Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0120200-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:1090058:1092625:1 gene:Os06g0120200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 family protein. (Os06t0120200-01)
Sequence	ATGACGTCCGTGACCTCAGATTTGCTGCAGTCGTGTTCGGAAACCATGATTTCATTCGTC CACAACATGACGGCTTCCTACGCCGACAAGAGCAACGAGTCCTCCGTGGTGTCCACCTCC GTCGTCATGTTCATCCTCGCCGCCGTCTTCTTCAACCTCAACCTCTTCAGCGGCGTCTCC GACGTCAGCGCCGTGCTCAACCCCACCGTCCGCATCTTCCTCTCCAGCGCGCTCAACCTC TTCCTCCCCGTCATGTCCTACCTCTTCTCCGAGGCCAAGCAAGCGCCGCTCGGAGTCGGC GACTCCACTACCACCACCAGAGACGCCCACTCCGATGACCTCTCGCTGCTGGCGCGTGTC ATCCTCACATGGATGCTCCTCGTCGAGCTCCTCCGCAAGAAGGTGGAGGCCATCCTCATC ACCACCGGCATGCACGTCTACTCCAGCCTCATCAGTCACGCCACCAGCGTCGCCTGGCTG GGCAACCTCGTCTTCTTCAACCTCCAGGCCGCCGGCAAGAAGGCGCTGTTCGGCGTCCTC TGGGTGCTCTGCGCGGCCAAGCTGGTGCAGCGCGTCGCCATCACCGAGATCGGGAAGCGC TCCTTCGCCCATGGCAAGAACGCCCGCCTCATCTCCTCCTACATGGCGCAGCTGCCAAAG CTGCTCGAGGTGGATGAGCATGTCGCCGCCGACGGCAGCAGGATGGAGCGGTGCAACTTC GCCGTGATGGGGGAAGAGAACATGGTGCTCAAGGCCGGACCACACGGCTACGAGCTCGAC CTCGGCCTCGCCGCCGCCGTCGTCACCGTCGGGAAAATCTGGCAGACCAAACAACACCCA AGGCTCAAGAGGCTCTGCCTCTCCTTCGCTCTCTTCAAGCTTCTGCGCCGCCGGTTCGAG AACCTGCCGCCGGCGACCATGAAGGAGACCGACGAGTGCCGGGACCTCATCTTGGACGGC ATGTGCAAGGATGCTCAGGCCACCGGCGACGTCCCGGCGGAGGTGGCGCTGTTCCAGGTG CTCAACGACGAGGTGAACTTCCTGGCCGAGTACTACCACTCCGTCCTCCCCGTGGTGCTC GCGAGCCCCTACTTCTTCGTCGTCAACTACCTCTGCTTCCCCGTCGTCGTGTTCGGCCTC TGCGTCATGACCATCGTCCTCTGCGGCAATGGCAACGTCTTGTACGCCTTCAAGAGCCTA ACCAACGACAACTATGCCGTCTCATCCGGCATACTCTCGCTGACGAAATGCCTCTGGAAA AACGTCGTCAGGTCTCCGCTGGTGTTCTTCTCCATCGTCGACGTCTCCATCTGCTACCTC CTCTTCATCGTCGTCGTCTACGAGGAGGTGTGGGAGTTCGTCGTCTTCCTCCTCTCCAAC TGGTTCATCGTCTCTCTGCTCTGCACCTTCTCCGCCAAGCCCCGCCGCCGCGAGAGCCCC ACCTTCCGTGGCTCCGTCCGCTGCATCCTCTGGCTCCGCCGAAACCTCAGCCACTACCCT AGCCTCATCACCATCAAGCAGTTCACCGTCCTGAGCACATGCTGCCTGTCGCCGAGGTTG CCCACCGCCACGCTGCCCAGGCATGCGAAGCTCGCCATCCTAGAACGCTTCCGCGGCGGC GATCCTCTCAGCAACGGCGGCGCCGTGCTGACGTCGATGGGCGGTAGGCACCGGCGGTTC TCGCGGCTCTCGTGGGCGTGCCAGAGCGGAGCCGTCGCGGAGGTGATCCTCACCTGGCAC ATCGCCACCAGCCTCCTGGAGACGAAGCAGCAGCAGCAGCTTCCGACAAGTGCCAGCCGG AGCCGGAGGACGGCGGCGAGGCTGTCCAGATACTGCGCCTACCTCGTCGCCTTCCGGCCG