Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0115700-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:875413:876367:-1 gene:Os06g0115700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0115700-01);Hypothetical conserved gene. (Os06t0115700-02)
Sequence

ATGGTGGTGGCACTGGGTCCCGGCCGGTTCTACGGCAGCAGCCTCCCACGGCCGCGCTTC
TTCTCCGGCGGCGACCGCGTCGAGCCGCCGGTGGCCGTCACCGACCCGCTCATGGCGTGG
GCGCACGAGGCGCACTGGTCCATGGGCGGCCTCAGCTCCAAGCGCCTCCGCCTGCAGGGC
CGCATCGAGGGCTCCATCGACAAGCTCCGCCGCCGCGCCCGCCGCGACGCCAGGAAGGCG
GCCAAGGCCCGCGCCGCCGGCATCAAGCCCCGCTCGCTCGCCGCCCTCGGCTCCGACGAC
GACGACTCCTCCTCCGACGAGGAAGAGGAGGTCGAGGCCCAGAAGCAGCAGATCGTCGAC
GAGCCGTCGGAGTCGGAGGAGGAGCAGGAGGAGGAGAACGAGGAAGAGGAAGAGGAGGAA
GCCCTCGCCACCCTCGCCGCCGCGGCCAAGAGGAAGCGGGCGAGGAAGCTCAGCGACGAG
TTCGACCGCGTCGCGACCATGCAGGAGGGGGAGGCCAAGAAGCAGAAGCCCGCAGCAACC
TCTACACCGGCGAGGACTTCACCGAGGAGGAAGGCCGCCGAGGTGGCTCTCACCCCGGCG
CCGGCGAGGGCGTCACCGAGGGGGAAGGCTGCTGCCGAGGGGGCTACTGCTGCACCGGCG
AGGGCGTCGCCGAGGAGGAAGGCCGCGGCAAGGAGGACATCGCCGAGGATGAAGCACTGA

Peptide Sequence

PEP ID

Os06t0115700-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:875413:876367:-1 gene:Os06g0115700 transcript:Os06t0115700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0115700-01);Hypothetical conserved gene. (Os06t0115700-02)
Sequence

MVVALGPGRFYGSSLPRPRFFSGGDRVEPPVAVTDPLMAWAHEAHWSMGGLSSKRLRLQG
RIEGSIDKLRRRARRDARKAAKARAAGIKPRSLAALGSDDDDSSSDEEEEVEAQKQQIVD
EPSESEEEQEEENEEEEEEEALATLAAAAKRKRARKLSDEFDRVATMQEGEAKKQKPAAT
STPARTSPRRKAAEVALTPAPARASPRGKAAAEGATAAPARASPRRKAAARRTSPRMKH

Transcript Sequence

Transcript ID

Os06t0115700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:875413:876367:-1 gene:Os06g0115700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0115700-01);Hypothetical conserved gene. (Os06t0115700-02)
Sequence

TCCCAATTCCCATCTGCTCCTCCAACTCCAATCCAATCGAGAGGTCGATCTCTGAATCTG
ATCTGATCACCATGGTGGTGGCACTGGGTCCCGGCCGGTTCTACGGCAGCAGCCTCCCAC
GGCCGCGCTTCTTCTCCGGCGGCGACCGCGTCGAGCCGCCGGTGGCCGTCACCGACCCGC
TCATGGCGTGGGCGCACGAGGCGCACTGGTCCATGGGCGGCCTCAGCTCCAAGCGCCTCC
GCCTGCAGGGCCGCATCGAGGGCTCCATCGACAAGCTCCGCCGCCGCGCCCGCCGCGACG
CCAGGAAGGCGGCCAAGGCCCGCGCCGCCGGCATCAAGCCCCGCTCGCTCGCCGCCCTCG
GCTCCGACGACGACGACTCCTCCTCCGACGAGGAAGAGGAGGTCGAGGCCCAGAAGCAGC
AGATCGTCGACGAGCCGTCGGAGTCGGAGGAGGAGCAGGAGGAGGAGAACGAGGAAGAGG
AAGAGGAGGAAGCCCTCGCCACCCTCGCCGCCGCGGCCAAGAGGAAGCGGGCGAGGAAGC
TCAGCGACGAGTTCGACCGCGTCGCGACCATGCAGGAGGGGGAGGCCAAGAAGCAGAAGC
CCGCAGCAACCTCTACACCGGCGAGGACTTCACCGAGGAGGAAGGCCGCCGAGGTGGCTC
TCACCCCGGCGCCGGCGAGGGCGTCACCGAGGGGGAAGGCTGCTGCCGAGGGGGCTACTG
CTGCACCGGCGAGGGCGTCGCCGAGGAGGAAGGCCGCGGCAAGGAGGACATCGCCGAGGA
TGAAGCACTGAGAGAGGTGGCCTGCTTAATGTGAAATCCTAGTTCTTGCTCTGTTACATT
GGTCGCTCTAGAGAATCGAGATGTGATTGATGGATATGTAATGTGTTATGTGTGTGTGCT
AAGTATTTAGTGATGAAACCATTGAAATGTGATGCTAATCTCTGAATTAGTCATG