Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0109400-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:550937:555650:1 gene:Os06g0109400 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os06t0109400-01)
Sequence	ATGGGGAAGCGCGCGCGCCACGGCGGCTCCGGCAGGTCCCACTCCCCCTACTTCGAGTCC CAGCTCCGCCGCCTCATCACCGACGGCGGACTCTCCTCCTCCTCCGCCGAGGACGTCGCC ATCGCCCTCCGCTCCCGCTTCCCCGAGTTCCGCCGCCACAAGCTCGACCCCTTCACCTCC GCCGTCCGCCGCGCCCTCAACTCCATCCCCTCCGACTCCCACTCCGACTCCGCCGACGAC TCCCACGCCTCCACTCCCTCCCAACGCCGCCGCCGCCGCCCCCGCCACGACGCCCATGCC ACCGCCTCATCCTCCACCTCCCTCTCCGACGACGCCGCGCACCCACCGCCTCCCCCCATC TACGACGTCACCAAGTCCATGCTCCGCACCCAGTACGCCTCCCAGACTCCCAAGCGAGAC ACCGGCAGCAACCAGCAGCTGGAAATCGAGATCGCCGCCGAGAAGCCCCGCCGATTAATC ACCTCCGATGGCGGCGCCGGCGGCGAGGCCAAGCCGGAGTCCGCTCCACCTAGCGAAGGA GGCGATAGAGGGGGCAAGGGGCCCACGTTTTCGGATCTTGGGGGGATGGAGTCGGTGATA GAGCAGCTAATGATGGAGGTGGTGGTGCCCCTATGCCATCCGGAGGTGCCGCGCTGGCTT GGGGTTAAGCCTGTGGCTGGGCTGCTGCTGCACGGGCCACCAGGCTGCGGCAAGACCACG CTCGCTCATGCCATCGCCAATGAGACCGGCGTGCCATTCTACAAGATATCGGCGCCGGAG GTTGTGTCCGGGGTCTCTGGGGCTTCTGAGGAAAACATCAGAAGCCTGTTTAAGAAGGCG TACAGGACTGCTCCATCAATTGTATTTATAGATGAGATAGATGCGATTGCATCCAAGAGG GAGAATCTGCAACGGGAAATGGAACGACGGATAGTTACACAGTTAATGACATGCATGGAT GAATACCACCAACAAATTGGCTCTGGTAGCGGTGATGTGGGTTCAGAGTCAGCTGAAAAG AAACCTGGCTATGTTATTGTCATTGGAGCTACAAATAGACCTGACGCTGTTGACCAAGCA CTTCGTAGGCCAGGAAGGTTTGATCGAGAGATCTCTCTTGGTGTTCCAGATGAGTATGCA CGGAAAAAGATACTTATGATGCTTACCCGGAATCTTCGACTGGAAGGTCAGTTGGACTTG TTGAAGATAGCAAGGGCCACATCAAGCTTTGTTGGTGCGGACTTGAAGGCATTGGTGGAT AAAGCGGGGAATCTAGCAATGAAGAGAATAATTGATAGAAGAAGAGCTCAGTTTTGTCAG GAGCATGATGAAAACAGCAAGCACGACTGGTGGAGACAACCTTGGGATGCAAATGAGATA GAGGGCCTGAGTATTACAATGGATGATTTTGAGGAAGCAACCAAGATGGTTCAACCATCT TTGAGAAGAGAAGGATTTTCTTCTATCCCTGATGTCACATGGGATGACGTTGGAGGCCTT GATTCGCTAAGGAAAGAGTTTGACCGCTACATTATCCGATGTATCAAGCAACCTGAAGAA TATAAGACATTTGGATTGAATATGCAAGCTGGCTTTTTGCTGTTTGGACCACCCGGTTGT GGGAAAACACTGATAGCAAAAGCAGTTGCGCATGAGGCAGGGGCAAATTTTATTCATATT AAGGGGCCAGAGCTGTTGAACAAGTATGTTGGTGAGAGTGAATCAGAAGTTAGGAAAATT TTCATCCGTGCACAAACTAATACACCATGCATCCTGTTTTTTGACGAGGTAGATGCTTTG ACAACAAAAAGAGGGAAAGAGGGGGGATGGGTTGTTGAACGTCTCCTGAACCAGTTGCTT ATTGAACTTGATGGTGCTGGTGAACGGAAAGGTGTTTTTGTTATTGGAGCTACAAACAGA