Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0115400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:864346:866968:-1 gene:Os06g0115400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment). (Os06t0115400-01);Similar to Superoxide dismutase. (Os06t0115400-02)
Sequence	ATGGCGTTCGCCACACTGGTGGGAGTGGGAGGCCTATCGCCTGCCCTCTTCTCCCCCTCC CGCCCCCTCTCCTGCTCCAGCTCCACCTCCGTCTCGGCCCCGTTCATCCTCCGCGCCGGC GGCGGCGGCGACGCCCGGCGGCATGGCCTCCGACGCCTCGTCACCCCACTGAGAGGGAGC GCCTGCAGGGGAGAGAGTACGAACTCACGTGTACTCCAGTGTGCCAATGAGGCTAATGTG GTGACCGAGGATGACATTGTGAACGATGGTATCGATGATGAAACCGCTTCCGATGCTGAA ATGGATGAGGATGCTGAAGCAAATGGTGATGAGTCGTCAGGCACTGATGAAGATGCTTCT GTCTCCTGGATAGAGCAGCAGCCTCTTCCTTATCCTTCAGATGCCCTAGAGCCATACATC AGCAAGGAGACGGTGGAACAGCACTGGGGAGTTCATCAGAACATTCACGTCGAGAGGCTC AATGGCATGATTGGTGGCAGTGAGTGGGAGGGGATGTCGCTGGGGCAGATGATGCTATCC TCCTTCAATGAGGGCAGGGAGGCACCCCATCCCCCCTTCTTCCATGCTGCACAGATATGG AACCATGATTTCTATTGGCGATCTATGCAACCTGGTGGCGGGGGAAAACCCCCAGAACGC CTTTTGAAATTTATCAACAGGGACTTTGGATCCTATGATGGCATGATTCGACAATTTATG GATGCTGCATCAACTCAATTTGGTTCTGGATGGGTTTGGCTTTGTTACAAAACAAGCAAG TTGCCTCATGTGAAATCAAGAAGCCCAATCCCATCTGATAATTATGGTAGACTGGTCATC TCAAAGTCTCCGAATGCCATCAATCCTCTTGTCTGGGGTCACTCTCCACTCCTTGCAATT GATCTTTGGGAGCATGCATACTACCTGGATTATGAGGATCGGAGATCTGACTATGTCTCC ACATTTCTAGAGAAGCTTGTGTCATGGGAAACTGTTGAGTCCAGGCTTAAGAAGGCCGTA CAACGGGCAGTAGAAAGAGATGAATATGTTAGCACAAAGCATATAAGGAAGCAACTTTTA GCTCGGGCAAAGAGCCAAATCAGAGCTATGCCTCAGCAGGTCAATGGGGATGCAAGAGAG CAGACCAGCGGTCAAGAGAAGTCCCTAGGGGTGTGA

Peptide Sequence

PEP ID	Os06t0115400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:864346:866968:-1 gene:Os06g0115400 transcript:Os06t0115400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment). (Os06t0115400-01);Similar to Superoxide dismutase. (Os06t0115400-02)
Sequence	MAFATLVGVGGLSPALFSPSRPLSCSSSTSVSAPFILRAGGGGDARRHGLRRLVTPLRGS ACRGESTNSRVLQCANEANVVTEDDIVNDGIDDETASDAEMDEDAEANGDESSGTDEDAS VSWIEQQPLPYPSDALEPYISKETVEQHWGVHQNIHVERLNGMIGGSEWEGMSLGQMMLS SFNEGREAPHPPFFHAAQIWNHDFYWRSMQPGGGGKPPERLLKFINRDFGSYDGMIRQFM DAASTQFGSGWVWLCYKTSKLPHVKSRSPIPSDNYGRLVISKSPNAINPLVWGHSPLLAI DLWEHAYYLDYEDRRSDYVSTFLEKLVSWETVESRLKKAVQRAVERDEYVSTKHIRKQLL ARAKSQIRAMPQQVNGDAREQTSGQEKSLGV

