGGGAGTTCGTCGTCTTCCTCCTCTCCAACTGGTTCATGGTGTCGCTG CTGCACGCGTACGCGTCGTCGAACGCACGGTGGCGCGACAGCGCCGCGTTCCGGTGGGCG ATCCGGCGCATCCTGTGGGCGCGGAGCAAGATGCTGAGCCACCATGGCCTCCGCTTCAAG CAGTTCTCCGTTCTGAGCTCTTGCCGGCTCTCGCTGACGCTGCCGGCCGCCGTGTCGCTC GCGCTGGCGATCCTGCCCGCCGTGTCGGTGCCCTGCCAAGTGAAGCAATCCATCGCGGAG TACATGGCCAAGTCGCTGTACGACGGCGGCGACGGAATGTCCGCCGTCGCAGAGCACCCG GAGCTGTTGCCGTTCTGCGCGAGCGGCGGCGGCGGCGGCGGCGGCGTCGGCGTCGTGGAG GTCATCCTGACATGGCACATCGCCACCGCCATCCTGGAGGAGAAGTGCCCACCGGCGGCG TCCCAGAGCGACGACGCCATCGTGGCGAGGACGCTGTCCAGGTACATGGCCTACCTGGTG GCGTTCCACCCGGAGCTCCTCCCCGGCAACCAGGACAGCACGGAGCTCGTGTTCCAGGCC ATGAACGACGAGCTGAAGCAGGTGCTCGGCTTCTGGGGCTACCACCTCCGGCCATTGCTA ATGCTAATGCTGCGGCGCACCAGGAGGTTCGAGTGCGACATGGTCGTCATGGCCGGAGTC GCCGAGCGGCGGCCGGCGAGCAAGCAGCAGCAGCAGGAAATGACGGTGTTGCAGAAGGGC GCGGCGCTGGGGCGCGCGCTGGTGGAGAAAGCGGGGAGGGATGGTGCCGGCGGCGGGGTG TGGAAGGTGGTGGGCGATGTGTGGGTAGAGCTCGCCGTGGAGGTGGCGCCGGCGAGCGAC GAGGAGCGCGTGATGGGGCACAGGAAGGTGTTGCCGGAGGGCGGCGAGTTCGTGACCGTG CTCTGGGCGCTCGCCGTGCACACCGGCATAAGCCGCCGCCTGGCTGTCACGCTCACGCCG CCGGACACGATGGATCGTGTTTGA

Peptide Sequence

PEP ID	Os06t0122200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:1172581:1175250:1 gene:Os06g0122200 transcript:Os06t0122200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 domain containing protein. (Os06t0122200-01)
Sequence	MRGDGAGSGSYEYLSCQKTTGMIWNLTSSYTDKSNEASMVSASLIVFALAALFFNLNLFS GISDVGAILDPKVRVILSKALSLFLPVMSYLFSEAKNAGAAASAAGGSTGSLELELSLRA RLILVWMLLVELLRKKVEEIRMEAWHAGTVERAGRVAWLGSLVFFNLRAAGRKAVFGILW TLCAAKLVQRMTYTEVGKRSFAYGKNAKLVISYMAQMLQNDAEVELEHHPHGCHGGDELL RRCKYLVMGEEGLVIEPINSGYRITGDIDAVTTVGKIWTLAESDHLLASLDMDHRLRRLC VSFALFKLLRRSFERLPPMTEAETRHCRDLLFRGLYAGAGDGDGGGAEALFEVMSDEANF VAEYYHSVVPVVLASPFFLLANYVLLPLVVLVLCLVVVVLCGNGDVLFSLRSIESDNYTM SSGGVATMARCLLRAVATSPAAFFTAIDLSITSLLFLVLVYEEVWEFVVFLLSNWFMVSL LHAYASSNARWRDSAAFRWAIRRILWARSKMLSHHGLRFKQFSVLSSCRLSLTLPAAVSL ALAILPAVSVPCQVKQSIAEYMAKSLYDGGDGMSAVAEHPELLPFCASGGGGGGGVGVVE VILTWHIATAILEEKCPPAASQSDDAIVARTLSRYMAYLVAFHPELLPGNQDSTELVFQA MNDELKQVLGFWGYHLRPLLMLMLRRTRRFECDMVVMAGVAERRPASKQQQQEMTVLQKG AALGRALVEKAGRDGAGGGVWKVVGDVWVELAVEVAPASDEERVMGHRKVLPEGGEFVTV LWALAVHTGISRRLAVTLTPPDTMDRV