GAGCTGCTGCCGGACGACCGGGAAGGCACGGAGCGCATCTACAAGGACCTGAAGAAGGGC ATCAAGGCGGCGCTCGGCGGCGCACGGGGATACTACCTCTCGTCGGAGCGGAGCCGGCAC GAGACGATCCGTGCGCTCCGGGTGGACGCCTCCGCCGCCGCCGACATGACGGTGCTCGAG AGGGGCGCCGTGCTGGGGAAGCAGCTGGTGGAGGACGACGAAGCCGGCGACGGCGCGGTG TGGGAGATGCTGGCCGACGTGTGGGTTGAGCTCGTCGTGTACGTGTCGCCGTCGCGCGCG GAGGAGCACGCCAGGGGGCACGAGGCGGCGCTGGCGCAGGGCAGCGAACTCGTGACGCTG CTCTGGGTGCTCGCCACGCACACCGGCATCGCCCGCCCGGACCACGACGGCGAAATCGAC CAGCCGGCGGCGCCGGCATAG

Peptide Sequence

PEP ID	Os06t0120200-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:1090058:1092625:1 gene:Os06g0120200 transcript:Os06t0120200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 family protein. (Os06t0120200-01)
Sequence	MTSVTSDLLQSCSETMISFVHNMTASYADKSNESSVVSTSVVMFILAAVFFNLNLFSGVS DVSAVLNPTVRIFLSSALNLFLPVMSYLFSEAKQAPLGVGDSTTTTRDAHSDDLSLLARV ILTWMLLVELLRKKVEAILITTGMHVYSSLISHATSVAWLGNLVFFNLQAAGKKALFGVL WVLCAAKLVQRVAITEIGKRSFAHGKNARLISSYMAQLPKLLEVDEHVAADGSRMERCNF AVMGEENMVLKAGPHGYELDLGLAAAVVTVGKIWQTKQHPRLKRLCLSFALFKLLRRRFE NLPPATMKETDECRDLILDGMCKDAQATGDVPAEVALFQVLNDEVNFLAEYYHSVLPVVL ASPYFFVVNYLCFPVVVFGLCVMTIVLCGNGNVLYAFKSLTNDNYAVSSGILSLTKCLWK NVVRSPLVFFSIVDVSICYLLFIVVVYEEVWEFVVFLLSNWFIVSLLCTFSAKPRRRESP TFRGSVRCILWLRRNLSHYPSLITIKQFTVLSTCCLSPRLPTATLPRHAKLAILERFRGG DPLSNGGAVLTSMGGRHRRFSRLSWACQSGAVAEVILTWHIATSLLETKQQQQLPTSASR SRRTAARLSRYCAYLVAFRPELLPDDREGTERIYKDLKKGIKAALGGARGYYLSSERSRH ETIRALRVDASAAADMTVLERGAVLGKQLVEDDEAGDGAVWEMLADVWVELVVYVSPSRA EEHARGHEAALAQGSELVTLLWVLATHTGIARPDHDGEIDQPAAPA

Transcript Sequence

Transcript ID	Os06t0120200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1090058:1092625:1 gene:Os06g0120200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 family protein. (Os06t0120200-01)
Sequence	TAGGTAGGCAGGTGGCAAGATCGATCGAGCGATGACGTCCGTGACCTCAGATTTGCTGCA GTCGTGTTCGGAAACCATGATTTCATTCGTCCACAACATGACGGCTTCCTACGCCGACAA GAGCAACGAGTCCTCCGTGGTGTCCACCTCCGTCGTCATGTTCATCCTCGCCGCCGTCTT CTTCAACCTCAACCTCTTCAGCGGCGTCTCCGACGTCAGCGCCGTGCTCAACCCCACCGT CCGCATCTTCCTCTCCAGCGCGCTCAACCTCTTCCTCCCCGTCATGTCCTACCTCTTCTC CGAGGCCAAGCAAGCGCCGCTCGGAGTCGGCGACTCCACTACCACCACCAGAGACGCCCA CTCCGATGACCTCTCGCTGCTGGCGCGTGTCATCCTCACATGGATGCTCCTCGTCGAGCT