Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0111700-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:657277:659068:1 gene:Os06g0111700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os06t0111700-01)
Sequence	ATGCCCGGCGGGCCCTCCCGCGCCGCCGATGCGGACGACGACGACGACGACGAGCTCTCG CGCCTCCTCTCCCTGGCCGAGGCCGACCTCGAGGCCGGCCGCCTCCGCGCCGCGCACAAG CACGCCCGCCGCGCCGCCCGCCTCGACCCGGACTCCACCCGCGCCTCGCTCCTCCTCACC GCCGTCTCCGTCCTCGCCGCCGACGACTCCTCCCACCGCGCCACCCTCCTCCTCCCCGAC TCCCCCCACTCCCAGGCCTCGCCCCTCTCACCCTCCGCCCTCCGCCGCCACTACAAATCC CTCTCCGAATCCCTCCGCTCCGCCCCGCCCTCCTCTTCCCCCGCCGTCTCCTCCGCCGTC AAGGAGGCGCTCCGCCGCGCCGCCGACGCCTACGCCGCGCTCGCCAACCAGGCCGCCGCC CCCGTCCCGCCCACCTTCTGGACGGCCTGCGCCGGCTGCCGCCTCCTCCATGAGTTCGAC CGCAAGTACGTCGGATTCCGCCTCATGTGCCCCTCCTGCCGCCGCACCTTCCTCGCCTCC GAAGTGCCCCCTCCGCCGGAGGCTGAGGCGGAGGCGGAGCCAGACCCGCTGCCGCCGGCT AAGAAGAAGCCCAAAACCCAGAAGCGTGAGATGACGCTCGCCGAGATGCAGCTCCAGCTC TCCAAGAAAAGAGCAACCAACAACTCATCCAGACTCGACGAGGATGACGACGATGACAAT GACGATGACGATGACGATGATGAGGGAGAGGAGCAGCAGCAGAACAACGACTCTGAGATG ATGGATGTGGAGGACTCAGACTTCTACAACTTCGACGCCGACCGCTGCGAGAAGTGCTTC AAGAGAGGCCAGGTGTGGGCATTGTACGGTGATGATGACGGTATGCCTCGTCACTATGCG CTGGTGGAGATGATTACACCAGGGGGCCGATTCCGTGCACAGATAAGGTGGCTTGATCTC CAGCCAGATGGAGGGGAGGGGACGCCATGTGGGGAGTTCAAGGTCGGGAGAACGGTTACC GTGCATTCAGTGAACATCTTCTCGCATCAGGTCGCCTATGAGAGGGTGGCGAGGGAGGTG TACCGGATTTACCCCAAGAAGGGCTCGGTTTGGGCGCTCCATGGCGGAAAGGATGCCGAT TCGGGGAGGCCAAAGTATGAGTTTGTGGTGTTCCTCAGTGGGTACAGTGACCTTTATGGT GCCAGCTTCGGCTACCTGGAGAAGGTGGAAGGTTTCAGGAGCATCTTTACCCGCCAGGAT GTCGGTCGCGATGCTGTCCAGACCCTTCACAAGGGAGATATGGGGAAACTCTCGCATCAG ATTCCGGCGAGGAGAGCGCCCAAGGGTGAAGGCTCAACCCTGCCTCCTACTGATTGCTGG GAGCTTGACCCTGCATCATTGCCTTCTGAGTTGCTGCATGACAATCAGCAGAAATAG

Peptide Sequence

PEP ID	Os06t0111700-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:657277:659068:1 gene:Os06g0111700 transcript:Os06t0111700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os06t0111700-01)
Sequence	MPGGPSRAADADDDDDDELSRLLSLAEADLEAGRLRAAHKHARRAARLDPDSTRASLLLT AVSVLAADDSSHRATLLLPDSPHSQASPLSPSALRRHYKSLSESLRSAPPSSSPAVSSAV KEALRRAADAYAALANQAAAPVPPTFWTACAGCRLLHEFDRKYVGFRLMCPSCRRTFLAS EVPPPPEAEAEAEPDPLPPAKKKPKTQKREMTLAEMQLQLSKKRATNNSSRLDEDDDDDN DDDDDDDEGEEQQQNNDSEMMDVEDSDFYNFDADRCEKCFKRGQVWALYGDDDGMPRHYA LVEMITPGGRFRAQIRWLDLQPDGGEGTPCGEFKVGRTVTVHSVNIFSHQVAYERVAREV YRIYPKKGSVWALHGGKDADSGRPKYEFVVFLSGYSDLYGASFGYLEKVEGFRSIFTRQD VGRDAVQTLHKGDMGKLSHQIPARRAPKGEGSTLPPTDCWELDPASLPSELLHDNQQK

