Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0104900-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:347009:348516:-1 gene:Os06g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B) (Fragment). (Os06t0104900-01)
Sequence	ATGAAGAAGGCGTCGTCGCTGTCTGAGCTGGGGTTCGACGCCGATGGCCCGTCATTCTTC CGGCACCTGACGCTGACCGATGGCGACGACGGCACGCTGCCCCGGCGGCGGCTGATCAAG ATCTCGGTGATCGGCGCGGGCAACGTGGGCATGGCCATCGCGCAGACGATCCTGACGCAG GACCTCGCCGACGAGATCGTGCTGATCGACGCGGTGGCGGACAAGGTGCGGGGCGAGATG CTGGACCTGCAGCACGCGGCGGCGTTCCTCCCCCGCGTGAACATCGTGTCCGGCACGGAG GTGTCGCTGACGAGGAGCTCGGACCTGGTGATCGTGACGGCGGGGGCTCGGCAGATCCCG GGGGAGACGCGGCTGAACCTGCTGCAGCGGAACGTGTCGCTGTTCCGGAAGATCGTGCCG GCGGCGGCGGAGGCGTCGCCGGAGTCGGTGCTGGTGATCGTGTCGAACCCGGTGGACGTG CTGACGTACGTGGCGTGGAAGCTGTCGGGGTTCCCGGCGAGCAGGGTGATCGGGTCGGGG ACGAACCTGGACTCGTCTCGGTTCAGGTTCCTCCTCGCCGAGCACCTGGAGGTGAGCGCG CAGGACGTGCAGGCGTACATGGTGGGGGAGCACGGGGACAGCTCGGTGGCGCTGTGGTCG AGCATCAGCGTGGGGGGGATGCCGGTGCTGGCGCACCTGCAGAAGAACCACCGGTCGGCG GCGACGGCGAAGAAGTTCGACGAGGCGGCGCTGGAGGGGATCCGGCGGGCGGTGGTGGGG AGCGCGTACGAGGTGATCAAGCTCAAGGGGTACACGTCGTGGGCCATCGGCTACTCCGTC GCCAGCATCGCCTGGTCGCTGCTCCGTGACCAGCGCCGCATCCACCCGGTCTCCGTCCTC GCCAAGGGCCTTGTCCGTGGCGTCCCCGCCGACCGCGAGCTCTTCCTCAGCCTGCCCGCT CGCCTCGGCCGCGCCGGCGTGCTTGGCGTCGCCGCCGAGCTGGTGCTCACCGACGAGGAG GAGAGGAGGCTTCGCATCTCCGCCGAAACCCTCTGGGGATACTGCCACGCCCTCGGCCTC TAA

Peptide Sequence

PEP ID	Os06t0104900-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:347009:348516:-1 gene:Os06g0104900 transcript:Os06t0104900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B) (Fragment). (Os06t0104900-01)
Sequence	MKKASSLSELGFDADGPSFFRHLTLTDGDDGTLPRRRLIKISVIGAGNVGMAIAQTILTQ DLADEIVLIDAVADKVRGEMLDLQHAAAFLPRVNIVSGTEVSLTRSSDLVIVTAGARQIP GETRLNLLQRNVSLFRKIVPAAAEASPESVLVIVSNPVDVLTYVAWKLSGFPASRVIGSG TNLDSSRFRFLLAEHLEVSAQDVQAYMVGEHGDSSVALWSSISVGGMPVLAHLQKNHRSA ATAKKFDEAALEGIRRAVVGSAYEVIKLKGYTSWAIGYSVASIAWSLLRDQRRIHPVSVL AKGLVRGVPADRELFLSLPARLGRAGVLGVAAELVLTDEEERRLRISAETLWGYCHALGL

Transcript Sequence

Transcript ID	Os06t0104900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:347009:348516:-1 gene:Os06g0104900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to L-lactate dehydrogenase B (EC 1.1.1.27) (LDH-B) (Fragment). (Os06t0104900-01)
Sequence	GTATAGCAAAAACACATTTCCAACATTCGGTCTTCACTACTAGCTAGTAGTGTTTTTTTC CTACATATATAAACAATAATTATTCATTGACAGGCATCAAGCTAGCTAGCTAGCCAACTG TCTGCAAGAAGAAGAAGAAGAAGAAGGTGCAGGATAAATCGATGAAGAAGGCGTCGTCGC TGTCTGAGCTGGGGTTCGACGCCGATGGCCCGTCATTCTTCCGGCACCTGACGCTGACCG ATGGCGACGACGGCACGCTGCCCCGGCGGCGGCTGATCAAGATCTCGGTGATCGGCGCGG GCAACGTGGGCATGGCCATCGCGCAGACGATCCTGACGCAGGACCTCGCCGACGAGATCG TGCTGATCGACGCGGTGGCGGACAAGGTGCGGGGCGAGATGCTGGACCTGCAGCACGCGG CGGCGTTCCTCCCCCGCGTGAACATCGTGTCCGGCACGGAGGTGTCGCTGACGAGGAGCT CGGACCTGGTGATCGTGACGGCGGGGGCTCGGCAGATCCCGGGGGAGACGCGGCTGAACC TGCTGCAGCGGAACGTGTCGCTGTTCCGGAAGATCGTGCCGGCGGCGGCGGAGGCGTCGC CGGAGTCGGTGCTGGTGATCGTGTCGAACCCGGTGGACGTGCTGACGTACGTGGCGTGGA AGCTGTCGGGGTTCCCGGCGAGCAGGGTGATCGGGTCGGGGACGAACCTGGACTCGTCTC GGTTCAGGTTCCTCCTCGCCGAGCACCTGGAGGTGAGCGCGCAGGACGTGCAGGCGTACA TGGTGGGGGAGCACGGGGACAGCTCGGTGGCGCTGTGGTCGAGCATCAGCGTGGGGGGGA TGCCGGTGCTGGCGCACCTGCAGAAGAACCACCGGTCGGCGGCGACGGCGAAGAAGTTCG ACGAGGCGGCGCTGGAGGGGATCCGGCGGGCGGTGGTGGGGAGCGCGTACGAGGTGATCA AGCTCAAGGGGTACACGTCGTGGGCCATCGGCTACTCCGTCGCCAGCATCGCCTGGTCGC TGCTCCGTGACCAGCGCCGCATCCACCCGGTCTCCGTCCTCGCCAAGGGCCTTGTCCGTG GCGTCCCCGCCGACCGCGAGCTCTTCCTCAGCCTGCCCGCTCGCCTCGGCCGCGCCGGCG TGCTTGGCGTCGCCGCCGAGCTGGTGCTCACCGACGAGGAGGAGAGGAGGCTTCGCATCT CCGCCGAAACCCTCTGGGGATACTGCCACGCCCTCGGCCTCTAAATTCATTAATTACTAC GCCAACCCGTTTATATATGCCCATATATATATGATTAATAATCGTCGTGCTAATGCCTAT CGATCGATATTATGCATCATCGTATATGTCGGTCGATCGAAGCTTAATTTCATGGCCGCC CGGGTTGTAATAAGCTACTATTCTCATTGTGTGATTAATTAGCTCTATTTCTCTGATTGA GCTAATTATGTGTAACTGTATACACATTGTGTTCAAACAATAATGGAATGAATAAAATTG ATTGAGAC