CCTCCGCAAGAAGGTGGAGGCCATCCTCATCACCACCGGCATGCACGTCTACTCCAGCCT CATCAGTCACGCCACCAGCGTCGCCTGGCTGGGCAACCTCGTCTTCTTCAACCTCCAGGC CGCCGGCAAGAAGGCGCTGTTCGGCGTCCTCTGGGTGCTCTGCGCGGCCAAGCTGGTGCA GCGCGTCGCCATCACCGAGATCGGGAAGCGCTCCTTCGCCCATGGCAAGAACGCCCGCCT CATCTCCTCCTACATGGCGCAGCTGCCAAAGCTGCTCGAGGTGGATGAGCATGTCGCCGC CGACGGCAGCAGGATGGAGCGGTGCAACTTCGCCGTGATGGGGGAAGAGAACATGGTGCT CAAGGCCGGACCACACGGCTACGAGCTCGACCTCGGCCTCGCCGCCGCCGTCGTCACCGT CGGGAAAATCTGGCAGACCAAACAACACCCAAGGCTCAAGAGGCTCTGCCTCTCCTTCGC TCTCTTCAAGCTTCTGCGCCGCCGGTTCGAGAACCTGCCGCCGGCGACCATGAAGGAGAC CGACGAGTGCCGGGACCTCATCTTGGACGGCATGTGCAAGGATGCTCAGGCCACCGGCGA CGTCCCGGCGGAGGTGGCGCTGTTCCAGGTGCTCAACGACGAGGTGAACTTCCTGGCCGA GTACTACCACTCCGTCCTCCCCGTGGTGCTCGCGAGCCCCTACTTCTTCGTCGTCAACTA CCTCTGCTTCCCCGTCGTCGTGTTCGGCCTCTGCGTCATGACCATCGTCCTCTGCGGCAA TGGCAACGTCTTGTACGCCTTCAAGAGCCTAACCAACGACAACTATGCCGTCTCATCCGG CATACTCTCGCTGACGAAATGCCTCTGGAAAAACGTCGTCAGGTCTCCGCTGGTGTTCTT CTCCATCGTCGACGTCTCCATCTGCTACCTCCTCTTCATCGTCGTCGTCTACGAGGAGGT GTGGGAGTTCGTCGTCTTCCTCCTCTCCAACTGGTTCATCGTCTCTCTGCTCTGCACCTT CTCCGCCAAGCCCCGCCGCCGCGAGAGCCCCACCTTCCGTGGCTCCGTCCGCTGCATCCT CTGGCTCCGCCGAAACCTCAGCCACTACCCTAGCCTCATCACCATCAAGCAGTTCACCGT CCTGAGCACATGCTGCCTGTCGCCGAGGTTGCCCACCGCCACGCTGCCCAGGCATGCGAA GCTCGCCATCCTAGAACGCTTCCGCGGCGGCGATCCTCTCAGCAACGGCGGCGCCGTGCT GACGTCGATGGGCGGTAGGCACCGGCGGTTCTCGCGGCTCTCGTGGGCGTGCCAGAGCGG AGCCGTCGCGGAGGTGATCCTCACCTGGCACATCGCCACCAGCCTCCTGGAGACGAAGCA GCAGCAGCAGCTTCCGACAAGTGCCAGCCGGAGCCGGAGGACGGCGGCGAGGCTGTCCAG ATACTGCGCCTACCTCGTCGCCTTCCGGCCGGAGCTGCTGCCGGACGACCGGGAAGGCAC GGAGCGCATCTACAAGGACCTGAAGAAGGGCATCAAGGCGGCGCTCGGCGGCGCACGGGG ATACTACCTCTCGTCGGAGCGGAGCCGGCACGAGACGATCCGTGCGCTCCGGGTGGACGC CTCCGCCGCCGCCGACATGACGGTGCTCGAGAGGGGCGCCGTGCTGGGGAAGCAGCTGGT GGAGGACGACGAAGCCGGCGACGGCGCGGTGTGGGAGATGCTGGCCGACGTGTGGGTTGA GCTCGTCGTGTACGTGTCGCCGTCGCGCGCGGAGGAGCACGCCAGGGGGCACGAGGCGGC GCTGGCGCAGGGCAGCGAACTCGTGACGCTGCTCTGGGTGCTCGCCACGCACACCGGCAT CGCCCGCCCGGACCACGACGGCGAAATCGACCAGCCGGCGGCGCCGGCATAGCGGAGCTC GCTTGCATTGCGCGCATTGGCGCGAACACCAAGTAATTAATGCGGTGTACTCGGATGCTT ACGTCTACGTGTGCCCTGTGGTTTGGACGACATTGCTTTCCCGGCCATGTCTTGTTCGGT TTAATTTCCATCTCATGTGGAATCTCTCTTTGTTATTTGTGCTCTATTATATTTCCTTTT GCAATTGATGTCAAACATGTTAATTAATTTGTATATTTTGGCACTCCT