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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0107000-01
CDS Infomation

cds chromosome:IRGSP-1.0:6:450964:453729:1 gene:Os06g0107000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA163 description:Domain of unknown function DUF862, eukaryotic domain containing protein. (Os06t0107000-01)
Sequence

GGCGAGGAGGAGGAGGGGAGGCAGGTCCAGGAGGTGGTGGCGCACGTGTACGACGTTGCG
AGCAGCGGGTCGTCGGAGGGGGGCGGCGGCGGCACCGCCATCCTCCACGTCAACCGCTTC
TTCAAGGACGCCATCGGCCTCGGCGGCATCTTCCACACCGCCATCCAGGTGTATGGAGAT
GAAGAATGGTCCTTTGGTTACTGTGAAAATGGCACCGGGGTTTTTAGCTGCCCCCCGTGC
AAAAACCCCATGTACACGTACCGTGAGTCCATAGTGCTGGGGAAGACGACCTGCTCTATT
TTCACGGTAAACCAAATACTACGGGAACTGAGCTGGAAATGGCCTGGAGGCTCATATGAA
CTCCTGTCCAGGAACTGCAATCACTTCTGCAATACTTTCTGTGAGAAGCTTGATGTACCA
AAACTTCCAGCTTGGGTCAATCGCTTCGCAAATGCTGGGGATGCTGCTCTAGAGGTAGCT
GAAAATACAGCAGAAAAGCTGAAGCAAGCAAAAAAGGACATTGCGGGTGCATGCAAAGCA
GCCACCACATATTTGACTGGTGCATCTTCAAGTTCACCATCAAATGCAGATGACTCAGGC
GGTTCAACAAATAGTTCTCTTTTTGAGGGGACATGGCTCAGAAGTATCATCGGCATCAGT
ATGAAACCATCAAGGAGTCTCATGTGTTCGGATAGTTCAGATAGTTCAGATGATGAAAAA
TCTGAAGATGAGAGGGAATCAGATTGCCAACAGCCTAGCGGTGATCAAATTGAAGAAAAA
AAGGATGCTACACAAGAGCAAGCAGGAAAGTGA

Peptide Sequence

PEP ID

Os06t0107000-01
PEP Infomation

pep chromosome:IRGSP-1.0:6:450964:453729:1 gene:Os06g0107000 transcript:Os06t0107000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA163 description:Domain of unknown function DUF862, eukaryotic domain containing protein. (Os06t0107000-01)
Sequence

GEEEEGRQVQEVVAHVYDVASSGSSEGGGGGTAILHVNRFFKDAIGLGGIFHTAIQVYGD
EEWSFGYCENGTGVFSCPPCKNPMYTYRESIVLGKTTCSIFTVNQILRELSWKWPGGSYE
LLSRNCNHFCNTFCEKLDVPKLPAWVNRFANAGDAALEVAENTAEKLKQAKKDIAGACKA
ATTYLTGASSSSPSNADDSGGSTNSSLFEGTWLRSIIGISMKPSRSLMCSDSSDSSDDEK
SEDERESDCQQPSGDQIEEKKDATQEQAGK

Transcript Sequence

Transcript ID

Os06t0107000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:450964:453729:1 gene:Os06g0107000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA163 description:Domain of unknown function DUF862, eukaryotic domain containing protein. (Os06t0107000-01)
Sequence

GGCGAGGAGGAGGAGGGGAGGCAGGTCCAGGAGGTGGTGGCGCACGTGTACGACGTTGCG
AGCAGCGGGTCGTCGGAGGGGGGCGGCGGCGGCACCGCCATCCTCCACGTCAACCGCTTC
TTCAAGGACGCCATCGGCCTCGGCGGCATCTTCCACACCGCCATCCAGGTGTATGGAGAT
GAAGAATGGTCCTTTGGTTACTGTGAAAATGGCACCGGGGTTTTTAGCTGCCCCCCGTGC
AAAAACCCCATGTACACGTACCGTGAGTCCATAGTGCTGGGGAAGACGACCTGCTCTATT
TTCACGGTAAACCAAATACTACGGGAACTGAGCTGGAAATGGCCTGGAGGCTCATATGAA
CTCCTGTCCAGGAACTGCAATCACTTCTGCAATACTTTCTGTGAGAAGCTTGATGTACCA
AAACTTCCAGCTTGGGTCAATCGCTTCGCAAATGCTGGGGATGCTGCTCTAGAGGTAGCT
GAAAATACAGCAGAAAAGCTGAAGCAAGCAAAAAAGGACATTGCGGGTGCATGCAAAGCA
GCCACCACATATTTGACTGGTGCATCTTCAAGTTCACCATCAAATGCAGATGACTCAGGC
GGTTCAACAAATAGTTCTCTTTTTGAGGGGACATGGCTCAGAAGTATCATCGGCATCAGT
ATGAAACCATCAAGGAGTCTCATGTGTTCGGATAGTTCAGATAGTTCAGATGATGAAAAA
TCTGAAGATGAGAGGGAATCAGATTGCCAACAGCCTAGCGGTGATCAAATTGAAGAAAAA
AAGGATGCTACACAAGAGCAAGCAGGAAAGTGAGAATAGACCATGCCATCATCCATGAAG
GTCACACCACAATGTACCGAAAGAGGAGCAACATTTCAAGATTGCAATTTGCTGATTAAA
AAAATTTACACAGCGAGCAAGCAATCTACAACAAGAACCTAATTTACACATTGGGTGGCA
TCGACTTGTGATCAAGAACGGGGAGCTGTGACAAAGCCCTGACAAGTGCCGAAGTGATGG
CGCTCATCACAATGCGTGCAATCCTGGACTTTACTTGCCCACGGCGTGGCAGTGGACGAA
CTCTCATTTGCTTTTCGCCCTTGTAGACTTTGATGAGATGAGCAGAGGCAACCTTGCAAG
CTTTCTCGCCCATGTTGGTGAAGGAGATATCAGAAAACTTGTCTGGCACTATGCTTGATC
TCTGTTCCCGTCGTGTACTTATAGGCTAGGAGATGTTGTATCTGAATGGAAGACATGACA
GCTAAACTCTTGTTTCATTGCCGTATTAGCTGAGGGAGCCATTGACTATACCTGAATGAT
GTTGTTTTTTTGTATAATCTTGCAGTGTCTGTTGGTATGAAATGAGATGCTTCTGTTG