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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0114700-03
CDS Infomation

cds chromosome:IRGSP-1.0:6:841360:844162:-1 gene:Os06g0114700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os06t0114700-01);Protein of unknown function DUF1218 family protein. (Os06t0114700-02);Protein of unknown function DUF1218 family protein. (Os06t0114700-03)
Sequence

ATGGAGAGGAAGGTGGTGGTGGTGTGCGCGGTGGTCGGCTTCCTCGGCGTCCTCTCGGCG
GCGCTCGGCTTCGCGGCGGAGGGCACACGCGTCAAGGTTTCAGATGTGCAAACTTCTTCT
CCAGGTCAATGCATATACCCAAGAAGCCCAGCCTTAGCCCTAGGGTTAATATCTGCGGTT
GCTCTTATGGTCGCCCAGTCTATTATAAATACAGTGGCTGGTTGCATCTGTTGTAAGAGG
CATCCAGTTCCCTCAGACACTAACTGGAGCGTAGCTCTGATCTCATTCATCGTGTCTTGG
GCCACTTTCATAATCGCGTTCCTTCTCCTACTGACCGGAGCTGCACTTAACGATCAACGG
GGTGAGGAGAACATGTACTTTGGCAGCTTCTGCTACGTTGTCAAGCCAGGGGTCTTTTCT
GGAGGGGCAGTGCTCTCACTTGCCAGCGTGGCACTGGCAATAGTTTACTACGTTGCCCTA
TCATCGGCGAAAAGTCCACCAAATTGGGGTCCCCAGCAGAACCAAGGCATCGCCATGGGC
CAACCTGTGATCCCTCCACAGAGCAGCGAACCGGTGTTTGTCCACGAGGACACCTACAAT
CGGCAGCAATTCCCATAA

Peptide Sequence

PEP ID

Os06t0114700-03
PEP Infomation

pep chromosome:IRGSP-1.0:6:841360:844162:-1 gene:Os06g0114700 transcript:Os06t0114700-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os06t0114700-01);Protein of unknown function DUF1218 family protein. (Os06t0114700-02);Protein of unknown function DUF1218 family protein. (Os06t0114700-03)
Sequence

MERKVVVVCAVVGFLGVLSAALGFAAEGTRVKVSDVQTSSPGQCIYPRSPALALGLISAV
ALMVAQSIINTVAGCICCKRHPVPSDTNWSVALISFIVSWATFIIAFLLLLTGAALNDQR
GEENMYFGSFCYVVKPGVFSGGAVLSLASVALAIVYYVALSSAKSPPNWGPQQNQGIAMG
QPVIPPQSSEPVFVHEDTYNRQQFP

Transcript Sequence

Transcript ID

Os06t0114700-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:841360:844162:-1 gene:Os06g0114700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1218 family protein. (Os06t0114700-01);Protein of unknown function DUF1218 family protein. (Os06t0114700-02);Protein of unknown function DUF1218 family protein. (Os06t0114700-03)
Sequence

GTTGGAGTGAGTATTCATCGAGGCAAAGCTCGAATTTTTGGTACTATCCGATTGGTGGCG
AAGCAGCGGCGGAGCGAGAGAAAATCGCTGTAGGAATCGGGGGAGAAGGAGGAGTAGATA
GAGGGAGGTGGATTGAGCTGTGGGAGGTTAGGTTGGTGATTGGTAGAGGAGGAGGAGGAG
GAGATGGAGAGGAAGGTGGTGGTGGTGTGCGCGGTGGTCGGCTTCCTCGGCGTCCTCTCG
GCGGCGCTCGGCTTCGCGGCGGAGGGCACACGCGTCAAGGTTTCAGATGTGCAAACTTCT
TCTCCAGGTCAATGCATATACCCAAGAAGCCCAGCCTTAGCCCTAGGGTTAATATCTGCG
GTTGCTCTTATGGTCGCCCAGTCTATTATAAATACAGTGGCTGGTTGCATCTGTTGTAAG
AGGCATCCAGTTCCCTCAGACACTAACTGGAGCGTAGCTCTGATCTCATTCATCGTGTCT
TGGGCCACTTTCATAATCGCGTTCCTTCTCCTACTGACCGGAGCTGCACTTAACGATCAA
CGGGGTGAGGAGAACATGTACTTTGGCAGCTTCTGCTACGTTGTCAAGCCAGGGGTCTTT
TCTGGAGGGGCAGTGCTCTCACTTGCCAGCGTGGCACTGGCAATAGTTTACTACGTTGCC
CTATCATCGGCGAAAAGTCCACCAAATTGGGGTCCCCAGCAGAACCAAGGCATCGCCATG
GGCCAACCTGTGATCCCTCCACAGAGCAGCGAACCGGTGTTTGTCCACGAGGACACCTAC
AATCGGCAGCAATTCCCATAAATCATGATCTGTGCAAGCTGTTTCGAGGGCCATTCTGAT
ACATTATGTTTGGTTTGTATAGGCCTCCAGGTTAGAACAGTAGCAGTAACAATTGTTGTT
AGGTAGAGTCATGTTTTTTGCTTTCTTCTTCCCCCTCTTTCTTGAGCGCTACTGTCGCAC
GTTCTGCTTCATCACAGCGGATATTCGATTTTACATGAACCGGGCAATGTTGAAGAAAGC
TTGAGTTTCTTGCT