Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0111300-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:629986:633799:-1 gene:Os06g0111300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0111300-00)
Sequence	ATGGCGGCGGCGATCGCCGGCGCCGCCGCATCCACCGCCGTATCCATCACCTGCTCCTCC TACTCCTACGAAGACGACGGAGCCGCCACCTCATGGTCGCTCTCATCCGGCACGTCGTCG TCGTCCTCCTCCTCCCAGCGCCAGCGCCCGTACCGGCGCCTCCTCCACGACGAGGCGCAG CGCCTCCGCCGCGAGCGCCGGGGGCAAGGGAGCGGCGCGCACACGCCCCGGTGGGTCCGC CGCACCCCGGACCAGATGGCCCGCTACGTCGAGGACGACCGCGCCGGCCACGTGTACGGC CGCCACGTGGTCGCCGCCGTCCGCGCGGCGCGCGCCACGGCGTCCTGCTCCAGCCCCTCC TCCGCCGACATGCGCGAGGCCATGGCGTCGTTCGTCGCGAAGCTCACCTTCCGCGAGATG TGCTTCGTGCTCCACGAGCTCCGCGGCTGGCGCCAGGCCCGCGATTTCTTCGCCTGGATG AAGCTTCAGCTGTGCTACGAACCGAGCGTTGTCGCCTACACAATCCTTCTCAGATTGTAC GGTCAGGTTGGGAAGGTCAAGCTCGCCGAGGTGACATTTCTTGAGATGCTTCAGGCCGGG TGCGAGCCAGACGCAGTGGCATGTGGAACCCTCCTGTGCGCGTACGCAAGATGGGGGAAG CTCAATGACATGTTGATGTTCTACGCCGCGGTGCGCCGCCGCGACATTGTGCCCTCCATC TCGGTCTTCAATTTCATGGTCTCATCTCTGCAGAAGCAGAAATTACATGGCAAGGTAATC CACCTGTGGGAGCAGATGCTGGAAGCCAATGTTGCCCCAAATCAGTTCACATATACAGTT GTGATCGGGTCATATGCCAAGGAAGGTATGTTGGAGGAGGCCATGGATGCATTTGGTGAG ATGAAGCGCCGCAGATTTGTGCCGGAGGAGGCGACATACAGCCTTCTGATCAGCTTGTGT GCCAAGCATGGCAAAGGGGAAGAGGCATTGGGGCTTTATGATGAGATGAAGGTTAAGAGT ATTGTCCCAAGCAACTACACATGTGCATCTGTCCTGACACTCTATTACAAGAATGAGGAT TACTCGAAGGCGCTTTCGCTGTTCTCTGAGATGGAGCAGAATAAGATTGTTCCTGATGAA GTTATCTATGGAATTCTTGTTAGGATATATGGTAAGCTTGGGCTTTATGAGGACGCGCAG CGTATGTTCGAGGAGATTGACAAGGCAGGTCTTTTGAGCGATGAGCAAACTTATGTGGCA ATGGCTCAAGTTCATATGAATGTCCAAAACTATGATAGAGCATTGCAAGTTTTGGATGCT ATGAGGGCGAGAAATGTAAAGCCATCACAATTCTCCTACAGTGCTCTTCTCCGATGTCAT GTGGCAAAGGAAGATGTGGATGCTGCTGAAGATACTTTCAGAGCTCTCTCCAATTATGGC CCGCCCGATGTGTTTTGCTGTAATGATCTTCTCAGGTTATATATGAGGCTTGGCCATCTA GACAAGGCCAGGGCACTCATTCTGAAAATGAGGAAGGAAGCTCTCCAGTTTGATGAGGAT CTATGTGTGACTGTGTTGGAAGTTTGTTGCAAAACCAGTATAAATAAGGATACGGATAAT TTAACTGAAGTGATTCAGAATGAAGGTAGCTCATCAAAGGTGCTAAATCCAACAGATAGT TCAACACTTAGTATGATGTTGAAATCCTTGTTGGACAAACCTGGGGGCTTGTCCAGTGTG TCCCAATTGATCATGAAATTTGCTAGGGAAGGTGAGGAGGCTAGATGCCGCACATAA

Peptide Sequence

