Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0114600-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:835629:838873:1 gene:Os06g0114600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0114600-01)
Sequence

ATGGCCGCCGGAGCGCCGCCGCTCGCCGGCGTCGGAGACCGGGGCTCGTCCTCCTCCTCC
TCGCACCCGCCTCCGCCTCCCCCTCCCAAGATCCTTCTCGCCAAGCCCCCGCTTCCGCCC
CCCTCGTCCTCCGGCGCCGACGACGACGGCGGCGGCGGAGGAGGCGCGGGCCGCTCGCGG
CAGGCCACGCAGCCTGGCTCGCTCAGCCTCGTCTCCGACGCGTGGGAGGTCCACACCGAC
AAGATCCTCCCGTATTTGACTGAGAACAATGATTTCATGGTGATTGGAGTAATTGGTCCA
ACTGGTGTGGGCAAGTCAACCATCATGAACGAGCTTTATGGATATGATGGAAGCTCACCT
GGAATGCTTCCTCCTTTTGCTACACAAACTGAGGAAATCAAAGCAATGGCTAAGCACTGT
ACTGCTGGCATTGATATCAGGATCTCTAATGAACGGGTTATACTTCTAGACACTCAGCCA
GTATTCAGTCCCTCCGTACTAATTGATATGATGAAGCCAGATGGTTCATCCGCAATTCCT
ATCCTCAGTGGTGATCCATTATCAGCAGACCTGGCTCATGAGTTAATGGGAATCCAGCTT
GGTGTTTTCTTGGCATCTGTTTGCAATATTTTGTTGGTTGTATCGGAGGGGATTAATGAC
CTGTCCATGTGGGACCTCATTCTTACGGTTGATTTACTGAAGCACAACATACCTGATCCA
TCATTATTGACCTCCTCAACTACCCAAGACAAGGAAAACAAAAATGATAACCAATCAGGC
ATTGAAGATTACATAGCTGATCTCTGTTTTGTGCATGCTAGATTGCGGGAACAAGACTTT
TCTCCTTCAAAGCTCATGGTTCTGAAGAGGGTTCTTGAAAAACACTTCAAGTCCTCCTCC
TTTAGCATTGGAAGCTCTGGAGCAACACCTCAAGTTTCTGACTCCTCAGTTCCTTCAAGC
ATGAAGATTGAGGATCTGAGCTCCAATCAGCAGGACATATATCTTCTTCCATTAAGAACA
CCTGATAACTCAACAAATTTTGAGTATCGGACATGTCCATCCATGTTAGGGATGCTTCGT
GATCAGATCTTATCAAGGCCATCGAGGTCATTCTCGAAGAATCTCACCGAGCGTGACTGG
TTGAGGAGCTCAGCGAAGATCTGGGACATGGTGAAGAAATCTCCTGTCATCTTAGAATAT
TGCAAAACACTTCAGGATTCAGGGTTTTTCAGAAAGTAG

Peptide Sequence

PEP ID

Os06t0114600-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:835629:838873:1 gene:Os06g0114600 transcript:Os06t0114600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0114600-01)
Sequence

MAAGAPPLAGVGDRGSSSSSSHPPPPPPPKILLAKPPLPPPSSSGADDDGGGGGGAGRSR
QATQPGSLSLVSDAWEVHTDKILPYLTENNDFMVIGVIGPTGVGKSTIMNELYGYDGSSP
GMLPPFATQTEEIKAMAKHCTAGIDIRISNERVILLDTQPVFSPSVLIDMMKPDGSSAIP
ILSGDPLSADLAHELMGIQLGVFLASVCNILLVVSEGINDLSMWDLILTVDLLKHNIPDP
SLLTSSTTQDKENKNDNQSGIEDYIADLCFVHARLREQDFSPSKLMVLKRVLEKHFKSSS
FSIGSSGATPQVSDSSVPSSMKIEDLSSNQQDIYLLPLRTPDNSTNFEYRTCPSMLGMLR
DQILSRPSRSFSKNLTERDWLRSSAKIWDMVKKSPVILEYCKTLQDSGFFRK

Transcript Sequence

Transcript ID

Os06t0114600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:835629:838873:1 gene:Os06g0114600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os06t0114600-01)
Sequence

GCCCACAGCAGCAGCAGCACGCCGCGCGCGATGGCCGCCGGAGCGCCGCCGCTCGCCGGC
GTCGGAGACCGGGGCTCGTCCTCCTCCTCCTCGCACCCGCCTCCGCCTCCCCCTCCCAAG
ATCCTTCTCGCCAAGCCCCCGCTTCCGCCCCCCTCGTCCTCCGGCGCCGACGACGACGGC
GGCGGCGGAGGAGGCGCGGGCCGCTCGCGGCAGGCCACGCAGCCTGGCTCGCTCAGCCTC
GTCTCCGACGCGTGGGAGGTCCACACCGACAAGATCCTCCCGTATTTGACTGAGAACAAT
GATTTCATGGTGATTGGAGTAATTGGTCCAACTGGTGTGGGCAAGTCAACCATCATGAAC
GAGCTTTATGGATATGATGGAAGCTCACCTGGAATGCTTCCTCCTTTTGCTACACAAACT
GAGGAAATCAAAGCAATGGCTAAGCACTGTACTGCTGGCATTGATATCAGGATCTCTAAT
GAACGGGTTATACTTCTAGACACTCAGCCAGTATTCAGTCCCTCCGTACTAATTGATATG
ATGAAGCCAGATGGTTCATCCGCAATTCCTATCCTCAGTGGTGATCCATTATCAGCAGAC
CTGGCTCATGAGTTAATGGGAATCCAGCTTGGTGTTTTCTTGGCATCTGTTTGCAATATT
TTGTTGGTTGTATCGGAGGGGATTAATGACCTGTCCATGTGGGACCTCATTCTTACGGTT
GATTTACTGAAGCACAACATACCTGATCCATCATTATTGACCTCCTCAACTACCCAAGAC
AAGGAAAACAAAAATGATAACCAATCAGGCATTGAAGATTACATAGCTGATCTCTGTTTT
GTGCATGCTAGATTGCGGGAACAAGACTTTTCTCCTTCAAAGCTCATGGTTCTGAAGAGG
GTTCTTGAAAAACACTTCAAGTCCTCCTCCTTTAGCATTGGAAGCTCTGGAGCAACACCT
CAAGTTTCTGACTCCTCAGTTCCTTCAAGCATGAAGATTGAGGATCTGAGCTCCAATCAG
CAGGACATATATCTTCTTCCATTAAGAACACCTGATAACTCAACAAATTTTGAGTATCGG
ACATGTCCATCCATGTTAGGGATGCTTCGTGATCAGATCTTATCAAGGCCATCGAGGTCA
TTCTCGAAGAATCTCACCGAGCGTGACTGGTTGAGGAGCTCAGCGAAGATCTGGGACATG
GTGAAGAAATCTCCTGTCATCTTAGAATATTGCAAAACACTTCAGGATTCAGGGTTTTTC
AGAAAGTAGCCATAGTTACCTAGCTGTTTGCATGTTCTTACGTGACTACATTACTAGATC
AGATGAATTTGGTACTGTATGTGATTATGTATATCTCGGATTCTGTTTTTGCCCCC