Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0119100-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:1040027:1042669:1 gene:Os06g0119100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 family protein. (Os06t0119100-01);Hypothetical conserved gene. (Os06t0119100-02)
Sequence	TACTGCAACTCATCCTCAATCGGAACAAGCAGCGTCGCCGGCAACTTCACCTATGCCGAC GCGAGCAGCGAGGGCAGCATGGTGACCGCCTCCGTGCTCATGTTCGTCCTCGCCGGATTC TTCTTCATCCTCAACCTCTTCGGCGGCCTCTCCAACGTGGGCGCCATACTCAGCCCGCGT GTCCGCCTCCTCTTCACCTCCCTGCTCTCCCTCTTCCTCCTCGTCATGTCCTACCTCTTA TCCGAGGCCAAGAACACGGCCAAGGAGCTCGACCAGGTCACCACCGTCATCGGCATCGGC CGCGCATCGTCGACGGACCTCCCGTTCATGGCAGGGGTCATCCTCACCTGGATGCTCCTC GTCGAGCTCATCCGCAAGAAGGTGGACGAGATCGCCATGAAAGGCTACTCGGGCACCATC CACCGTGCCGGCCGTGTCGTCTGGCTCGGCAGCCTCGTCTTCGTCAACATCCGCAGCGCC GGCCGGAAGGCCGTGTTCGGCGTCCTCTGGGTTCTCTGCGCCACCAAGGTGGTGCAACGG ATCGCCTTCACCGAGGTCGGCAAACGCTCCTACGCCTGCGGCAAGAACCCTTGGATTATC ACCTCCTACATGATGTCCACCTCGCCGTCGCTGCCGGCCCAAGGCGACGCCATGCTAAAG GGTTGCAGGTACATCGTGACGGGAGAGGAAGATGCGCGTGTTGAAGCCACCGCCGACGGC TACAAGTTGAAGGAGGACAGCAAGTCGTCCCTCGTCACCGTCGGCAAAATCTGGGTGGAG CAAGGGCTACCTGGAACGGGAAATAATGGTGGCGACGAGAAGGCGGAGCTCAAGAGGCTG TGCCTCTCTTTCGCGCTATCCAAACTGCTGCGACGGAGGCTGGAGCAGCTGCCGGTGCCG GAGCCGGAGATGAGCAGCGCGGAGACCAGCGAGTGCCGCGACGTCATCTTCAACGGCCTC TACAAGAGCGGCGACGCGGTGGCGGTGTTCGAGGTGATGAACAGCGAGATCAACTTCCTG AGCGAGTACTACCACTCCGTCGTCCCCGTCGTCCTGGCCTCCCCATTCTTCTTCGTCGCC AACTACTTCCTCCTCCCCGTCGTCGTCCTGTGCGTCTGCGTCATGACCATCATCCTCTGC GGCGGCGGCGACGTGCTGTACGCGTTCCGGAGCATCAAGACGGACAACTTCACCATCTCC TCGGGCATATTCGACACCACCATGTGCCTCCTCCTGACCGCGCATCACTCGGCCGCCGCC TTCTTCGCCACCATCAACTTCGCCGTCACCTTCCTCCTCTACATCATCTACATCTACGAG GAGGTGTGGGAGTTGTTCGTCTTCCTCCTCTCCAACTGGTTCGCGGTCTCGCTGCTCTCC GCCTACGTCGCCAAGACCCGCTTCTGCGACAACTCCGCCTTCCGTGCTTTCGCCCGCTGC ATCCTCTCCGTCCGGACATGGCTGGGCTTCCATCTCCATCCCCAAGATATGATCAACCAA TTCTCCGCGCTCGACCTCCGTTGGCCGCCGCTCACCCTCGCCATGCCCATCCCTCTCATC ACCTTGCTCGTCTCCACCAAGCCCGTCCCCGTCCCCGTCCCAGTCAAGCACTCCATCCTC CTCAGCTCCCTCGCCTCCGCCTCCGCCTCCGCCTCCACCAAGTCTGCTCTAGCGAGCTTC GACGAGCTCAAGACGGCGTGCGAGAACGGCAGCATCGCGGAGGTGATCCTCATATGCCAC ATCGCCACCGGTCTCCTGGAACGCCTCAATCCTCCGCCTGATCCGGAGGTGATGATCACC GAGTCCGACAGCAAGCGGATGAGCTGCTGCGGCTGTCCGAACAAGAAGAAGAAGAACACT AGTAGTGACAATTTCACCGTCGCGACGACGCTGTCCAGATACTGCGCGTACCTGGTGGCG TTCCAACCGGAGCTCCTTCCGGACTACCATGAGAAGGCGGAGGATCTGTTCAAGGCCATG