Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0115800-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:876948:878501:-1 gene:Os06g0115800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0115800-01);Conserved hypothetical protein. (Os06t0115800-02)
Sequence

AACAACAGCGAGAGCGTTGATGCCAAGCCTGAACCTGCTCTGCCGTTTAACCCATTGGCT
GCTAGAGCTGCCACAATAAGTCTATCTGCATTTGGGCCATTCGGCTTTAACTTCTTTAAT
GGCAAGGGCAAAAGGCAGAACAAGAAGCTCAACAATCTAAATCAGTCAAACAAGAAGCCC
AGCAATCCGAATCAGAATTCCATGAAACAGAAAGGAGGTAATTCATCATCGCACGAGGCA
ATGAGCAACGAATGGCTGGAAAATGGGCAGTGCCCACTTGCCCGGTCTTACCGAGCAATG
AGTGGCATTCTGCCCCTTGTTGCCAAGGCTTTACAACCACCAGCCGGTGTGAAGCTGAAG
TGCCCACCTGCTGTGGTCGCTGTGCGTGCAGCCCTTGCACGGACTGAACTTGTGAAGTCT
CTCCGTCCCCAGCCTCTGCCTGCAAAGATGGTAGCCATTGCGTTGCTCGGAATGGCAGCA
AACATCCCTCTTGGGGTGTGGCGTGAGCACACCAAGAAATTCTCCCCTCAGTGGTTTGCA
GCTGTCCATGCCGCTGTTCCATTCATTGGAATGCTGAGGAAATCTGTCAACATGCCCAAG
ACTGCCATGGCATTCACCATAGCAGCCTCCATTGTTGGTCAGACAATCGGGTCGAGGGCG
GAGCGCATTCGTCTGAAGGCACTGGCTGCAAAGAGCGACGCTGATTCCACCACCGTGGCT
GACATGTATCCAAACAAGACTGGAAATTGCAGTGACACCGAGGGCAAGGCATGGGATCCG
CTCGCGATGAAGATGATGGCGGGACGGGCTTCTGGTGGTGCTGCTGCTCCAACACCAAGC
ATGTGTTTCTGA

Peptide Sequence

PEP ID

Os06t0115800-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:876948:878501:-1 gene:Os06g0115800 transcript:Os06t0115800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0115800-01);Conserved hypothetical protein. (Os06t0115800-02)
Sequence

NNSESVDAKPEPALPFNPLAARAATISLSAFGPFGFNFFNGKGKRQNKKLNNLNQSNKKP
SNPNQNSMKQKGGNSSSHEAMSNEWLENGQCPLARSYRAMSGILPLVAKALQPPAGVKLK
CPPAVVAVRAALARTELVKSLRPQPLPAKMVAIALLGMAANIPLGVWREHTKKFSPQWFA
AVHAAVPFIGMLRKSVNMPKTAMAFTIAASIVGQTIGSRAERIRLKALAAKSDADSTTVA
DMYPNKTGNCSDTEGKAWDPLAMKMMAGRASGGAAAPTPSMCF

Transcript Sequence

Transcript ID

Os06t0115800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:876948:878501:-1 gene:Os06g0115800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0115800-01);Conserved hypothetical protein. (Os06t0115800-02)
Sequence

AACAACAGCGAGAGCGTTGATGCCAAGCCTGAACCTGCTCTGCCGTTTAACCCATTGGCT
GCTAGAGCTGCCACAATAAGTCTATCTGCATTTGGGCCATTCGGCTTTAACTTCTTTAAT
GGCAAGGGCAAAAGGCAGAACAAGAAGCTCAACAATCTAAATCAGTCAAACAAGAAGCCC
AGCAATCCGAATCAGAATTCCATGAAACAGAAAGGAGGTAATTCATCATCGCACGAGGCA
ATGAGCAACGAATGGCTGGAAAATGGGCAGTGCCCACTTGCCCGGTCTTACCGAGCAATG
AGTGGCATTCTGCCCCTTGTTGCCAAGGCTTTACAACCACCAGCCGGTGTGAAGCTGAAG
TGCCCACCTGCTGTGGTCGCTGTGCGTGCAGCCCTTGCACGGACTGAACTTGTGAAGTCT
CTCCGTCCCCAGCCTCTGCCTGCAAAGATGGTAGCCATTGCGTTGCTCGGAATGGCAGCA
AACATCCCTCTTGGGGTGTGGCGTGAGCACACCAAGAAATTCTCCCCTCAGTGGTTTGCA
GCTGTCCATGCCGCTGTTCCATTCATTGGAATGCTGAGGAAATCTGTCAACATGCCCAAG
ACTGCCATGGCATTCACCATAGCAGCCTCCATTGTTGGTCAGACAATCGGGTCGAGGGCG
GAGCGCATTCGTCTGAAGGCACTGGCTGCAAAGAGCGACGCTGATTCCACCACCGTGGCT
GACATGTATCCAAACAAGACTGGAAATTGCAGTGACACCGAGGGCAAGGCATGGGATCCG
CTCGCGATGAAGATGATGGCGGGACGGGCTTCTGGTGGTGCTGCTGCTCCAACACCAAGC
ATGTGTTTCTGATTGCTCACTGATTGGAAAATTTGTATCTACCAGTATCCCTGGAGAGTG
GAGAGTTGATATTGAGTCTATTTTATCTTGTGATGTAATTGCCTTTGCTTGTCCCTCAGA
AGTATTCGTTTGTTTGTGGGGTGAGACAAGTGGAATAAGAGTGCTACTATATACACGATC
ATTCTGTTGTTAAGTTTGCCAGTTCTGCAGTTCATGTATCTGTAATTTGATGATGCTGGA
TTTCTACTATTTATCAATCGTCATTATACTGTGTGT