ATTGATGTGATAGATGATGCAGCACTTCGACCTGGTAGATTTGGCAAGAAACATTATGTA CCTTTACCTGGTGCTGATGAGCGGGTTTCGATATTGAGAGCCCTCGCTCGGAACAAACCG ATCTCCTCCAGTGTTGATTTGGGTGCACTGGCACGTAGAGAGGAATGCAAAAATCTCACT GGTGCTGACCTAGCATCAATGGTGAATGAAGCAGCCATGGCAGCATTGGAAGAGAGGCTG GAGTTCCTGGAGAATGGGGAATCGTCAATGAGCTCATCATCTGCGATTGAGCTCCCTCAT TTTGAACGTGCTCTAGCAAAAATGCAGCCATCAGTATCTGAACAGCAAAGGAGACACTAC GAGGCGTTGTGCAAGAAATACTCCGCAAGCTGA

Peptide Sequence

PEP ID	Os06t0109400-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:550937:555650:1 gene:Os06g0109400 transcript:Os06t0109400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os06t0109400-01)
Sequence	MGKRARHGGSGRSHSPYFESQLRRLITDGGLSSSSAEDVAIALRSRFPEFRRHKLDPFTS AVRRALNSIPSDSHSDSADDSHASTPSQRRRRRPRHDAHATASSSTSLSDDAAHPPPPPI YDVTKSMLRTQYASQTPKRDTGSNQQLEIEIAAEKPRRLITSDGGAGGEAKPESAPPSEG GDRGGKGPTFSDLGGMESVIEQLMMEVVVPLCHPEVPRWLGVKPVAGLLLHGPPGCGKTT LAHAIANETGVPFYKISAPEVVSGVSGASEENIRSLFKKAYRTAPSIVFIDEIDAIASKR ENLQREMERRIVTQLMTCMDEYHQQIGSGSGDVGSESAEKKPGYVIVIGATNRPDAVDQA LRRPGRFDREISLGVPDEYARKKILMMLTRNLRLEGQLDLLKIARATSSFVGADLKALVD KAGNLAMKRIIDRRRAQFCQEHDENSKHDWWRQPWDANEIEGLSITMDDFEEATKMVQPS LRREGFSSIPDVTWDDVGGLDSLRKEFDRYIIRCIKQPEEYKTFGLNMQAGFLLFGPPGC GKTLIAKAVAHEAGANFIHIKGPELLNKYVGESESEVRKIFIRAQTNTPCILFFDEVDAL TTKRGKEGGWVVERLLNQLLIELDGAGERKGVFVIGATNRIDVIDDAALRPGRFGKKHYV PLPGADERVSILRALARNKPISSSVDLGALARREECKNLTGADLASMVNEAAMAALEERL EFLENGESSMSSSSAIELPHFERALAKMQPSVSEQQRRHYEALCKKYSAS

Transcript Sequence

Transcript ID	Os06t0109400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:550937:555650:1 gene:Os06g0109400 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, AAA-type, core domain containing protein. (Os06t0109400-01)
Sequence	CCCTCCTCCTCCTCCTCTGCCGCCGCCGCCGGCGATGGGGAAGCGCGCGCGCCACGGCGG CTCCGGCAGGTCCCACTCCCCCTACTTCGAGTCCCAGCTCCGCCGCCTCATCACCGACGG CGGACTCTCCTCCTCCTCCGCCGAGGACGTCGCCATCGCCCTCCGCTCCCGCTTCCCCGA GTTCCGCCGCCACAAGCTCGACCCCTTCACCTCCGCCGTCCGCCGCGCCCTCAACTCCAT CCCCTCCGACTCCCACTCCGACTCCGCCGACGACTCCCACGCCTCCACTCCCTCCCAACG CCGCCGCCGCCGCCCCCGCCACGACGCCCATGCCACCGCCTCATCCTCCACCTCCCTCTC CGACGACGCCGCGCACCCACCGCCTCCCCCCATCTACGACGTCACCAAGTCCATGCTCCG CACCCAGTACGCCTCCCAGACTCCCAAGCGAGACACCGGCAGCAACCAGCAGCTGGAAAT