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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os06t0106000-02
CDS Infomation

cds chromosome:IRGSP-1.0:6:411036:413035:1 gene:Os06g0106000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cobyrinic acid a,c-diamide synthase domain containing protein. (Os06t0106000-01);Cobyrinic acid a,c-diamide synthase domain containing protein. (Os06t0106000-02)
Sequence

ATGGCGTTCGCCCCGCGCCTCCTCCTACCTTCCCGGTGCCCCCCGCCGGCCTCCTCCCCC
GCGCGCCACGGCGGCCGCACCGCGCCTGAGCTGTCCGGTCCCACCCCGCGCGTGGTGGTG
GTCACCTCCGGCAAGGGCGGCGTGGGTAAGACCACCACCACGGCCAATCTCGCCGCCTCC
CTCGCACGCCTCTCCCTCTCCGCCGTCGCCGTCGACGCCGACGCGGGCCTGCGCAATCTG
GACCTCCTCCTCGGCCTCGAGAACCGCGTCCACCTCACCGCCGCCGACGTGCTCGCTGGG
GACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCGCGCGCTCCATGACCTGCAGCTGCTC
TGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGCCTTCGGCTCCAAGACCCTCACCTGG
GTCGCTGACGCGCTTCGCCGCGCCGCCAACCCACCCGCTTTCATCCTCATCGACTGCCCT
GCAGGTGTTGATGCAGGGTTTGTCACTGCTATTGCCCCTGCAGAAGAGGCCGTGCTTGTT
ACTACCCCTGACATTACGGCTCTCCGTGATGCTGACCGTGTTGCAGGGCTATTGGAGTGT
GACGGCATCAAAGACATTAAGATTATTGTCAACCGAGTACGCCCAGACCTGGTGAAGGGA
GAGGATATGATGTCAGCACTTGATGTTCAAGAAATGCTTGGCTTGCCTTTGCTAGGTGTT
GTGCCAGAGGACGCGGAGGTGATCCGGAGTACAAATAGAGGTGTGCCGTTGGTTCTGAAC
GACCCACCCACACCAGCTGGTCTTGCTCTGGAGCAGGCGACTTGGCGGTTGGTGGAAAGA
GATGCAATGACAGCAGTTATGGTAGAGGAGCAGGAGAGGCCCAAGAAGAAAGCTGGGTTC
TTTTCATTCTTTGGTGGGTAA

Peptide Sequence

PEP ID

Os06t0106000-02
PEP Infomation

pep chromosome:IRGSP-1.0:6:411036:413035:1 gene:Os06g0106000 transcript:Os06t0106000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cobyrinic acid a,c-diamide synthase domain containing protein. (Os06t0106000-01);Cobyrinic acid a,c-diamide synthase domain containing protein. (Os06t0106000-02)
Sequence

MAFAPRLLLPSRCPPPASSPARHGGRTAPELSGPTPRVVVVTSGKGGVGKTTTTANLAAS
LARLSLSAVAVDADAGLRNLDLLLGLENRVHLTAADVLAGDCRLDQALVRHRALHDLQLL
CLSKPRSKLPLAFGSKTLTWVADALRRAANPPAFILIDCPAGVDAGFVTAIAPAEEAVLV
TTPDITALRDADRVAGLLECDGIKDIKIIVNRVRPDLVKGEDMMSALDVQEMLGLPLLGV
VPEDAEVIRSTNRGVPLVLNDPPTPAGLALEQATWRLVERDAMTAVMVEEQERPKKKAGF
FSFFGG

Transcript Sequence

Transcript ID

Os06t0106000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:6:411036:413035:1 gene:Os06g0106000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cobyrinic acid a,c-diamide synthase domain containing protein. (Os06t0106000-01);Cobyrinic acid a,c-diamide synthase domain containing protein. (Os06t0106000-02)
Sequence

AACCCCAACCCTAACCCTAACTCCAATGGCGTTCGCCCCGCGCCTCCTCCTACCTTCCCG
GTGCCCCCCGCCGGCCTCCTCCCCCGCGCGCCACGGCGGCCGCACCGCGCCTGAGCTGTC
CGGTCCCACCCCGCGCGTGGTGGTGGTCACCTCCGGCAAGGGCGGCGTGGGTAAGACCAC
CACCACGGCCAATCTCGCCGCCTCCCTCGCACGCCTCTCCCTCTCCGCCGTCGCCGTCGA
CGCCGACGCGGGCCTGCGCAATCTGGACCTCCTCCTCGGCCTCGAGAACCGCGTCCACCT
CACCGCCGCCGACGTGCTCGCTGGGGACTGCCGCCTCGACCAGGCCCTCGTCCGCCACCG
CGCGCTCCATGACCTGCAGCTGCTCTGCCTCTCCAAGCCCCGCTCCAAGCTGCCCCTCGC
CTTCGGCTCCAAGACCCTCACCTGGGTCGCTGACGCGCTTCGCCGCGCCGCCAACCCACC
CGCTTTCATCCTCATCGACTGCCCTGCAGGTGTTGATGCAGGGTTTGTCACTGCTATTGC
CCCTGCAGAAGAGGCCGTGCTTGTTACTACCCCTGACATTACGGCTCTCCGTGATGCTGA
CCGTGTTGCAGGGCTATTGGAGTGTGACGGCATCAAAGACATTAAGATTATTGTCAACCG
AGTACGCCCAGACCTGGTGAAGGGAGAGGATATGATGTCAGCACTTGATGTTCAAGAAAT
GCTTGGCTTGCCTTTGCTAGGTGTTGTGCCAGAGGACGCGGAGGTGATCCGGAGTACAAA
TAGAGGTGTGCCGTTGGTTCTGAACGACCCACCCACACCAGCTGGTCTTGCTCTGGAGCA
GGCGACTTGGCGGTTGGTGGAAAGAGATGCAATGACAGCAGTTATGGTAGAGGAGCAGGA
GAGGCCCAAGAAGAAAGCTGGGTTCTTTTCATTCTTTGGTGGGTAATTTGCTGTGAGATT
AATGAGCTCAGTGTAGGCAGTGTGTACAGATTTGCGTTTTGGAGCTACGATTGTTTTTCC
CATTTCTTTTGCTTTGTTATAGTGTAGAATGATTCATCCGTTGTGCTTAAATCCATAGAC
TGGAGTATTTTGCCTTGTTTGCTCAGTACATAAGTAATTTACGAAGATATGTTTTGGTGC
TTCT