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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0114200-00
CDS Infomation

cds chromosome:IRGSP-1.0:6:819373:820356:1 gene:Os06g0114200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-RIBOSYLATION FACTOR B1A description:Similar to ATARFB1B; GTP binding. (Os06t0114200-00)
Sequence

ATGGGGCAGTCCCTGAGGAAGCTGTTCGACAGCTTCTGCACAAAGGAGATGAAGGTTCTG
ATGCTTGGGCTGGATGCTGCTGGGAAGACGACGATTCTGTACAGGCTGCACATTGGCGAA
GTTCTGTCCTCCATACCCACAATCGGGTTCAACGTGGAGAAGGTGGAGTACAAGAACGTG
GCCTTCACGGTGTGGGACGTGGGAGGCCAGGACAAGCTCCGACCTCTCTGGAGACAATAC
TTCAGAAACGCCGACGCCCTGATCTACGTGGTTGATTCGATGGACAGGGAAAGGATAGGA
GTAGCCAAGGAGGAGTTCCAGGCCATCATCCGCGACCCCCTCATGCTCAACAGCGTCATC
CTCCTCCTCGCCAACAAGCAGGACCTGAAAGGGGCGATGAGCTCGTCGGAGGTGTGCCAG
CGGCTGGGGGCGTACGAGGAGCTCAAGAACCGGAGGTGGCACTGTCAGGGAGCCTCAGCG
CTCACCGGCGACGGCCTCCACGGCGGCCTCGACTGGCTGGCCTCCACCCTCCGCGACGTC
CAGACGTGGGGCACCTCCGTCCGCTTCTAG

Peptide Sequence

PEP ID

Os06t0114200-00
PEP Infomation

pep chromosome:IRGSP-1.0:6:819373:820356:1 gene:Os06g0114200 transcript:Os06t0114200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-RIBOSYLATION FACTOR B1A description:Similar to ATARFB1B; GTP binding. (Os06t0114200-00)
Sequence

MGQSLRKLFDSFCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNV
AFTVWDVGGQDKLRPLWRQYFRNADALIYVVDSMDRERIGVAKEEFQAIIRDPLMLNSVI
LLLANKQDLKGAMSSSEVCQRLGAYEELKNRRWHCQGASALTGDGLHGGLDWLASTLRDV
QTWGTSVRF

Transcript Sequence

Transcript ID

Os06t0114200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:819373:820356:1 gene:Os06g0114200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADP-RIBOSYLATION FACTOR B1A description:Similar to ATARFB1B; GTP binding. (Os06t0114200-00)
Sequence

ATGGGGCAGTCCCTGAGGAAGCTGTTCGACAGCTTCTGCACAAAGGAGATGAAGGTTCTG
ATGCTTGGGCTGGATGCTGCTGGGAAGACGACGATTCTGTACAGGCTGCACATTGGCGAA
GTTCTGTCCTCCATACCCACAATCGGGTTCAACGTGGAGAAGGTGGAGTACAAGAACGTG
GCCTTCACGGTGTGGGACGTGGGAGGCCAGGACAAGCTCCGACCTCTCTGGAGACAATAC
TTCAGAAACGCCGACGCCCTGATCTACGTGGTTGATTCGATGGACAGGGAAAGGATAGGA
GTAGCCAAGGAGGAGTTCCAGGCCATCATCCGCGACCCCCTCATGCTCAACAGCGTCATC
CTCCTCCTCGCCAACAAGCAGGACCTGAAAGGGGCGATGAGCTCGTCGGAGGTGTGCCAG
CGGCTGGGGGCGTACGAGGAGCTCAAGAACCGGAGGTGGCACTGTCAGGGAGCCTCAGCG
CTCACCGGCGACGGCCTCCACGGCGGCCTCGACTGGCTGGCCTCCACCCTCCGCGACGTC
CAGACGTGGGGCACCTCCGTCCGCTTCTAG