CGAGATCGCCGCCGAGAAGCCCCGCCGATTAATCACCTCCGATGGCGGCGCCGGCGGCGA GGCCAAGCCGGAGTCCGCTCCACCTAGCGAAGGAGGCGATAGAGGGGGCAAGGGGCCCAC GTTTTCGGATCTTGGGGGGATGGAGTCGGTGATAGAGCAGCTAATGATGGAGGTGGTGGT GCCCCTATGCCATCCGGAGGTGCCGCGCTGGCTTGGGGTTAAGCCTGTGGCTGGGCTGCT GCTGCACGGGCCACCAGGCTGCGGCAAGACCACGCTCGCTCATGCCATCGCCAATGAGAC CGGCGTGCCATTCTACAAGATATCGGCGCCGGAGGTTGTGTCCGGGGTCTCTGGGGCTTC TGAGGAAAACATCAGAAGCCTGTTTAAGAAGGCGTACAGGACTGCTCCATCAATTGTATT TATAGATGAGATAGATGCGATTGCATCCAAGAGGGAGAATCTGCAACGGGAAATGGAACG ACGGATAGTTACACAGTTAATGACATGCATGGATGAATACCACCAACAAATTGGCTCTGG TAGCGGTGATGTGGGTTCAGAGTCAGCTGAAAAGAAACCTGGCTATGTTATTGTCATTGG AGCTACAAATAGACCTGACGCTGTTGACCAAGCACTTCGTAGGCCAGGAAGGTTTGATCG AGAGATCTCTCTTGGTGTTCCAGATGAGTATGCACGGAAAAAGATACTTATGATGCTTAC CCGGAATCTTCGACTGGAAGGTCAGTTGGACTTGTTGAAGATAGCAAGGGCCACATCAAG CTTTGTTGGTGCGGACTTGAAGGCATTGGTGGATAAAGCGGGGAATCTAGCAATGAAGAG AATAATTGATAGAAGAAGAGCTCAGTTTTGTCAGGAGCATGATGAAAACAGCAAGCACGA CTGGTGGAGACAACCTTGGGATGCAAATGAGATAGAGGGCCTGAGTATTACAATGGATGA TTTTGAGGAAGCAACCAAGATGGTTCAACCATCTTTGAGAAGAGAAGGATTTTCTTCTAT CCCTGATGTCACATGGGATGACGTTGGAGGCCTTGATTCGCTAAGGAAAGAGTTTGACCG CTACATTATCCGATGTATCAAGCAACCTGAAGAATATAAGACATTTGGATTGAATATGCA AGCTGGCTTTTTGCTGTTTGGACCACCCGGTTGTGGGAAAACACTGATAGCAAAAGCAGT TGCGCATGAGGCAGGGGCAAATTTTATTCATATTAAGGGGCCAGAGCTGTTGAACAAGTA TGTTGGTGAGAGTGAATCAGAAGTTAGGAAAATTTTCATCCGTGCACAAACTAATACACC ATGCATCCTGTTTTTTGACGAGGTAGATGCTTTGACAACAAAAAGAGGGAAAGAGGGGGG ATGGGTTGTTGAACGTCTCCTGAACCAGTTGCTTATTGAACTTGATGGTGCTGGTGAACG GAAAGGTGTTTTTGTTATTGGAGCTACAAACAGAATTGATGTGATAGATGATGCAGCACT TCGACCTGGTAGATTTGGCAAGAAACATTATGTACCTTTACCTGGTGCTGATGAGCGGGT TTCGATATTGAGAGCCCTCGCTCGGAACAAACCGATCTCCTCCAGTGTTGATTTGGGTGC ACTGGCACGTAGAGAGGAATGCAAAAATCTCACTGGTGCTGACCTAGCATCAATGGTGAA TGAAGCAGCCATGGCAGCATTGGAAGAGAGGCTGGAGTTCCTGGAGAATGGGGAATCGTC AATGAGCTCATCATCTGCGATTGAGCTCCCTCATTTTGAACGTGCTCTAGCAAAAATGCA GCCATCAGTATCTGAACAGCAAAGGAGACACTACGAGGCGTTGTGCAAGAAATACTCCGC AAGCTGATATATATTGCGCCATGCTTACAGAGATCCATGTCCTCTGAGTTGCTTGCAGGG AAAATACAGGTTTCGCTTGCAACCAATTTTGGTTTTGCCCTTTTTTTTTGTTCCCCTTTG AGTAGGCCTTGTGGCAATTTTGTGCGACCGAAACATAGATGGTTGAGTGAGTAGTAGTAT GAATATGCGAGAAAAATAGTTGTTTTTTTTTTCTTTTCACTTATTGTACCATTCATCATC TTGTATTGTAATACAAACTTCATATTGGTTATGAGATTGCATAATCATCCAATTAAGCCC CTACTATGCTCCAAGTTG