Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0119600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:1063563:1066532:-1 gene:Os06g0119600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os06t0119600-01)
Sequence	ATGATCGCCATGACTCCTCTTGGACTACTGCTAGTGCTTCTCGTCCTCTGTAGCTCCATT CTTGTTGCCCATGGAGGAGACGCTGCAGCCGGCGCCTATATGGTCATAGCAACCAGCACC ATGAAACCGAAAACTTTCTGCTCCGGCCACAAGGTTGCTCCAGGGGACGTGCCGTCGCCG AACAGCACTTGGGCACCGTTGCATCACCTGTATGGGCCATGCTCGCCGGCGCCGTCGTCG GCCAACAGCACCGCCGCCGACGTCGCCGCTTCCATGGCCGACATGGTCGACGACGACCAA CGCCGCGCGGACTACATCCAAAAGAGGCTCACCGGCGCCACCGACGACAAGCAGCCGATG GCCTTTTCGAGCAGAACCTCGCAATACGAGAAGAACGGCCAGTACGCCACTAATGGTGGC TTAGGCAGTGTGCCTCACCTCAAAAGTTTATCAACGACGGCGACGACGAATTCGGCGCCG GATGGCACGTCGGCGGTGACCCAGACGGTGATAATCGACTCCGGCAGCGACGTTTCATGG GTGCAATGCAAGCCATGCCCCTTGCCGATGTGCCACCGGCAACGGGACCCCCTGTTCGAC CCGGCCATGTCGACCACGTACGCCGCCGTCCCCTGCACCTCCGCCGCCTGCGCGCAGCTC GGCCCCTACCGCCGCGGCTGCTCCGCCAACGCGCAGTGCCAGTTCGGCATCAACTACGGC GACGGGTCGACGGCGACCGGGACGTACAGCTTCGACGACCTCACGCTGGGCCCCTACGAC GTCATCAGGGGCTTCCGCTTCGGCTGTGCGCATGCCGATAGGGGGAGTGCGTTCGACTAC GACGTCGCCGGGTCACTGGCGCTCGGCGGCGGCTCGCAGTCGCTGGTGCAGCAGACGGCG ACGCGGTACGGCAGGGTCTTCTCCTACTGCCTCCCGCCGACGGCGAGCTCCCTCGGCTTC CTCGTTCTCGGCGTGCCGCCGGAACGCGCCCAGCTCATCCCGAGCTTCGTCTCCACGCCA CTGCTGAGCAGCAGCATGGCGCCCACGTTCTACAGGGTGCTCCTCCGCGCCATCATCGTG GCGGGGCGCCCACTCGCCGTGCCACCGGCCGTGTTTTCCGCCAGCTCGGTCATCGACTCC TCCACGATCATCTCGCGCCTGCCGCCGACGGCGTACCAGGCGCTGCGCGCGGCGTTCAGG AGCGCCATGACCATGTACCGGGCGGCGCCGCCGGTGTCCATCCTCGACACCTGCTACGAC TTCACCGGCGTCCGCAGCATCACCCTGCCCAGCATCGCCCTCGTCTTCGACGGCGGCGCC ACCGTCAACCTCGACGCCGCCGGGATCCTGTTAGGCAGCTGCCTCGCCTTCGCGCCCACA GCCAGCGACCGCATGCCCGGCTTCATCGGCAACGTGCAGCAGAAGACGCTGGAGGTGGTG TACGACGTTCCCGCCAAGGCCATGCGATTCAGGACCGCCGCCTGCTAA

Peptide Sequence

PEP ID	Os06t0119600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:1063563:1066532:-1 gene:Os06g0119600 transcript:Os06t0119600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os06t0119600-01)
Sequence	MIAMTPLGLLLVLLVLCSSILVAHGGDAAAGAYMVIATSTMKPKTFCSGHKVAPGDVPSP NSTWAPLHHLYGPCSPAPSSANSTAADVAASMADMVDDDQRRADYIQKRLTGATDDKQPM AFSSRTSQYEKNGQYATNGGLGSVPHLKSLSTTATTNSAPDGTSAVTQTVIIDSGSDVSW VQCKPCPLPMCHRQRDPLFDPAMSTTYAAVPCTSAACAQLGPYRRGCSANAQCQFGINYG DGSTATGTYSFDDLTLGPYDVIRGFRFGCAHADRGSAFDYDVAGSLALGGGSQSLVQQTA TRYGRVFSYCLPPTASSLGFLVLGVPPERAQLIPSFVSTPLLSSSMAPTFYRVLLRAIIV AGRPLAVPPAVFSASSVIDSSTIISRLPPTAYQALRAAFRSAMTMYRAAPPVSILDTCYD FTGVRSITLPSIALVFDGGATVNLDAAGILLGSCLAFAPTASDRMPGFIGNVQQKTLEVV YDVPAKAMRFRTAAC

