Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0108500-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:494850:511404:1 gene:Os06g0108500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MIKC-type MADS-box transcription factor AGL1. (Os06t0108500-01)
Sequence	ATGGCGGCGGCGGGAGGGCAGCAGAGGCGGCGCGGCGGGCGGCGAGAGATGCGGCGGATC GAGGACACGACGAGGCGGCAGGTGACGTTCTCGAAGCGGCGGAAGGGGCTTCTGAAGAAG GCGTCGGAGCTGTCGGTGCTGTGCGACGCGGAGGTGGCGCTGCTCGTCTTCTCCCCGCGC GGCCGCTTCTTCCACTTCGCCTCCGCTCCCTCCCTGGAGGGGACAATCGACCGCTACATT AGCCACACCCAAGAGGCGCCTGCAAACAAGAAGCCCCGTGAACTTACTAATATGAAATCT CAATCCGAAACCTTAGCAATGGAGATTGACACAGTTGAGGCATACACAAGGAAGATGCAG GGCGAAAACCTGGAATCATGCTCGTTGCAAGAACTGCATGGCCTGGAGATGCAGATGGAG AAGAGCCTAAGCAGCATCCGTTTACAAAAGCAAAAGAAGCTGATGGATAAGATTTCACAG CTACAACAACAGGAGAAGATTCTGTCGGAGGAGAACGCACTGCTCCTCGATCAGGGCAAG GTGCAACATGCTCCAATCGGGGCTCCAGCGCGCGAGATGAATCAGAACCAGCATGTCCAG GATATTGATGTTGACACTGAGCTGGTCATTGGAAGACGGTGA

Peptide Sequence

PEP ID	Os06t0108500-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:494850:511404:1 gene:Os06g0108500 transcript:Os06t0108500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MIKC-type MADS-box transcription factor AGL1. (Os06t0108500-01)
Sequence	MAAAGGQQRRRGGRREMRRIEDTTRRQVTFSKRRKGLLKKASELSVLCDAEVALLVFSPR GRFFHFASAPSLEGTIDRYISHTQEAPANKKPRELTNMKSQSETLAMEIDTVEAYTRKMQ GENLESCSLQELHGLEMQMEKSLSSIRLQKQKKLMDKISQLQQQEKILSEENALLLDQGK VQHAPIGAPAREMNQNQHVQDIDVDTELVIGRR

Transcript Sequence

Transcript ID	Os06t0108500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:494850:511404:1 gene:Os06g0108500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to MIKC-type MADS-box transcription factor AGL1. (Os06t0108500-01)
Sequence	AGGTTTGGGATGCTTTCCTTTGCGAGGAAAATCAGCCAGCAGCGACATAGATCGATCTGT TCCCGGCCGGCGAGCCGGAGTAGATCTCTCGCATACCCTGCACGCACGTACTGCTTATGG CGGCGGCGGGAGGGCAGCAGAGGCGGCGCGGCGGGCGGCGAGAGATGCGGCGGATCGAGG ACACGACGAGGCGGCAGGTGACGTTCTCGAAGCGGCGGAAGGGGCTTCTGAAGAAGGCGT CGGAGCTGTCGGTGCTGTGCGACGCGGAGGTGGCGCTGCTCGTCTTCTCCCCGCGCGGCC GCTTCTTCCACTTCGCCTCCGCTCCCTCCCTGGAGGGGACAATCGACCGCTACATTAGCC ACACCCAAGAGGCGCCTGCAAACAAGAAGCCCCGTGAACTTACTAATATGAAATCTCAAT CCGAAACCTTAGCAATGGAGATTGACACAGTTGAGGCATACACAAGGAAGATGCAGGGCG AAAACCTGGAATCATGCTCGTTGCAAGAACTGCATGGCCTGGAGATGCAGATGGAGAAGA GCCTAAGCAGCATCCGTTTACAAAAGCAAAAGAAGCTGATGGATAAGATTTCACAGCTAC AACAACAGGAGAAGATTCTGTCGGAGGAGAACGCACTGCTCCTCGATCAGGGCAAGGTGC AACATGCTCCAATCGGGGCTCCAGCGCGCGAGATGAATCAGAACCAGCATGTCCAGGATA TTGATGTTGACACTGAGCTGGTCATTGGAAGACGGTGAAAATATTCAGATTTTACAGAAG TGGTTGTGGAAACAGTTCACAGAAGAGAAGTGAATGTGTTGATGAGGATCAACTTGTTGA CTGAGCGAGTTATACACAATTTGTTTGTAGCAAGTTGCTAAATTTATTTGTCGATATTAT ATAATCTTGCTATGAGGAGAAGGTAGTGGCGCCTATACATGCAGCATTGTATTCAGGCTT GTGTTTGACCAACAGACATGCTGTGCAGTTCGGATCGGATATACATAAACCAA