Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0106800-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:439066:441465:-1 gene:Os06g0106800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycoside hydrolase, family 28. (Os06t0106800-01);Similar to glycoside hydrolase, family 28. (Os06t0106800-02)
Sequence	ATGGCGTTGCAAACGCAGCCGGTACCAAATGCGTCACCTCTTCATGTTCTTCGGTCCGTA TGCGTCCTCCTCCTGGCCGCGTCGGCGACGGTGGCGGCGCGGCGCCACGGCCCGGCGGCG CCCATCGCCGGGCAGAGCATGTACCTGGCGCCGAGCTGCCGCGCGCACACGGCGTCGCTG ACGGACTTCGGCGGCGTGGGCGACGGCACGACGTCGAACACGGCGGCTTTCAAGTCGGCG GTGGACCACCTGTCGCAGTACTCCGGCGAGGGCGGCGGCGGGGCGATGCTGTACGTGCCG GCGGGGAAGTGGCTCACTGGGCCGTTCAACCTGACGAGCCACTTCACCCTGTTCCTCCAC AGCGACGCCGTCATCCTGGGGTCCCAGGACATGGGCGAGTGGCCCATCATCGATCCCCTC CCGTCGTACGGCCGCGGCCGCGACAAGGCCGGCGGCCGGTACGCGAGCCTGATCGGCGGG TCCAACCTGACGGACGTGGTGATCACCGGCGCGAACGGGACGATCGACGGGCAGGGGGCG ATGTGGTGGTCCAAGTTCCATTCGAACAAGCTCAAGTACACGCGTGGGTACCTGATCGAG GTGATGCACTCGGACACGGTGGTGATATCGAACGTGACGCTGGTGAACTCGCCGGCGTGG AACATCCACCCGGTGTACAGCAGCAACATCGTGGTGCAGGGGGTGACGATCCTGGCACCG ACGCACTCGCCCAACACCGACGGCATCAACCCGGACTCGTGCTCCCACGTCCGCATCGAG GACTGCTACATCGTGTCCGGCGACGACTGCGTGGCGATCAAGTCCGGGTGGGACGAGTAC GGGATCGCGTACGGGATGCCCAGCCAGCACATCGTGGTGCGGAGGCTGACGTGCGTGTCG CCGACGAGCGCGGTGATCGCGCTGGGCAGCGAGATGTCGGGCGGGATCAGCGACGTGCGG GCGGAGGACATAACGGCGGTGAACTCGGAGTCGGCGGTGCGGATCAAGACGGCGGTGGGG CGTGGGGCGTACGTGCGCGACGTGTTCGTCCGGGGGATGTCGCTGGACACCATGAAGTGG GTGTTCTGGATGACGGGGAACTACAAGTCCCACCCGGACGACGGCTACGACCCCAACGCC ATCCCCGTCGTGGACAACATCAGCTACCAGGACGTGGTGGCCACGGGGGTGTACAAGGAG GCCGCCAGGCTGGAGGGCATCCAGGGCGCCCCCTTCCGCGGCATCTGCATCGCCAACGTC ACCGCCACGCTCTCCAAGTCGCGCAAGTACCCGTGGACCTGCACCGACATCGAGGGGGTG TCCACCGGCGTCACGCCGGCGCCGTGCCAGCCGCTGCAGGGGGCGCACGATGGCGCCTGC CCGTTCCCCACGGACACGCTGCCCATCGACCAGCTCGTCATGCAGCAGTGCGCCTACTCC GTCCCGGCCTCCATCTAG

Peptide Sequence

PEP ID	Os06t0106800-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:439066:441465:-1 gene:Os06g0106800 transcript:Os06t0106800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycoside hydrolase, family 28. (Os06t0106800-01);Similar to glycoside hydrolase, family 28. (Os06t0106800-02)
Sequence	MALQTQPVPNASPLHVLRSVCVLLLAASATVAARRHGPAAPIAGQSMYLAPSCRAHTASL TDFGGVGDGTTSNTAAFKSAVDHLSQYSGEGGGGAMLYVPAGKWLTGPFNLTSHFTLFLH SDAVILGSQDMGEWPIIDPLPSYGRGRDKAGGRYASLIGGSNLTDVVITGANGTIDGQGA MWWSKFHSNKLKYTRGYLIEVMHSDTVVISNVTLVNSPAWNIHPVYSSNIVVQGVTILAP THSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGIAYGMPSQHIVVRRLTCVS PTSAVIALGSEMSGGISDVRAEDITAVNSESAVRIKTAVGRGAYVRDVFVRGMSLDTMKW VFWMTGNYKSHPDDGYDPNAIPVVDNISYQDVVATGVYKEAARLEGIQGAPFRGICIANV TATLSKSRKYPWTCTDIEGVSTGVTPAPCQPLQGAHDGACPFPTDTLPIDQLVMQQCAYS VPASI