Transcript Sequence

Transcript ID	Os06t0122200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1172581:1175250:1 gene:Os06g0122200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 domain containing protein. (Os06t0122200-01)
Sequence	ACTGACCACTGTCGCCATTGTCGCCAAGAGCTTAGAGCTTCTTCTATCCTCGAGCACAAG CACGGCTGCACGGCAATGGCGATCATAAATTAAGCCAAGCTCGTCGAGCTAGGTACGGGG TAGTAAGCAAGCAAGATGAGGGGCGATGGTGCTGGCAGTGGTAGCTACGAGTACTTGAGC TGCCAGAAAACCACCGGGATGATCTGGAACCTGACCTCCTCCTACACCGACAAGAGCAAT GAGGCATCCATGGTGTCCGCCTCCCTCATCGTCTTCGCCCTCGCCGCCCTCTTCTTCAAC CTCAACCTCTTCAGCGGCATCTCCGACGTCGGCGCCATCCTCGACCCCAAGGTCCGCGTC ATCCTCTCCAAGGCGCTCTCGCTCTTCCTCCCCGTCATGTCCTACCTCTTCTCCGAGGCC AAGAACGCCGGTGCCGCCGCCTCCGCCGCCGGCGGTAGCACGGGCTCGCTCGAGCTCGAG CTCTCGCTGCGGGCGCGGCTGATCCTCGTGTGGATGCTCCTCGTCGAGCTGCTCCGCAAG AAGGTGGAGGAGATTCGGATGGAGGCATGGCACGCCGGCACCGTCGAGCGCGCCGGCCGC GTCGCGTGGCTCGGCAGCCTCGTCTTCTTCAACCTCCGCGCCGCCGGCCGCAAGGCCGTG TTCGGCATCCTGTGGACTCTCTGCGCCGCCAAGCTGGTGCAGCGGATGACCTACACCGAG GTCGGCAAGCGCTCCTTCGCCTACGGCAAGAACGCCAAGCTCGTCATCTCCTACATGGCG CAGATGCTTCAGAACGATGCCGAGGTCGAGCTCGAGCACCACCCCCATGGCTGCCATGGC GGGGACGAGCTCTTGAGGAGATGCAAGTATTTGGTGATGGGAGAAGAAGGCCTGGTGATC GAACCGATCAACTCCGGCTACAGGATCACCGGCGACATCGACGCCGTCACCACCGTCGGC AAGATCTGGACCCTCGCCGAGAGCGACCATCTCCTCGCGTCGCTCGACATGGACCATCGC CTCAGGAGGCTCTGCGTGTCGTTCGCGCTCTTCAAGCTGCTGCGCCGGAGCTTCGAGCGC CTGCCGCCGATGACCGAGGCGGAGACCCGCCATTGCCGGGACCTCCTCTTCAGAGGCCTG TACGCCGGCGCCGGAGACGGAGACGGAGGCGGAGCGGAGGCGTTGTTCGAGGTGATGAGC GATGAGGCCAACTTCGTGGCCGAGTACTACCACTCCGTCGTCCCCGTGGTGCTCGCGAGC CCCTTCTTCCTGCTCGCCAACTACGTCCTCCTCCCGCTCGTCGTGCTCGTGCTCTGCCTC GTCGTCGTCGTGCTCTGCGGCAACGGCGACGTGCTCTTCTCCCTCCGAAGCATCGAGAGC GACAACTACACCATGTCGTCCGGCGGCGTGGCGACCATGGCGAGGTGCCTGCTGCGGGCC GTCGCGACGTCGCCGGCGGCGTTCTTCACAGCCATCGACCTCTCCATCACGTCGCTCCTC TTCCTCGTGCTCGTGTACGAGGAGGTGTGGGAGTTCGTCGTCTTCCTCCTCTCCAACTGG TTCATGGTGTCGCTGCTGCACGCGTACGCGTCGTCGAACGCACGGTGGCGCGACAGCGCC GCGTTCCGGTGGGCGATCCGGCGCATCCTGTGGGCGCGGAGCAAGATGCTGAGCCACCAT GGCCTCCGCTTCAAGCAGTTCTCCGTTCTGAGCTCTTGCCGGCTCTCGCTGACGCTGCCG GCCGCCGTGTCGCTCGCGCTGGCGATCCTGCCCGCCGTGTCGGTGCCCTGCCAAGTGAAG CAATCCATCGCGGAGTACATGGCCAAGTCGCTGTACGACGGCGGCGACGGAATGTCCGCC GTCGCAGAGCACCCGGAGCTGTTGCCGTTCTGCGCGAGCGGCGGCGGCGGCGGCGGCGGC GTCGGCGTCGTGGAGGTCATCCTGACATGGCACATCGCCACCGCCATCCTGGAGGAGAAG TGCCCACCGGCGGCGTCCCAGAGCGACGACGCCATCGTGGCGAGGACGCTGTCCAGGTAC ATGGCCTACCTGGTGGCGTTCCACCCGGAGCTCCTCCCCGGCAACCAGGACAGCACGGAG CTCGTGTTCCAGGCCATGAACGACGAGCTGAAGCAGGTGCTCGGCTTCTGGGGCTACCAC CTCCGGCCATTGCTAATGCTAATGCTGCGGCGCACCAGGAGGTTCGAGTGCGACATGGTC GTCATGGCCGGAGTCGCCGAGCGGCGGCCGGCGAGCAAGCAGCAGCAGCAGGAAATGACG GTGTTGCAGAAGGGCGCGGCGCTGGGGCGCGCGCTGGTGGAGAAAGCGGGGAGGGATGGT GCCGGCGGCGGGGTGTGGAAGGTGGTGGGCGATGTGTGGGTAGAGCTCGCCGTGGAGGTG GCGCCGGCGAGCGACGAGGAGCGCGTGATGGGGCACAGGAAGGTGTTGCCGGAGGGCGGC GAGTTCGTGACCGTGCTCTGGGCGCTCGCCGTGCACACCGGCATAAGCCGCCGCCTGGCT GTCACGCTCACGCCGCCGGACACGATGGATCGTGTTTGAGTACCCATTCTAAACATTAGA GGGGACATCTCGAGAGAATTCGTTCTGAGCATGTTATCTAAATAGTTATGATTTTATAAA AAAGTTCAACAAGATATATTAATATGTGAT