AAAATGGAGCTCAAAGACAGGCTCGGATGTTACCACTACTACTTCTCGTGCGGCCGTGAG CGAGCCGACGCCATCATCAACAACATCAACAGCAAGAATAACAACAAGGAGGGAACCGTG GACAAGGGCGCAGAGTTGGCCAACAAGTTGCTAGAAAAATACACGAATGATCATGATTCG ATGTGGACGCTTCTGGCGGAGGTGTGGACGGAGATCATCGTGTACGTGGCTCCGTCCAAC GAGGAGCGTACTATCATGGCGCACAAGAATGTGCTATGGCAGGGAGGCGAGTTCATCACC GTGCTTTGGGCTCTCATGACTCACACCGGCATTACCCGACACCGCCGCCTCCGCGAAATC GCTCTCAAAATTTCCCAAGACGACGCCAGCACGTCGTCGTCCCAACAAAAATCCGCACCG GACCGGATCGATAAGCAGCACGAAATCGATATCCATCGTCACTAG

Peptide Sequence

PEP ID	Os06t0119100-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:1040027:1042669:1 gene:Os06g0119100 transcript:Os06t0119100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 family protein. (Os06t0119100-01);Hypothetical conserved gene. (Os06t0119100-02)
Sequence	YCNSSSIGTSSVAGNFTYADASSEGSMVTASVLMFVLAGFFFILNLFGGLSNVGAILSPR VRLLFTSLLSLFLLVMSYLLSEAKNTAKELDQVTTVIGIGRASSTDLPFMAGVILTWMLL VELIRKKVDEIAMKGYSGTIHRAGRVVWLGSLVFVNIRSAGRKAVFGVLWVLCATKVVQR IAFTEVGKRSYACGKNPWIITSYMMSTSPSLPAQGDAMLKGCRYIVTGEEDARVEATADG YKLKEDSKSSLVTVGKIWVEQGLPGTGNNGGDEKAELKRLCLSFALSKLLRRRLEQLPVP EPEMSSAETSECRDVIFNGLYKSGDAVAVFEVMNSEINFLSEYYHSVVPVVLASPFFFVA NYFLLPVVVLCVCVMTIILCGGGDVLYAFRSIKTDNFTISSGIFDTTMCLLLTAHHSAAA FFATINFAVTFLLYIIYIYEEVWELFVFLLSNWFAVSLLSAYVAKTRFCDNSAFRAFARC ILSVRTWLGFHLHPQDMINQFSALDLRWPPLTLAMPIPLITLLVSTKPVPVPVPVKHSIL LSSLASASASASTKSALASFDELKTACENGSIAEVILICHIATGLLERLNPPPDPEVMIT ESDSKRMSCCGCPNKKKKNTSSDNFTVATTLSRYCAYLVAFQPELLPDYHEKAEDLFKAM KMELKDRLGCYHYYFSCGRERADAIINNINSKNNNKEGTVDKGAELANKLLEKYTNDHDS MWTLLAEVWTEIIVYVAPSNEERTIMAHKNVLWQGGEFITVLWALMTHTGITRHRRLREI ALKISQDDASTSSSQQKSAPDRIDKQHEIDIHRH

Transcript Sequence

Transcript ID	Os06t0119100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:1040027:1042669:1 gene:Os06g0119100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF594 family protein. (Os06t0119100-01);Hypothetical conserved gene. (Os06t0119100-02)
Sequence	ATTACTGCAACTCATCCTCAATCGGAACAAGCAGCGTCGCCGGCAACTTCACCTATGCCG ACGCGAGCAGCGAGGGCAGCATGGTGACCGCCTCCGTGCTCATGTTCGTCCTCGCCGGAT TCTTCTTCATCCTCAACCTCTTCGGCGGCCTCTCCAACGTGGGCGCCATACTCAGCCCGC GTGTCCGCCTCCTCTTCACCTCCCTGCTCTCCCTCTTCCTCCTCGTCATGTCCTACCTCT TATCCGAGGCCAAGAACACGGCCAAGGAGCTCGACCAGGTCACCACCGTCATCGGCATCG GCCGCGCATCGTCGACGGACCTCCCGTTCATGGCAGGGGTCATCCTCACCTGGATGCTCC