Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os06t0103500-02
CDS Infomation	cds chromosome:IRGSP-1.0:6:227908:232614:1 gene:Os06g0103500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) (AOX 1) (Long- chain acyl-CoA oxidase) (AtCX1). (Os06t0103500-01);Similar to Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) (AOX 1) (Long- chain acyl-CoA oxidase) (AtCX1). (Os06t0103500-02);Similar to Acyl-CoA dehydrogenase (Fragment). (Os06t0103500-03);Similar to predicted protein. (Os06t0103500-04)
Sequence	ATGGAGGGCGGCGTAGGGGGGGAGGTGGACCACCTCGCCGGCGAGAGGGCCACCGCGCAG TTCGACGTTGAACACATGAAGGTTGCCTGGGCTGGCTCCCGCCACGCCGTCGATGTCGCC GACCGCATGGCGCGCCTCGTCGCTTCCGACCCCGTGTTCCGCAAGGATAACAGGACTATG CTCCCCAGGAAGGAGCTGTTCAAGGACACACTCAGAAAGGCAGCCCATGCGTGGAAGCGT ATCGTCGAGCTCCGTCTTACAGAAGAGGAGGCAAATTTGCTAAGGCTATACGTGGACCAG CCTGGTTATGTTGATCTGCACTGGGGCATGTTTGTTCCTGCTATAAAAGGCCAAGGGACT GAAGAGCAGCAGAAGAAGTGGCTACCTCTGGCCTACAGGTTCCAAATAATTGGATGCTAT GCTCAGACTGAACTTGGTCATGGTTCCAATGTTCAGGGCCTTGAAACAACCGCCACATTT GACCCAAAGACTGATGAGTTTGTTATACACAGCCCGACACTGACCTCTAGCAAGTGGTGG CCTGGTGGCTTGGGAAAAGCTTCCACTCATGCAGTTGTGTATGCTCGTCTGATAACTGAA GGAAAGGACTACGGCATACATGGTTTCATTGTGCAACTACGAAGCCTAGAGGACCACTCT CCCCTTCCCGGTGTTACTCTTGGTGATATCGGCGGAAAATTTGGTAGTGGTGCATACAAC AGTATGGATAATGGAGTTCTGCGATTTGACCATGTGCGCATCCCAAGGGATCAAATGTTG ATGAGGCTTTCACAAGTTACGAAAGAGGGAAAATATGTGCACTCAGATGTCCCAAAACAG CTGCTTTATGGGACAATGGTTTTTGTTCGTCAAACAATTGTTGCAGATGCTTCTAAGGCT TTATCACGTGCTACTTGCATTGCTGTAAGATACAGCGCTATTCGAAAGCAGTTTGGCCCT CAAACTGGTGGCCCTGAGACTCAGGTCCTCAATTACAAGACTCAGCAAAGCAGACTCTTT CCTTTGCTGGCTTCAGCTTATGCATTTAGGTTTGTGGGTGAGTGGCTGAAGTGGCTGTAC ACGGATGTCACACATAAACTGGAAGCCAAGGATTTCTCAACACTTCAAGAGGCCCATGCC TGTACTGCTGGGTTGAAGGCTGTGACAACATCTGCGACAGCTGATGGAATTGAAGAATGC CGAAAACTCTGTGGTGGACATGGTTACCTGAACAGCAGCGGGCTTCCTGAATTGTTTGCT ATCTATGTTCCTGCTTGCACTTATGAAGGAGACAATGTTGTTTTGCTATTGCAGGTTGCA AGGTTTCTAATGAAGACTGTATCCCAGTTAGCTTCTGGAAAACAGCCTGTTGGTACAACG GCTTACATGGGCAACATACAGTACTTGATGCAATGCAAATGTGGTGTAAATACAGCTGAA GATTGGCTAAATCCTGCTGCCATACGAGAGGTATTTGAAGCTCGGGCTCTCAGGATGGCG GTGAATTGTGCCCAGAACATAAACAAGGCGCCAAGCCAAGAAGAAGGGTTTTATGAGCTA TCCCCTGATCTGCTTGAGGTGGCGGTGGCCCATATCCAGTTGATAATTGTAACCAAGTTC ATAGAGAAATTAGAGCAGGACATCCCTGGTGAGGGAGTGAAGGAGCAACTGTGCATCCTT TGCAATGTGTACGCGCTGTATCTTGTTCACAAGCATCTGGGTGACTTCCTGTCGACGGGG AGCATCACAGCAAGGCAGGGAGCGCTGGCAAACGAGCAGCTGGGAAAGCTGTATGCGCAG GTGCGGCCGAACGCGGTGGCGCTGGTGGACGCGTTCAACTACACCGACCACTACCTGGGG TCGGTGCTGGGGCGCTACGACGGCAATGTTTACCCGGCGCTGTACGAGGAGGCGTGGAAG GACCCCCTCAACGACACGGATGTGCCGGACGGTTACCAGGAGCACCTCCGCCCTCTGCTC AAGCAGCAGCTCAAGCTCTCCAGGCTATGA

