Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0107100-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:454843:457197:1 gene:Os06g0107100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF819 family protein. (Os06t0107100-01);Similar to predicted protein. (Os06t0107100-02)
Sequence	ATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAACCATTCCTATCGCCCGCTC CTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTGCGCCTCGGCCTCGCCCTCG CCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCCGCTCCGTGCCGCCGCCCTG CCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTGGGCCTTCCTCCTCTCCGCC GCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGGCGCCGCGCTCAGCGGCTCG CTCGTCAGCACCACCGGCGACCTCCTCAAGGCCTTCCTCATCGGATCAGTTGCAACTACA ATTGGCACAACGATAGCCTTTCTGTTGGTTCCTATGAAATCACTGGGTCAAGATAGCTGG AAGATCGCCGCTGCGCTCATGGGCAGCTACATTGGTGGAGCGGTGAATTACGTCGCAATC TCTGAAGCACTTGGCGTTTCTCCGTCAGTGCTAGCAGCCGGTGTGGCTGCAGACAACATC ATCTCTGCACTCTACTTCATGACCCTCTTCTCGCTGGCAGCCAAGATACCAGCTGAACCT AAAACTGCTCAAGAGGGTAGTAACGGCGGCGAGTCTGAGGGCGGAAGGCGGATGTCGGTG CTCCATGGCGGCGCGGCGGTGGCGCTGTCGTTCGTGATCTGCAAGGCCGGGTCGGCCATC TCCAGCCAGCTGGGAATCCAGGGCGGCACCCTGCCGTGCGTGACGGCGCTGGTGGTGGCG CTGGCGACGGCGTTCCCGCGGCTGCTGGGGAAGCTGGCGCCGTCCGGCGAGACCATCGCG CTGATCCTGATGCAGGTGTTCTTCACGGTGGTGGGCGCCAACGGCAACCTGGTGGACGCG GTGACCAAGGCGCCCAGCGTGTTCGCGTTCGCGCTGGTGCAAGTGACCATCCACCTAGGC ATCGTGCTCGCCGCAGGGAAGCTGATGGGGTTCGAGCGGAAGCCGCTGCTGATCGCGTCC AACGCCAACGTGGGCGGGCCGACGACGGCGGCGGCCATGGCGACGGCCAAGGGGTGGAGC TCGCTGATCGTGCCGGGCATCCTGGTGGGCATGTTCGGGATCTCCATTGCCACGTTTGTT GGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGGCGCCTAA

Peptide Sequence

PEP ID	Os06t0107100-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:454843:457197:1 gene:Os06g0107100 transcript:Os06t0107100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF819 family protein. (Os06t0107100-01);Similar to predicted protein. (Os06t0107100-02)
Sequence	MAPPAPAALLLPSNHSYRPLLPRPILHHATGFACASASPSPPPRLRLRLRHAAPLRAAAL PAIAIAPGDHWGNWAFLLSAAAFGTWSEESTSWGAALSGSLVSTTGDLLKAFLIGSVATT IGTTIAFLLVPMKSLGQDSWKIAAALMGSYIGGAVNYVAISEALGVSPSVLAAGVAADNI ISALYFMTLFSLAAKIPAEPKTAQEGSNGGESEGGRRMSVLHGGAAVALSFVICKAGSAI SSQLGIQGGTLPCVTALVVALATAFPRLLGKLAPSGETIALILMQVFFTVVGANGNLVDA VTKAPSVFAFALVQVTIHLGIVLAAGKLMGFERKPLLIASNANVGGPTTAAAMATAKGWS SLIVPGILVGMFGISIATFVGIGFGMFVLRRICGA

Transcript Sequence

Transcript ID	Os06t0107100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:454843:457197:1 gene:Os06g0107100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF819 family protein. (Os06t0107100-01);Similar to predicted protein. (Os06t0107100-02)
Sequence	ACACTTGGCGCAGACAAAACAACGAGACCGTACAGGTAGAGGTGGTAAAGGTAAACGACG AGAGCTAAAGAAATCTGGCATGGCGCCACCGGCACCGGCCGCTCTCCTCCTCCCCTCCAA CCATTCCTATCGCCCGCTCCTGCCTCGCCCAATCCTGCACCACGCCACCGGCTTCGCCTG CGCCTCGGCCTCGCCCTCGCCGCCCCCTCGCCTTCGCCTTCGCCTTCGGCATGCCGCCCC GCTCCGTGCCGCCGCCCTGCCGGCCATCGCCATCGCCCCCGGCGACCACTGGGGCAACTG GGCCTTCCTCCTCTCCGCCGCCGCCTTCGGCACCTGGTCGGAGGAGTCCACGTCGTGGGG CGCCGCGCTCAGCGGCTCGCTCGTCAGCACCACCGGCGACCTCCTCAAGGCCTTCCTCAT CGGATCAGTTGCAACTACAATTGGCACAACGATAGCCTTTCTGTTGGTTCCTATGAAATC ACTGGGTCAAGATAGCTGGAAGATCGCCGCTGCGCTCATGGGCAGCTACATTGGTGGAGC GGTGAATTACGTCGCAATCTCTGAAGCACTTGGCGTTTCTCCGTCAGTGCTAGCAGCCGG TGTGGCTGCAGACAACATCATCTCTGCACTCTACTTCATGACCCTCTTCTCGCTGGCAGC CAAGATACCAGCTGAACCTAAAACTGCTCAAGAGGGTAGTAACGGCGGCGAGTCTGAGGG CGGAAGGCGGATGTCGGTGCTCCATGGCGGCGCGGCGGTGGCGCTGTCGTTCGTGATCTG CAAGGCCGGGTCGGCCATCTCCAGCCAGCTGGGAATCCAGGGCGGCACCCTGCCGTGCGT GACGGCGCTGGTGGTGGCGCTGGCGACGGCGTTCCCGCGGCTGCTGGGGAAGCTGGCGCC GTCCGGCGAGACCATCGCGCTGATCCTGATGCAGGTGTTCTTCACGGTGGTGGGCGCCAA CGGCAACCTGGTGGACGCGGTGACCAAGGCGCCCAGCGTGTTCGCGTTCGCGCTGGTGCA AGTGACCATCCACCTAGGCATCGTGCTCGCCGCAGGGAAGCTGATGGGGTTCGAGCGGAA GCCGCTGCTGATCGCGTCCAACGCCAACGTGGGCGGGCCGACGACGGCGGCGGCCATGGC GACGGCCAAGGGGTGGAGCTCGCTGATCGTGCCGGGCATCCTGGTGGGCATGTTCGGGAT CTCCATTGCCACGTTTGTTGGCATCGGGTTCGGCATGTTTGTGCTCAGGAGGATCTGCGG CGCCTAACCAATCTATAGTACTAACAATTCAATTGGTTTATATATAGCTGTGATCAATAA ATAATAATGGAGGAGTAGTAGCAATGAAGAATCATGCATGCATTTCAATGAAAAGTGTAA ACATTAGAAGAAGAAGAAGAAGAAGAAGAAAATACTGTATTATTTATCAAGAGTAATACT ATTATTATTAG