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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0112400-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:699114:702164:1 gene:Os06g0112400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase domain containing protein. (Os06t0112400-01)
Sequence

ATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTGTG
CAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAAGT
GGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAACT
GCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTCCA
GAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCCCT
GTCAGTGAAGACAACAATGTTGTCCATAAGGCTGAGGATGTTGTCAGCACCATGCTTGCT
AAGGGGTTCACCCTGGGGAAAGATGCCGTTGGCAAGGCAAAAGCTTTTGATGAGAAGCAT
GGGTTCACATCCACTGCTGGCGCCAAGGTGGCCTCCATTGACAGGAAGATTGGTCTTAGC
GAGAAGTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGAAG
TTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCACT
GCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCAAC
GCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGATG
GCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCATC
CAGTGA

Peptide Sequence

PEP ID

Os06t0112400-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:699114:702164:1 gene:Os06g0112400 transcript:Os06t0112400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase domain containing protein. (Os06t0112400-01)
Sequence

MDVKPVRTVKVTNVSLSATVQDIKEFFSFSGDIEHVEMQSGDEWSQVAYVTFKDPQGAET
ALLLSGATIVDLSVIIAPAPEYQPPPTSSAPPMYSATSVPVSEDNNVVHKAEDVVSTMLA
KGFTLGKDAVGKAKAFDEKHGFTSTAGAKVASIDRKIGLSEKFTIGTSIVNEKVKEMDQK
FQVSDKTKSAFAAAEQKVSTAGSAIMKNRYVFTGASWVTNAFNKVAKAATDVGTMTKEKM
AAEDQHKGSGPSGGHSYTPIQ

Transcript Sequence

Transcript ID

Os06t0112400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:699114:702164:1 gene:Os06g0112400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase domain containing protein. (Os06t0112400-01)
Sequence

CTCCGCAGTTCGCCGCTGCTTCCACTCCGCCTCCACCTCCGCCGCCGCCGCTGCTCCTCC
TCCTCGCGCTTACAGTTTCCTCTACTTCCCCCTCCTTGGTCTTGGTCTGCCTCCTCCTCG
CCATGGACGTCAAGCCGGTGAGGACTGTGAAGGTCACCAATGTCTCCCTGAGTGCAACTG
TGCAAGACATTAAGGAGTTCTTTTCATTTTCAGGAGACATTGAACATGTGGAGATGCAAA
GTGGCGATGAGTGGTCTCAAGTTGCATATGTGACTTTCAAAGATCCCCAAGGAGCAGAAA
CTGCACTTCTTCTTTCAGGCGCAACGATAGTTGATCTTTCTGTCATCATCGCACCTGCTC
CAGAATATCAACCACCCCCTACTTCATCTGCTCCTCCAATGTATAGTGCAACCAGTGTCC
CTGTCAGTGAAGACAACAATGTTGTCCATAAGGCTGAGGATGTTGTCAGCACCATGCTTG
CTAAGGGGTTCACCCTGGGGAAAGATGCCGTTGGCAAGGCAAAAGCTTTTGATGAGAAGC
ATGGGTTCACATCCACTGCTGGCGCCAAGGTGGCCTCCATTGACAGGAAGATTGGTCTTA
GCGAGAAGTTCACTATTGGTACTTCCATAGTGAACGAGAAGGTCAAGGAGATGGATCAGA
AGTTCCAGGTGTCGGACAAGACCAAGTCTGCATTCGCTGCTGCTGAACAGAAGGTGAGCA
CTGCTGGATCTGCTATCATGAAGAATAGGTATGTCTTCACCGGGGCTTCGTGGGTCACCA
ACGCATTCAACAAAGTTGCCAAGGCTGCCACTGATGTTGGTACAATGACAAAGGAGAAGA
TGGCAGCTGAAGACCAGCATAAGGGCTCGGGTCCTTCTGGAGGGCACTCGTACACACCCA
TCCAGTGATGACTCCACGCTCTCTCATGTGCCGCATTGTGTTGTATTGATGGATGTAAAA
CATAGATATAGAACAGAAAAAGTCCCCTCCTGGCATACCACATACTTCTATCAGTGAACT
TTTCGCATTGCAGGAATTTTGTTTCCAGTAGAATAGGAAATATGATGGTGATCACAATGT
ATTCCGCTGGTTTATAAGGCGTATGTTCAAACTGTTTCTGGTTGTAGTAACTTGCATGAA
CCTTGGC