Transcript Sequence

Transcript ID	Os06t0106800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:439066:441465:-1 gene:Os06g0106800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to glycoside hydrolase, family 28. (Os06t0106800-01);Similar to glycoside hydrolase, family 28. (Os06t0106800-02)
Sequence	ATCCAATCCACCCCACTCCATTCTCTCATCTCATCCGTGACCACACTCCACTCTCATCCA GAGCAATGGCGTTGCAAACGCAGCCGGTACCAAATGCGTCACCTCTTCATGTTCTTCGGT CCGTATGCGTCCTCCTCCTGGCCGCGTCGGCGACGGTGGCGGCGCGGCGCCACGGCCCGG CGGCGCCCATCGCCGGGCAGAGCATGTACCTGGCGCCGAGCTGCCGCGCGCACACGGCGT CGCTGACGGACTTCGGCGGCGTGGGCGACGGCACGACGTCGAACACGGCGGCTTTCAAGT CGGCGGTGGACCACCTGTCGCAGTACTCCGGCGAGGGCGGCGGCGGGGCGATGCTGTACG TGCCGGCGGGGAAGTGGCTCACTGGGCCGTTCAACCTGACGAGCCACTTCACCCTGTTCC TCCACAGCGACGCCGTCATCCTGGGGTCCCAGGACATGGGCGAGTGGCCCATCATCGATC CCCTCCCGTCGTACGGCCGCGGCCGCGACAAGGCCGGCGGCCGGTACGCGAGCCTGATCG GCGGGTCCAACCTGACGGACGTGGTGATCACCGGCGCGAACGGGACGATCGACGGGCAGG GGGCGATGTGGTGGTCCAAGTTCCATTCGAACAAGCTCAAGTACACGCGTGGGTACCTGA TCGAGGTGATGCACTCGGACACGGTGGTGATATCGAACGTGACGCTGGTGAACTCGCCGG CGTGGAACATCCACCCGGTGTACAGCAGCAACATCGTGGTGCAGGGGGTGACGATCCTGG CACCGACGCACTCGCCCAACACCGACGGCATCAACCCGGACTCGTGCTCCCACGTCCGCA TCGAGGACTGCTACATCGTGTCCGGCGACGACTGCGTGGCGATCAAGTCCGGGTGGGACG AGTACGGGATCGCGTACGGGATGCCCAGCCAGCACATCGTGGTGCGGAGGCTGACGTGCG TGTCGCCGACGAGCGCGGTGATCGCGCTGGGCAGCGAGATGTCGGGCGGGATCAGCGACG TGCGGGCGGAGGACATAACGGCGGTGAACTCGGAGTCGGCGGTGCGGATCAAGACGGCGG TGGGGCGTGGGGCGTACGTGCGCGACGTGTTCGTCCGGGGGATGTCGCTGGACACCATGA AGTGGGTGTTCTGGATGACGGGGAACTACAAGTCCCACCCGGACGACGGCTACGACCCCA ACGCCATCCCCGTCGTGGACAACATCAGCTACCAGGACGTGGTGGCCACGGGGGTGTACA AGGAGGCCGCCAGGCTGGAGGGCATCCAGGGCGCCCCCTTCCGCGGCATCTGCATCGCCA ACGTCACCGCCACGCTCTCCAAGTCGCGCAAGTACCCGTGGACCTGCACCGACATCGAGG GGGTGTCCACCGGCGTCACGCCGGCGCCGTGCCAGCCGCTGCAGGGGGCGCACGATGGCG CCTGCCCGTTCCCCACGGACACGCTGCCCATCGACCAGCTCGTCATGCAGCAGTGCGCCT ACTCCGTCCCGGCCTCCATCTAGCTGATCTGGCTGCAGCCTGCAGCGCTGTAGCTGTAGC TGTGACCGTCGTTACTACTACAACACTAGCCTCTGCGTGCGGTCTTCTGAAACAAAAACA ATAACCCAGAGTGACCTTTCTGACTGTGCTGCTTCACAGCGCTCGCTCTGCGTCATGTCA GTGCTGCCTCTCCTTGCTCTGCAATTATGTAACTTAAACTTCAGTTCGTGAAATACAAAT GAGAAATTAGTCG