Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0103600-01
CDS Infomation	cds chromosome:IRGSP-1.0:6:233787:244624:1 gene:Os06g0103600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aminoacyl-t-RNA synthetase precursor. (Os06t0103600-01);Hypothetical conserved gene. (Os06t0103600-02)
Sequence	ATGGCGGGTTTGGCTCCCCCTCCCCTCCTCCTCCTCCCCCTCTCCTCCTCACTCTCTCCT GCCGCCGCCTCCCACCACCCAACCTCCCCCCCTTCTCGCACACGCCGACGACGCCGCCTG CTATCCGCCGTGGCGTCTGCCGACGGTGATGCTCCCTCCCCAGTCTCTGTCTCCGCCTCC GCCGCCACCAAGGGGCCTTCCTCCTCCTCCGTGCTCACCTTCCAGCAGGCCATCCAGCGC CTCCAGGACTACTGGGCCTCAGTGGGGTGTGCCGTCATGCAGTGCAGCAATACAGAGGTT GGAGCAGGGACCATGAATCCCTTGACATTCCTCAGGGTTTTAGGCCCCGAGCCATGGAAC GTTGCTTATGTGGAGCCAAGTATAAGACCCGACGACAGCCGCTATGGGGACAATCCTAAT AGGCTTCAGCGTCATACTCAATTTCAGGTAATTTTGAAGCCTGACCCTGGAAATTCACAA GACCTCTTTCTGCACAGCCTTTCAGCACTAGGTATCAATGTCCGTGAACATGACATCCGT TTTGTTGAAGACAACTGGGAGAGTCCAGTTCTTGGTGCGTGGGGATTAGGCTGGGAGGTT TGGATGGATGGCATGGAAATAACACAGTTCACATATTTTCAGCAGTCAGGAAGCCTTCCA TTGCTGCCTGTTTCTGTTGAGATAACATATGGACTTGAACGCATCCTCATGTCTCTTCAG GGTGTAGATCATTTCAAGAATATACAATACACTAAAGGAATTACATATGGAGAACTATTC CTTGAGAATGAGAAAGAGATGAGTGCATATTATTTGGAGCATGCAAATGTTGATAACATT CAAAAGCATTTTGATGATTTTGAAGAAGAGGCTCGCTCTTTATTATCACTTTGGCTTCCT ATTCCTGCGTACGATCATGTTCTGAAGGCCTCTCATGCTTTTAATATTTTAGATTCTAGA GGCTTTGTTGGTGTAACCGAGCGTGCAAGATATTTTGGTCGCATGCGGAGTCTTGCTCGC CAGTGTGCTCAGCTTTGGGTGAAAACAAGAGAGAACCTCGGTTATCCTTTGGGCACTTAT CAAGAGTCTAATCTTATCTATCCTCATGTCTCTGAAAAGCCTAGTAGAAAGGGAGTTGTC GGACAGCCACGAGCATTTGTTCTTGAAATAGGAACAGAAGAGTTGCCACCTCATGATGTG ATAGAAGCAACCAAACAGCTGGAGAAATCTTTAATTCAAATATTGGAGAAACGAAGACTG AGCCATGGGAAAGTACGCTCTTATGGGACACCAAGGAGATTAGCGGTTGTTGTTGAAAAT CTTAATATGAAGCAAATGGAGGAAGAGATTGAACTACGTGGTCCACCTGTTGCAAAGGCA TTTGACCAAGAAGGAAGACCCACTAAGGCTGCTGAAGGATTTTGTCGAAAGAATAATGTC CTGATAGATAGTCTATATAGAAGAACTGATGGTAAAACAGAATATATCTACGCTCGGGTC AAAGAGTCTGCACGTTTTGCTGATGAGGTACTAACTGAAGATCTACCGACTATTATATCT GGTATTTCATTTCCCAAGTCTATGCGCTGGAACTCCAATATTGTGTTTAGCAGGCCAATA CGCTGGATCTTTGCCCTTCATGGGGATCTCATTGTGCCATTTTGCTTTGCTGGCATATCA AGTGGGAATCAGTCGTGTGGCCTTCGTAACTCCTCCTTGGCTAACTTTAAGGTGGAAGCT GCAGAATTATATTTACACACCCTGGAGAAAGCTGGGATCCTGATTGATATGCAGGAGCGC AAACAACGAATCTTGCATGACTCTAGTATATTGGCTGAGGGTGTTGGCGGTGATATCATT GCACCTGATAGCTTGGTGCAGGAGGTTATCAATCTTGTGGAGGCGCCGATGCCCATTATT