Transcript Sequence

Transcript ID	Os06t0111700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:657277:659068:1 gene:Os06g0111700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os06t0111700-01)
Sequence	AACTCAACTCGACTCAACCAAGCCAGGTTGAGGCGGCGCGGCGACCAAACCCCCACACCC GCAACCACCCACCACCCGCCGCCGATGCCCGGCGGGCCCTCCCGCGCCGCCGATGCGGAC GACGACGACGACGACGAGCTCTCGCGCCTCCTCTCCCTGGCCGAGGCCGACCTCGAGGCC GGCCGCCTCCGCGCCGCGCACAAGCACGCCCGCCGCGCCGCCCGCCTCGACCCGGACTCC ACCCGCGCCTCGCTCCTCCTCACCGCCGTCTCCGTCCTCGCCGCCGACGACTCCTCCCAC CGCGCCACCCTCCTCCTCCCCGACTCCCCCCACTCCCAGGCCTCGCCCCTCTCACCCTCC GCCCTCCGCCGCCACTACAAATCCCTCTCCGAATCCCTCCGCTCCGCCCCGCCCTCCTCT TCCCCCGCCGTCTCCTCCGCCGTCAAGGAGGCGCTCCGCCGCGCCGCCGACGCCTACGCC GCGCTCGCCAACCAGGCCGCCGCCCCCGTCCCGCCCACCTTCTGGACGGCCTGCGCCGGC TGCCGCCTCCTCCATGAGTTCGACCGCAAGTACGTCGGATTCCGCCTCATGTGCCCCTCC TGCCGCCGCACCTTCCTCGCCTCCGAAGTGCCCCCTCCGCCGGAGGCTGAGGCGGAGGCG GAGCCAGACCCGCTGCCGCCGGCTAAGAAGAAGCCCAAAACCCAGAAGCGTGAGATGACG CTCGCCGAGATGCAGCTCCAGCTCTCCAAGAAAAGAGCAACCAACAACTCATCCAGACTC GACGAGGATGACGACGATGACAATGACGATGACGATGACGATGATGAGGGAGAGGAGCAG CAGCAGAACAACGACTCTGAGATGATGGATGTGGAGGACTCAGACTTCTACAACTTCGAC GCCGACCGCTGCGAGAAGTGCTTCAAGAGAGGCCAGGTGTGGGCATTGTACGGTGATGAT GACGGTATGCCTCGTCACTATGCGCTGGTGGAGATGATTACACCAGGGGGCCGATTCCGT GCACAGATAAGGTGGCTTGATCTCCAGCCAGATGGAGGGGAGGGGACGCCATGTGGGGAG TTCAAGGTCGGGAGAACGGTTACCGTGCATTCAGTGAACATCTTCTCGCATCAGGTCGCC TATGAGAGGGTGGCGAGGGAGGTGTACCGGATTTACCCCAAGAAGGGCTCGGTTTGGGCG CTCCATGGCGGAAAGGATGCCGATTCGGGGAGGCCAAAGTATGAGTTTGTGGTGTTCCTC AGTGGGTACAGTGACCTTTATGGTGCCAGCTTCGGCTACCTGGAGAAGGTGGAAGGTTTC AGGAGCATCTTTACCCGCCAGGATGTCGGTCGCGATGCTGTCCAGACCCTTCACAAGGGA GATATGGGGAAACTCTCGCATCAGATTCCGGCGAGGAGAGCGCCCAAGGGTGAAGGCTCA ACCCTGCCTCCTACTGATTGCTGGGAGCTTGACCCTGCATCATTGCCTTCTGAGTTGCTG CATGACAATCAGCAGAAATAGCCGATGTGGTAACTTCGAGAAAGTATCTTAGCTGATAGG ATTGTTCATACTGTAGAATTTGTCGGAGGTCATAGGTCTGTGGTGGTCTGCCTAGTGAAA TGATCCGGTGATGCATTTGCTTCACCTGCTTTGGATGTATGTTCCTCCATGCTTATGGCT CCTCGTCAAGGTAGAGATTTAGATAGCGGGATACTTGTACCTGATGCTGTGTTCAATTCC ACCATCAACAACTTTCAGTGCATGAAATGAATCATCTTTTGGTATTGATGGT