Transcript Sequence

Transcript ID	Os06t0119600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1063563:1066532:-1 gene:Os06g0119600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase aspartic, catalytic domain containing protein. (Os06t0119600-01)
Sequence	AAATCGTAGGGTAACCCACAGCTTAGCTAGCAAGCAGCAGCAAGCCAACATAGTAGCTAG CACGTACAAATGATCGCCATGACTCCTCTTGGACTACTGCTAGTGCTTCTCGTCCTCTGT AGCTCCATTCTTGTTGCCCATGGAGGAGACGCTGCAGCCGGCGCCTATATGGTCATAGCA ACCAGCACCATGAAACCGAAAACTTTCTGCTCCGGCCACAAGGTTGCTCCAGGGGACGTG CCGTCGCCGAACAGCACTTGGGCACCGTTGCATCACCTGTATGGGCCATGCTCGCCGGCG CCGTCGTCGGCCAACAGCACCGCCGCCGACGTCGCCGCTTCCATGGCCGACATGGTCGAC GACGACCAACGCCGCGCGGACTACATCCAAAAGAGGCTCACCGGCGCCACCGACGACAAG CAGCCGATGGCCTTTTCGAGCAGAACCTCGCAATACGAGAAGAACGGCCAGTACGCCACT AATGGTGGCTTAGGCAGTGTGCCTCACCTCAAAAGTTTATCAACGACGGCGACGACGAAT TCGGCGCCGGATGGCACGTCGGCGGTGACCCAGACGGTGATAATCGACTCCGGCAGCGAC GTTTCATGGGTGCAATGCAAGCCATGCCCCTTGCCGATGTGCCACCGGCAACGGGACCCC CTGTTCGACCCGGCCATGTCGACCACGTACGCCGCCGTCCCCTGCACCTCCGCCGCCTGC GCGCAGCTCGGCCCCTACCGCCGCGGCTGCTCCGCCAACGCGCAGTGCCAGTTCGGCATC AACTACGGCGACGGGTCGACGGCGACCGGGACGTACAGCTTCGACGACCTCACGCTGGGC CCCTACGACGTCATCAGGGGCTTCCGCTTCGGCTGTGCGCATGCCGATAGGGGGAGTGCG TTCGACTACGACGTCGCCGGGTCACTGGCGCTCGGCGGCGGCTCGCAGTCGCTGGTGCAG CAGACGGCGACGCGGTACGGCAGGGTCTTCTCCTACTGCCTCCCGCCGACGGCGAGCTCC CTCGGCTTCCTCGTTCTCGGCGTGCCGCCGGAACGCGCCCAGCTCATCCCGAGCTTCGTC TCCACGCCACTGCTGAGCAGCAGCATGGCGCCCACGTTCTACAGGGTGCTCCTCCGCGCC ATCATCGTGGCGGGGCGCCCACTCGCCGTGCCACCGGCCGTGTTTTCCGCCAGCTCGGTC ATCGACTCCTCCACGATCATCTCGCGCCTGCCGCCGACGGCGTACCAGGCGCTGCGCGCG GCGTTCAGGAGCGCCATGACCATGTACCGGGCGGCGCCGCCGGTGTCCATCCTCGACACC TGCTACGACTTCACCGGCGTCCGCAGCATCACCCTGCCCAGCATCGCCCTCGTCTTCGAC GGCGGCGCCACCGTCAACCTCGACGCCGCCGGGATCCTGTTAGGCAGCTGCCTCGCCTTC GCGCCCACAGCCAGCGACCGCATGCCCGGCTTCATCGGCAACGTGCAGCAGAAGACGCTG GAGGTGGTGTACGACGTTCCCGCCAAGGCCATGCGATTCAGGACCGCCGCCTGCTAAGTG CTAATTCAAATTTGCTTGCTTGCCAAACTAGCGTATTGTTAGCTTATTATTCGAATATAA GCTAGCTAGTTGATGAAATAATTAGTCAAAGTGATTGTTGTTTATGTTTTGATGCCATGT TTATCCTACATGGCGTACTAGTAGAGCATCTATCTCTATGGAAAGGGATTAAAGTAGCTA GCTTAATTGCAGCATTGTCTGCTAAAGTTTAGGCTAGCTACTAAAGCTCTTTTATTTATC TTGTCTGCAATAATTTGTTATCTTGATGTGATTTCGGTCGTGTGAGATTGTAATATCGAG TTATGCATCTCCATCTTGCATGTC