GGTCGATACGATGTTTCCTTCTTAGCACTTCCAAAGGATGTATTAATAACGGTTATGCAG AAACACCAGAAATATTTCCCTGTAACCTCCAAGACCATGGGCAATCTGCTACCATGTTTC ATAACTGTTGCCAATGGTGCCATTAAGGAAGAAGTAGTCCGCAAAGGGAATGAAGCTGTA CTCAGGGCACGGTATGAGGATGCTAAATTCTTTTATAAGATGGATACGCAGAAGAAACTT TCTGAATTCCGAGATCAGCTCAGCAGCATTCTCTTTCATGAAAGACTTGGTACCATGCTT GACAAAATGAAACGTGTTGAGAACACTGTTGCAGAAGTGGCCCTCCTTCTCGGAATTAAT GAGAAAATGATCCCAGCAATCAAAGATGCAGCTGCATTGGCTATGTCAGATCTTGCCACT AATATTGTTACTGAATTTACTTCACTTGCTGGAATTATGGCACGGCATTATGCTTTGAGA GATGGCCTTTCAGAACAGATTGCAGAAGCCCTATTTGAGATAACACTTCCAAGGTTCTCT GGTGATGTGTTCCCAAAAACAGATCCTGGCATAGTCCTTGCAGTCACTGACAGATTGGAT AGTCTAGTGGGTCTGTTTGGAGCTGGATGCCAACCAAGTTCTACAAATGATCCATTTGGG CTAAGGAGAATTTCCTATGGATTGGTTCAAATATTGGTTGAGAACAAGAAGAACTTTGAC CTCACGAAGGCCTTGACCTTAGTGGCAGAGGAGCAGCCAATAACAATAGATAGTGGTGTT ATAGATGAGGTAGTACAATTTGTCACGCGGAGATTGGAGCAACTTTTGGTGGATGAAGGA ATTAATTGCGAGATAGTCCGTTCAGTGCTTATAGAGCGTGCAAACTGCCCTTATCTAGCA TCACAAACAGCAATTGAAATGGAAGCATTTTCAAGAACTGAAGATTTCCCAAAAATTGTC GAAGCGTACTCAAGGCCCGCGAGAATAATACGTGGAAAAGAAATTGGGTCTGCTTTAGAG GTTGATGCAAGTGTATTTGAGAAAGACGAAGAAAGAGCTTTGTGGAGTGCCTACTTGGAG GTTGCGGATAAGATTCATCCTGGTGTTGACATAAAAGCCTTTGCGGACGCTTCTCTGGAA CTGCTGCAACCCCTAGAAGATTTCTTTACAAATGTTTTTGTCATGGCGGAAGACGAGAGA GTTCGTAACAATCGGCTTGCACTGCTAACGAAGGTTGCGAGTCTGCCAAAGGGAATTGCC GACCTGTCAGTTTTACCAGGGTTTTAG

Peptide Sequence

PEP ID	Os06t0103600-01
PEP Infomation	pep chromosome:IRGSP-1.0:6:233787:244624:1 gene:Os06g0103600 transcript:Os06t0103600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aminoacyl-t-RNA synthetase precursor. (Os06t0103600-01);Hypothetical conserved gene. (Os06t0103600-02)
Sequence	MAGLAPPPLLLLPLSSSLSPAAASHHPTSPPSRTRRRRRLLSAVASADGDAPSPVSVSAS AATKGPSSSSVLTFQQAIQRLQDYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWN VAYVEPSIRPDDSRYGDNPNRLQRHTQFQVILKPDPGNSQDLFLHSLSALGINVREHDIR FVEDNWESPVLGAWGLGWEVWMDGMEITQFTYFQQSGSLPLLPVSVEITYGLERILMSLQ GVDHFKNIQYTKGITYGELFLENEKEMSAYYLEHANVDNIQKHFDDFEEEARSLLSLWLP IPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVKTRENLGYPLGTY QESNLIYPHVSEKPSRKGVVGQPRAFVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRL SHGKVRSYGTPRRLAVVVENLNMKQMEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNV LIDSLYRRTDGKTEYIYARVKESARFADEVLTEDLPTIISGISFPKSMRWNSNIVFSRPI RWIFALHGDLIVPFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQER KQRILHDSSILAEGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQ KHQKYFPVTSKTMGNLLPCFITVANGAIKEEVVRKGNEAVLRARYEDAKFFYKMDTQKKL SEFRDQLSSILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIKDAAALAMSDLAT NIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTDPGIVLAVTDRLD SLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLVAEEQPITIDSGV IDEVVQFVTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEMEAFSRTEDFPKIV EAYSRPARIIRGKEIGSALEVDASVFEKDEERALWSAYLEVADKIHPGVDIKAFADASLE LLQPLEDFFTNVFVMAEDERVRNNRLALLTKVASLPKGIADLSVLPGF

Transcript Sequence

Transcript ID	Os06t0103600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:233787:244624:1 gene:Os06g0103600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Aminoacyl-t-RNA synthetase precursor. (Os06t0103600-01);Hypothetical conserved gene. (Os06t0103600-02)
Sequence	GGAGTCCGTCCAGGTCCAGGTCCAGTGTAGTCGTAGCCATGGCGGGTTTGGCTCCCCCTC CCCTCCTCCTCCTCCCCCTCTCCTCCTCACTCTCTCCTGCCGCCGCCTCCCACCACCCAA CCTCCCCCCCTTCTCGCACACGCCGACGACGCCGCCTGCTATCCGCCGTGGCGTCTGCCG ACGGTGATGCTCCCTCCCCAGTCTCTGTCTCCGCCTCCGCCGCCACCAAGGGGCCTTCCT CCTCCTCCGTGCTCACCTTCCAGCAGGCCATCCAGCGCCTCCAGGACTACTGGGCCTCAG TGGGGTGTGCCGTCATGCAGTGCAGCAATACAGAGGTTGGAGCAGGGACCATGAATCCCT TGACATTCCTCAGGGTTTTAGGCCCCGAGCCATGGAACGTTGCTTATGTGGAGCCAAGTA TAAGACCCGACGACAGCCGCTATGGGGACAATCCTAATAGGCTTCAGCGTCATACTCAAT TTCAGGTAATTTTGAAGCCTGACCCTGGAAATTCACAAGACCTCTTTCTGCACAGCCTTT CAGCACTAGGTATCAATGTCCGTGAACATGACATCCGTTTTGTTGAAGACAACTGGGAGA GTCCAGTTCTTGGTGCGTGGGGATTAGGCTGGGAGGTTTGGATGGATGGCATGGAAATAA CACAGTTCACATATTTTCAGCAGTCAGGAAGCCTTCCATTGCTGCCTGTTTCTGTTGAGA TAACATATGGACTTGAACGCATCCTCATGTCTCTTCAGGGTGTAGATCATTTCAAGAATA TACAATACACTAAAGGAATTACATATGGAGAACTATTCCTTGAGAATGAGAAAGAGATGA GTGCATATTATTTGGAGCATGCAAATGTTGATAACATTCAAAAGCATTTTGATGATTTTG AAGAAGAGGCTCGCTCTTTATTATCACTTTGGCTTCCTATTCCTGCGTACGATCATGTTC TGAAGGCCTCTCATGCTTTTAATATTTTAGATTCTAGAGGCTTTGTTGGTGTAACCGAGC GTGCAAGATATTTTGGTCGCATGCGGAGTCTTGCTCGCCAGTGTGCTCAGCTTTGGGTGA AAACAAGAGAGAACCTCGGTTATCCTTTGGGCACTTATCAAGAGTCTAATCTTATCTATC CTCATGTCTCTGAAAAGCCTAGTAGAAAGGGAGTTGTCGGACAGCCACGAGCATTTGTTC TTGAAATAGGAACAGAAGAGTTGCCACCTCATGATGTGATAGAAGCAACCAAACAGCTGG AGAAATCTTTAATTCAAATATTGGAGAAACGAAGACTGAGCCATGGGAAAGTACGCTCTT