PEP ID	Os06t0111300-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:629986:633799:-1 gene:Os06g0111300 transcript:Os06t0111300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0111300-00)
Sequence	MAAAIAGAAASTAVSITCSSYSYEDDGAATSWSLSSGTSSSSSSSQRQRPYRRLLHDEAQ RLRRERRGQGSGAHTPRWVRRTPDQMARYVEDDRAGHVYGRHVVAAVRAARATASCSSPS SADMREAMASFVAKLTFREMCFVLHELRGWRQARDFFAWMKLQLCYEPSVVAYTILLRLY GQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYAAVRRRDIVPSI SVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGE MKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLYYKNED YSKALSLFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVA MAQVHMNVQNYDRALQVLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYG PPDVFCCNDLLRLYMRLGHLDKARALILKMRKEALQFDEDLCVTVLEVCCKTSINKDTDN LTEVIQNEGSSSKVLNPTDSSTLSMMLKSLLDKPGGLSSVSQLIMKFAREGEEARCRT

Transcript Sequence

Transcript ID	Os06t0111300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:629986:633799:-1 gene:Os06g0111300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os06t0111300-00)
Sequence	CGCTCCTCACCCTCCAATGGCGGCGGCGATCGCCGGCGCCGCCGCATCCACCGCCGTATC CATCACCTGCTCCTCCTACTCCTACGAAGACGACGGAGCCGCCACCTCATGGTCGCTCTC ATCCGGCACGTCGTCGTCGTCCTCCTCCTCCCAGCGCCAGCGCCCGTACCGGCGCCTCCT CCACGACGAGGCGCAGCGCCTCCGCCGCGAGCGCCGGGGGCAAGGGAGCGGCGCGCACAC GCCCCGGTGGGTCCGCCGCACCCCGGACCAGATGGCCCGCTACGTCGAGGACGACCGCGC CGGCCACGTGTACGGCCGCCACGTGGTCGCCGCCGTCCGCGCGGCGCGCGCCACGGCGTC CTGCTCCAGCCCCTCCTCCGCCGACATGCGCGAGGCCATGGCGTCGTTCGTCGCGAAGCT CACCTTCCGCGAGATGTGCTTCGTGCTCCACGAGCTCCGCGGCTGGCGCCAGGCCCGCGA TTTCTTCGCCTGGATGAAGCTTCAGCTGTGCTACGAACCGAGCGTTGTCGCCTACACAAT CCTTCTCAGATTGTACGGTCAGGTTGGGAAGGTCAAGCTCGCCGAGGTGACATTTCTTGA GATGCTTCAGGCCGGGTGCGAGCCAGACGCAGTGGCATGTGGAACCCTCCTGTGCGCGTA CGCAAGATGGGGGAAGCTCAATGACATGTTGATGTTCTACGCCGCGGTGCGCCGCCGCGA CATTGTGCCCTCCATCTCGGTCTTCAATTTCATGGTCTCATCTCTGCAGAAGCAGAAATT ACATGGCAAGGTAATCCACCTGTGGGAGCAGATGCTGGAAGCCAATGTTGCCCCAAATCA GTTCACATATACAGTTGTGATCGGGTCATATGCCAAGGAAGGTATGTTGGAGGAGGCCAT GGATGCATTTGGTGAGATGAAGCGCCGCAGATTTGTGCCGGAGGAGGCGACATACAGCCT TCTGATCAGCTTGTGTGCCAAGCATGGCAAAGGGGAAGAGGCATTGGGGCTTTATGATGA