TCGTCGAGCTCATCCGCAAGAAGGTGGACGAGATCGCCATGAAAGGCTACTCGGGCACCA TCCACCGTGCCGGCCGTGTCGTCTGGCTCGGCAGCCTCGTCTTCGTCAACATCCGCAGCG CCGGCCGGAAGGCCGTGTTCGGCGTCCTCTGGGTTCTCTGCGCCACCAAGGTGGTGCAAC GGATCGCCTTCACCGAGGTCGGCAAACGCTCCTACGCCTGCGGCAAGAACCCTTGGATTA TCACCTCCTACATGATGTCCACCTCGCCGTCGCTGCCGGCCCAAGGCGACGCCATGCTAA AGGGTTGCAGGTACATCGTGACGGGAGAGGAAGATGCGCGTGTTGAAGCCACCGCCGACG GCTACAAGTTGAAGGAGGACAGCAAGTCGTCCCTCGTCACCGTCGGCAAAATCTGGGTGG AGCAAGGGCTACCTGGAACGGGAAATAATGGTGGCGACGAGAAGGCGGAGCTCAAGAGGC TGTGCCTCTCTTTCGCGCTATCCAAACTGCTGCGACGGAGGCTGGAGCAGCTGCCGGTGC CGGAGCCGGAGATGAGCAGCGCGGAGACCAGCGAGTGCCGCGACGTCATCTTCAACGGCC TCTACAAGAGCGGCGACGCGGTGGCGGTGTTCGAGGTGATGAACAGCGAGATCAACTTCC TGAGCGAGTACTACCACTCCGTCGTCCCCGTCGTCCTGGCCTCCCCATTCTTCTTCGTCG CCAACTACTTCCTCCTCCCCGTCGTCGTCCTGTGCGTCTGCGTCATGACCATCATCCTCT GCGGCGGCGGCGACGTGCTGTACGCGTTCCGGAGCATCAAGACGGACAACTTCACCATCT CCTCGGGCATATTCGACACCACCATGTGCCTCCTCCTGACCGCGCATCACTCGGCCGCCG CCTTCTTCGCCACCATCAACTTCGCCGTCACCTTCCTCCTCTACATCATCTACATCTACG AGGAGGTGTGGGAGTTGTTCGTCTTCCTCCTCTCCAACTGGTTCGCGGTCTCGCTGCTCT CCGCCTACGTCGCCAAGACCCGCTTCTGCGACAACTCCGCCTTCCGTGCTTTCGCCCGCT GCATCCTCTCCGTCCGGACATGGCTGGGCTTCCATCTCCATCCCCAAGATATGATCAACC AATTCTCCGCGCTCGACCTCCGTTGGCCGCCGCTCACCCTCGCCATGCCCATCCCTCTCA TCACCTTGCTCGTCTCCACCAAGCCCGTCCCCGTCCCCGTCCCAGTCAAGCACTCCATCC TCCTCAGCTCCCTCGCCTCCGCCTCCGCCTCCGCCTCCACCAAGTCTGCTCTAGCGAGCT TCGACGAGCTCAAGACGGCGTGCGAGAACGGCAGCATCGCGGAGGTGATCCTCATATGCC ACATCGCCACCGGTCTCCTGGAACGCCTCAATCCTCCGCCTGATCCGGAGGTGATGATCA CCGAGTCCGACAGCAAGCGGATGAGCTGCTGCGGCTGTCCGAACAAGAAGAAGAAGAACA CTAGTAGTGACAATTTCACCGTCGCGACGACGCTGTCCAGATACTGCGCGTACCTGGTGG CGTTCCAACCGGAGCTCCTTCCGGACTACCATGAGAAGGCGGAGGATCTGTTCAAGGCCA TGAAAATGGAGCTCAAAGACAGGCTCGGATGTTACCACTACTACTTCTCGTGCGGCCGTG AGCGAGCCGACGCCATCATCAACAACATCAACAGCAAGAATAACAACAAGGAGGGAACCG TGGACAAGGGCGCAGAGTTGGCCAACAAGTTGCTAGAAAAATACACGAATGATCATGATT CGATGTGGACGCTTCTGGCGGAGGTGTGGACGGAGATCATCGTGTACGTGGCTCCGTCCA ACGAGGAGCGTACTATCATGGCGCACAAGAATGTGCTATGGCAGGGAGGCGAGTTCATCA CCGTGCTTTGGGCTCTCATGACTCACACCGGCATTACCCGACACCGCCGCCTCCGCGAAA TCGCTCTCAAAATTTCCCAAGACGACGCCAGCACGTCGTCGTCCCAACAAAAATCCGCAC CGGACCGGATCGATAAGCAGCACGAAATCGATATCCATCGTCACTAGCTAATGTGTGTAA ATTTGCTTGCTTGCTTGATCGATTGATTGCTTTTGGATGCGTGAATGTGTGTTTGTTTGG CCTGCAGCTTTCTCTTCTTTAATGTTATTTTCCCCTTCTCTTTCTTTCTTTCTTTTATTC ATTTGTTGTGAAAATGTCTCTACTACTGTAAGTGCATGAGTATGTGTGGTTATAGAGTCT GCT