ATGGGACACCAAGGAGATTAGCGGTTGTTGTTGAAAATCTTAATATGAAGCAAATGGAGG AAGAGATTGAACTACGTGGTCCACCTGTTGCAAAGGCATTTGACCAAGAAGGAAGACCCA CTAAGGCTGCTGAAGGATTTTGTCGAAAGAATAATGTCCTGATAGATAGTCTATATAGAA GAACTGATGGTAAAACAGAATATATCTACGCTCGGGTCAAAGAGTCTGCACGTTTTGCTG ATGAGGTACTAACTGAAGATCTACCGACTATTATATCTGGTATTTCATTTCCCAAGTCTA TGCGCTGGAACTCCAATATTGTGTTTAGCAGGCCAATACGCTGGATCTTTGCCCTTCATG GGGATCTCATTGTGCCATTTTGCTTTGCTGGCATATCAAGTGGGAATCAGTCGTGTGGCC TTCGTAACTCCTCCTTGGCTAACTTTAAGGTGGAAGCTGCAGAATTATATTTACACACCC TGGAGAAAGCTGGGATCCTGATTGATATGCAGGAGCGCAAACAACGAATCTTGCATGACT CTAGTATATTGGCTGAGGGTGTTGGCGGTGATATCATTGCACCTGATAGCTTGGTGCAGG AGGTTATCAATCTTGTGGAGGCGCCGATGCCCATTATTGGTCGATACGATGTTTCCTTCT TAGCACTTCCAAAGGATGTATTAATAACGGTTATGCAGAAACACCAGAAATATTTCCCTG TAACCTCCAAGACCATGGGCAATCTGCTACCATGTTTCATAACTGTTGCCAATGGTGCCA TTAAGGAAGAAGTAGTCCGCAAAGGGAATGAAGCTGTACTCAGGGCACGGTATGAGGATG CTAAATTCTTTTATAAGATGGATACGCAGAAGAAACTTTCTGAATTCCGAGATCAGCTCA GCAGCATTCTCTTTCATGAAAGACTTGGTACCATGCTTGACAAAATGAAACGTGTTGAGA ACACTGTTGCAGAAGTGGCCCTCCTTCTCGGAATTAATGAGAAAATGATCCCAGCAATCA AAGATGCAGCTGCATTGGCTATGTCAGATCTTGCCACTAATATTGTTACTGAATTTACTT CACTTGCTGGAATTATGGCACGGCATTATGCTTTGAGAGATGGCCTTTCAGAACAGATTG CAGAAGCCCTATTTGAGATAACACTTCCAAGGTTCTCTGGTGATGTGTTCCCAAAAACAG ATCCTGGCATAGTCCTTGCAGTCACTGACAGATTGGATAGTCTAGTGGGTCTGTTTGGAG CTGGATGCCAACCAAGTTCTACAAATGATCCATTTGGGCTAAGGAGAATTTCCTATGGAT TGGTTCAAATATTGGTTGAGAACAAGAAGAACTTTGACCTCACGAAGGCCTTGACCTTAG TGGCAGAGGAGCAGCCAATAACAATAGATAGTGGTGTTATAGATGAGGTAGTACAATTTG TCACGCGGAGATTGGAGCAACTTTTGGTGGATGAAGGAATTAATTGCGAGATAGTCCGTT CAGTGCTTATAGAGCGTGCAAACTGCCCTTATCTAGCATCACAAACAGCAATTGAAATGG AAGCATTTTCAAGAACTGAAGATTTCCCAAAAATTGTCGAAGCGTACTCAAGGCCCGCGA GAATAATACGTGGAAAAGAAATTGGGTCTGCTTTAGAGGTTGATGCAAGTGTATTTGAGA AAGACGAAGAAAGAGCTTTGTGGAGTGCCTACTTGGAGGTTGCGGATAAGATTCATCCTG GTGTTGACATAAAAGCCTTTGCGGACGCTTCTCTGGAACTGCTGCAACCCCTAGAAGATT TCTTTACAAATGTTTTTGTCATGGCGGAAGACGAGAGAGTTCGTAACAATCGGCTTGCAC TGCTAACGAAGGTTGCGAGTCTGCCAAAGGGAATTGCCGACCTGTCAGTTTTACCAGGGT TTTAGCCATTTTTTGTTGCTCTTCTAGTTTTATCTGTACCATGCTTGTACATTCATACCG ACTACAGTTTTGCAGCCAAGAAAAGAGCGTGATCCCTATATATATAATGTATAGGTAGCT AGCATAAATTGTCCTCAACTTTGTTGTCCATTGCTATGTTAAACATATGTTTTTGTTTTC AAACCATTTTGGAAATCAAATGCCATAACTTGTATCAGACTATATACCAACTCAAGCGGT ATCTTGCATAAATTCCATTCTATTCCC