GATGAAGGTTAAGAGTATTGTCCCAAGCAACTACACATGTGCATCTGTCCTGACACTCTA TTACAAGAATGAGGATTACTCGAAGGCGCTTTCGCTGTTCTCTGAGATGGAGCAGAATAA GATTGTTCCTGATGAAGTTATCTATGGAATTCTTGTTAGGATATATGGTAAGCTTGGGCT TTATGAGGACGCGCAGCGTATGTTCGAGGAGATTGACAAGGCAGGTCTTTTGAGCGATGA GCAAACTTATGTGGCAATGGCTCAAGTTCATATGAATGTCCAAAACTATGATAGAGCATT GCAAGTTTTGGATGCTATGAGGGCGAGAAATGTAAAGCCATCACAATTCTCCTACAGTGC TCTTCTCCGATGTCATGTGGCAAAGGAAGATGTGGATGCTGCTGAAGATACTTTCAGAGC TCTCTCCAATTATGGCCCGCCCGATGTGTTTTGCTGTAATGATCTTCTCAGGTTATATAT GAGGCTTGGCCATCTAGACAAGGCCAGGGCACTCATTCTGAAAATGAGGAAGGAAGCTCT CCAGTTTGATGAGGATCTATGTGTGACTGTGTTGGAAGTTTGTTGCAAAACCAGTATAAA TAAGGATACGGATAATTTAACTGAAGTGATTCAGAATGAAGGTAGCTCATCAAAGGTGCT AAATCCAACAGATAGTTCAACACTTAGTATGATGTTGAAATCCTTGTTGGACAAACCTGG GGGCTTGTCCAGTGTGTCCCAATTGATCATGAAATTTGCTAGGGAAGGTGAGGAGGCTAG ATGCCGCACATAACATTGTATTCATGCTTGAACATACTGCTTCTTACTGCTGGCTCTACA TGGATTCTTCTGCAGGGAGTACAGATGAGGCCAAATTCCTCTATGAACACCTTACTGAAT TGGGAGCCAAGCCTGATGATACTGCAATAGCTACTTTAATTGTACAATATGGCCAGGCCC AGCAGTTGGAACAAGCACAAAAACTGTTTGAGACAGCATCAACATCGTTTCCAGTAGGAG GATCTGTCTACAATGCAATGGTTGATGCATTGTGCAGATGTGGCAAAACTGAGGAGGCAT ATCGTCTTTTCATGGAATTGATCGATCAAGGTCATAATGGAGATGCCGTGACAATAAGCA TACTTGTCACACACCTGACTAAGCAAGAGAAATTTCAGGAGGCAGAAAACATCATATATC GCTGTTTACACGATGAAGCTGAGCTCGACACTGTTGTATATAATACTTTTATCAAGTCAA TGCTTGAATCAGGCAAACTGTACTCAGCTGTCAGCATATATGATCGCATGATATCTTCTG GCATTCCTCGGTCCATGCAGACATTCAATATAATGATAAGTGTTTATGGCCAAGGAGGAA AGCTGGAGAAGGCTGTTGAAATGTTTAGTGCTGCACAGGAACTAGGCTTACCGATTGATG AGAAAACATACACAAACATGCTTAGTTTCTATGGAAAAGCAGGGAAGCATCATGAGGCAT CCTTACTGTTCAGTAGAATGAAGGAAGATGGTATCAGGCCTGGAAAGATCAGCTTCAACA CCATGATCAATGCCTATGCCACTTCAGGATTGCACAATGAGGCAGAGATTATATTCCAAG AAATGCAGAAAAACAATCATGTGCCTGATTCGCACACATATCTTGCTTTGATCAGAGCAT ACACTGAGGGTAAATGCTACTCCAAAGCTGAGGAAGCCATCCAGATGATGCTGAGAAGCA ACATGACCCCTTCATGCACTCATTTCAACCATCTCATTTCCGCCTTTCTGAAGGAAGGTC AGATTGATGAAGCCCAGAGGATGTACAACCAAATGGAGGAGGCAGGCATACCTGCTGACT TGGCATGTTGTCGGACGATGATGAGGATGCATCTGGATCACGGTTACGTCGATGATGGCA TCTTGTTCTTCGAAACGGCATGTCGACTTCTGAAACCGGATAGCTTCATCCTGAGTGCTG CATTTCATCTCTATGAACATTCAGGCAGGGAGTCTGAAGCTGGGGATGTCCTAGATGCCA TCAATATGAGTGGTGCCTCTTTCTTGCGTAATCTAAAGGTTGGAT