Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0108600-00
CDS Infomation	cds chromosome:IRGSP-1.0:6:511889:512791:-1 gene:Os06g0108600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 17 description:Similar to Expansin-A17. (Os06t0108600-00)
Sequence	AATAATCCGGCCATCTTCCTCGCCGCCGCGCTGGCGGTGGCGACGGCGGCGCAGGTCGTC ACGGCCGGTTTCACCACAGACTTGTACTGGCAGCAACAGCCGGCGCCTGGTGCCGTCACC CCCTACAAGACATCGGACTGGCACGACGGCTCCGCCACCTTCTACGGCGACCCCTCCGGC ATGGGCGACGACTTCGGTGGCGCGTGCGGGTACGTGTCGAACGACATCGTGTCGCTCTAC TCGACGAAGACGGCGGCGCTGAGCACGCCGCTGTTCGCCGACGGCAACGGGTGCGGGCAG TGCTACGAGCTGCGGTGCGTCAAGTCGCCGTGGTGCAACCCGGGGTCGCCGTCGGTGGTC ATCACGGGGACCAACCTGTGCCCGCCCAACTGGTACCTCCCCAACGACGACGGCGGCTGG TGCAACCCGCCGCGGCACCACTTCGACATGGCGCCGCCCTCCTTCCTCAAGCTCGCGCAG AGGGTCGCCGGGATCGTGCCGGTGCAGTACCGCCGCGTGCCGTGCCAGAGGACCGGCGGC GTCAGGTTCTGCCTCCAGGGGAACCACTACTGGTTGCTGCTCTACGTCATGAACGTCGGC GGCGCCGGCGACGTCTCCTCCCTCTCCGTCAAGACCTCCGGTGGCGGCGGCGCCTGGATC CAGGCGGCGCACAACTGGGGCATCACGTACCAGGTGTTCGCCGCGCTGGACAACTCCGAC GGCCTCACCGTCAAGCTCACCACCTACAGCACGCCGCAGCAGACCATCATCGTCTCCGAC GCCATCTCCCCCTGGTGGATCACCGG

Peptide Sequence

PEP ID	Os06t0108600-00
PEP Infomation	pep chromosome:IRGSP-1.0:6:511889:512791:-1 gene:Os06g0108600 transcript:Os06t0108600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 17 description:Similar to Expansin-A17. (Os06t0108600-00)
Sequence	NNPAIFLAAALAVATAAQVVTAGFTTDLYWQQQPAPGAVTPYKTSDWHDGSATFYGDPSG MGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSPWCNPGSPSVV ITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGG VRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSD GLTVKLTTYSTPQQTIIVSDAISPWWIT

Transcript Sequence

Transcript ID	Os06t0108600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:511889:512791:-1 gene:Os06g0108600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-EXPANSIN 17 description:Similar to Expansin-A17. (Os06t0108600-00)
Sequence	GGAATAATCCGGCCATCTTCCTCGCCGCCGCGCTGGCGGTGGCGACGGCGGCGCAGGTCG TCACGGCCGGTTTCACCACAGACTTGTACTGGCAGCAACAGCCGGCGCCTGGTGCCGTCA CCCCCTACAAGACATCGGACTGGCACGACGGCTCCGCCACCTTCTACGGCGACCCCTCCG GCATGGGCGACGACTTCGGTGGCGCGTGCGGGTACGTGTCGAACGACATCGTGTCGCTCT ACTCGACGAAGACGGCGGCGCTGAGCACGCCGCTGTTCGCCGACGGCAACGGGTGCGGGC AGTGCTACGAGCTGCGGTGCGTCAAGTCGCCGTGGTGCAACCCGGGGTCGCCGTCGGTGG TCATCACGGGGACCAACCTGTGCCCGCCCAACTGGTACCTCCCCAACGACGACGGCGGCT GGTGCAACCCGCCGCGGCACCACTTCGACATGGCGCCGCCCTCCTTCCTCAAGCTCGCGC AGAGGGTCGCCGGGATCGTGCCGGTGCAGTACCGCCGCGTGCCGTGCCAGAGGACCGGCG GCGTCAGGTTCTGCCTCCAGGGGAACCACTACTGGTTGCTGCTCTACGTCATGAACGTCG GCGGCGCCGGCGACGTCTCCTCCCTCTCCGTCAAGACCTCCGGTGGCGGCGGCGCCTGGA TCCAGGCGGCGCACAACTGGGGCATCACGTACCAGGTGTTCGCCGCGCTGGACAACTCCG ACGGCCTCACCGTCAAGCTCACCACCTACAGCACGCCGCAGCAGACCATCATCGTCTCCG ACGCCATCTCCCCCTGGTGGATCACCGG