Transcript Sequence

Transcript ID	Os06t0115400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:864346:866968:-1 gene:Os06g0115400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Superoxide dismutase [Fe], chloroplast (EC 1.15.1.1) (Fragment). (Os06t0115400-01);Similar to Superoxide dismutase. (Os06t0115400-02)
Sequence	AATCTTATCGTCTCCTCGAAGCTTTCTCCCAAACTGCTCGTCCATGGCGTTCGCCACACT GGTGGGAGTGGGAGGCCTATCGCCTGCCCTCTTCTCCCCCTCCCGCCCCCTCTCCTGCTC CAGCTCCACCTCCGTCTCGGCCCCGTTCATCCTCCGCGCCGGCGGCGGCGGCGACGCCCG GCGGCATGGCCTCCGACGCCTCGTCACCCCACTGAGAGGGAGCGCCTGCAGGGGAGAGAG TACGAACTCACGTGTACTCCAGTGTGCCAATGAGGCTAATGTGGTGACCGAGGATGACAT TGTGAACGATGGTATCGATGATGAAACCGCTTCCGATGCTGAAATGGATGAGGATGCTGA AGCAAATGGTGATGAGTCGTCAGGCACTGATGAAGATGCTTCTGTCTCCTGGATAGAGCA GCAGCCTCTTCCTTATCCTTCAGATGCCCTAGAGCCATACATCAGCAAGGAGACGGTGGA ACAGCACTGGGGAGTTCATCAGAACATTCACGTCGAGAGGCTCAATGGCATGATTGGTGG CAGTGAGTGGGAGGGGATGTCGCTGGGGCAGATGATGCTATCCTCCTTCAATGAGGGCAG GGAGGCACCCCATCCCCCCTTCTTCCATGCTGCACAGATATGGAACCATGATTTCTATTG GCGATCTATGCAACCTGGTGGCGGGGGAAAACCCCCAGAACGCCTTTTGAAATTTATCAA CAGGGACTTTGGATCCTATGATGGCATGATTCGACAATTTATGGATGCTGCATCAACTCA ATTTGGTTCTGGATGGGTTTGGCTTTGTTACAAAACAAGCAAGTTGCCTCATGTGAAATC AAGAAGCCCAATCCCATCTGATAATTATGGTAGACTGGTCATCTCAAAGTCTCCGAATGC CATCAATCCTCTTGTCTGGGGTCACTCTCCACTCCTTGCAATTGATCTTTGGGAGCATGC ATACTACCTGGATTATGAGGATCGGAGATCTGACTATGTCTCCACATTTCTAGAGAAGCT TGTGTCATGGGAAACTGTTGAGTCCAGGCTTAAGAAGGCCGTACAACGGGCAGTAGAAAG AGATGAATATGTTAGCACAAAGCATATAAGGAAGCAACTTTTAGCTCGGGCAAAGAGCCA AATCAGAGCTATGCCTCAGCAGGTCAATGGGGATGCAAGAGAGCAGACCAGCGGTCAAGA GAAGTCCCTAGGGGTGTGACAACGGAGCCAAGTAAGCTACGGCAGGTGGGTCATGTTGCC GAGTTGAACCATGGGGATGATGGACTTGTAACACAGGAAGCTAGAGCAGCTGATCAATCT TCAAGGTAGCAGTATCCGAAGATTGTATGCACATACTGTGGGCAACCCTTTGCTTAATAG CAAATGTTGTCGTACAGGCAGCTTCACAGTTTCTGTCGCTGTCGATGAATAGATCTGTAG TTCGTGACACTGCAGCAAATACAAGTCACAAACCCAGAGTCATGTGCGAGCTAAATTTTG ATAGGAGTAATTAGGTTTGAGTATCATAGAGATAGACAAGAATTAGTCACTTGGAGCAAA TGAGCCTGACATCTTGTATTCCTGTGCTGTCCATGTTTGAATCCTGAACTTCTGATTGAC AAACCAAAGAAAATTGTAGTTCCGAAGAAATACATCACTGGTGTCAGTAATGTTTGTT