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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0112300-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:696034:698216:1 gene:Os06g0112300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os06t0112300-01)
Sequence

ATGGAGCTGGACACTGATCCTACCAAGCTGAAGGCCAAGCCCATCATCAAACCAAAAGTA
GAACCCTGCGACGACGATGACGAGTTGCCGCCGCCGCCGCCGCCGGCTTCAGGATCCGGC
GAGGATTGGGAGGCCACCACCCCTCTCGCCGCCGGCAACCCCTTCTTCACCGCCCTCATC
GCCAAGTCTCATCTCCACCCCAAGTTCCAGATGTGGATTCCACCTCGGTTCCAGCATCGG
CTGGCGGAGCCGGAGGCGCGCACGGCGGCGGTGCTCCACTCCGGCGGCAAGTCGTGGGCG
ACGAGCTACTGCGGCCACCTCAAGATGAAGAAGCTGGACGCGGGATGGTCGGAGTTCGCG
GTGGACAACCGGCTCCTGGTCGGGGACGCCTGCGTCTTCGAGCTCGTCGCCATGGGCGCC
GCCGGAGGTCTGGAGTTCCAGGTGCAGATACTCCGCGGCGGCCTGCCGGCGGAGGTCGTC
ACCTCCAAGGGCCTCACCTCCGACCAACCCATCCTCATCGTCGACTAG

Peptide Sequence

PEP ID

Os06t0112300-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:696034:698216:1 gene:Os06g0112300 transcript:Os06t0112300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os06t0112300-01)
Sequence

MELDTDPTKLKAKPIIKPKVEPCDDDDELPPPPPPASGSGEDWEATTPLAAGNPFFTALI
AKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLDAGWSEFA
VDNRLLVGDACVFELVAMGAAGGLEFQVQILRGGLPAEVVTSKGLTSDQPILIVD

Transcript Sequence

Transcript ID

Os06t0112300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:696034:698216:1 gene:Os06g0112300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcriptional factor B3 family protein. (Os06t0112300-01)
Sequence

AGATACAGCCCTTGACTCTGCTGCCTCTTCAGTTCAGATGGAGCTGGACACTGATCCTAC
CAAGCTGAAGGCCAAGCCCATCATCAAACCAAAAGTAGAACCCTGCGACGACGATGACGA
GTTGCCGCCGCCGCCGCCGCCGGCTTCAGGATCCGGCGAGGATTGGGAGGCCACCACCCC
TCTCGCCGCCGGCAACCCCTTCTTCACCGCCCTCATCGCCAAGTCTCATCTCCACCCCAA
GTTCCAGATGTGGATTCCACCTCGGTTCCAGCATCGGCTGGCGGAGCCGGAGGCGCGCAC
GGCGGCGGTGCTCCACTCCGGCGGCAAGTCGTGGGCGACGAGCTACTGCGGCCACCTCAA
GATGAAGAAGCTGGACGCGGGATGGTCGGAGTTCGCGGTGGACAACCGGCTCCTGGTCGG
GGACGCCTGCGTCTTCGAGCTCGTCGCCATGGGCGCCGCCGGAGGTCTGGAGTTCCAGGT
GCAGATACTCCGCGGCGGCCTGCCGGCGGAGGTCGTCACCTCCAAGGGCCTCACCTCCGA
CCAACCCATCCTCATCGTCGACTAGCTTAGCTATCGATCTAGCCACAGTACTAAATCATC
AAACTCCACTATTAATTCCACTGTCACTAGCTCGATCGGTAATTAAAGGCAAGGAGCTTT
AATTTGGTGTCAAGCAAAAATTTATCCAACCAACTTATGTATGATGTACTGCAGCAGCTG
CAATGGCTACTGTAGGGATTGTAGTTTGCTACTATATCTGTTTGCAGGACGGATCCAGGA
ACAAAAAAATAATTAGGGG