Peptide Sequence

PEP ID	Os06t0103500-02
PEP Infomation	pep chromosome:IRGSP-1.0:6:227908:232614:1 gene:Os06g0103500 transcript:Os06t0103500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) (AOX 1) (Long- chain acyl-CoA oxidase) (AtCX1). (Os06t0103500-01);Similar to Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) (AOX 1) (Long- chain acyl-CoA oxidase) (AtCX1). (Os06t0103500-02);Similar to Acyl-CoA dehydrogenase (Fragment). (Os06t0103500-03);Similar to predicted protein. (Os06t0103500-04)
Sequence	MEGGVGGEVDHLAGERATAQFDVEHMKVAWAGSRHAVDVADRMARLVASDPVFRKDNRTM LPRKELFKDTLRKAAHAWKRIVELRLTEEEANLLRLYVDQPGYVDLHWGMFVPAIKGQGT EEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWW PGGLGKASTHAVVYARLITEGKDYGIHGFIVQLRSLEDHSPLPGVTLGDIGGKFGSGAYN SMDNGVLRFDHVRIPRDQMLMRLSQVTKEGKYVHSDVPKQLLYGTMVFVRQTIVADASKA LSRATCIAVRYSAIRKQFGPQTGGPETQVLNYKTQQSRLFPLLASAYAFRFVGEWLKWLY TDVTHKLEAKDFSTLQEAHACTAGLKAVTTSATADGIEECRKLCGGHGYLNSSGLPELFA IYVPACTYEGDNVVLLLQVARFLMKTVSQLASGKQPVGTTAYMGNIQYLMQCKCGVNTAE DWLNPAAIREVFEARALRMAVNCAQNINKAPSQEEGFYELSPDLLEVAVAHIQLIIVTKF IEKLEQDIPGEGVKEQLCILCNVYALYLVHKHLGDFLSTGSITARQGALANEQLGKLYAQ VRPNAVALVDAFNYTDHYLGSVLGRYDGNVYPALYEEAWKDPLNDTDVPDGYQEHLRPLL KQQLKLSRL

Transcript Sequence

Transcript ID	Os06t0103500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:6:227908:232614:1 gene:Os06g0103500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) (AOX 1) (Long- chain acyl-CoA oxidase) (AtCX1). (Os06t0103500-01);Similar to Acyl-coenzyme A oxidase 1, peroxisomal (EC 1.3.3.6) (AOX 1) (Long- chain acyl-CoA oxidase) (AtCX1). (Os06t0103500-02);Similar to Acyl-CoA dehydrogenase (Fragment). (Os06t0103500-03);Similar to predicted protein. (Os06t0103500-04)
Sequence	CTTCTTCCTCCCTGTTCCCTTTTCGATTCGATTGGATTGGATTGTTTTGCTGGCTCGCTC TCTCTCTCTCTCTCGTGGTGTGGTGTGGACAAGAAAGGAAGGAAAGATGGAGGGCGGCGT AGGGGGGGAGGTGGACCACCTCGCCGGCGAGAGGGCCACCGCGCAGTTCGACGTTGAACA CATGAAGGTTGCCTGGGCTGGCTCCCGCCACGCCGTCGATGTCGCCGACCGCATGGCGCG CCTCGTCGCTTCCGACCCCGTGTTCCGCAAGGATAACAGGACTATGCTCCCCAGGAAGGA GCTGTTCAAGGACACACTCAGAAAGGCAGCCCATGCGTGGAAGCGTATCGTCGAGCTCCG TCTTACAGAAGAGGAGGCAAATTTGCTAAGGCTATACGTGGACCAGCCTGGTTATGTTGA TCTGCACTGGGGCATGTTTGTTCCTGCTATAAAAGGCCAAGGGACTGAAGAGCAGCAGAA GAAGTGGCTACCTCTGGCCTACAGGTTCCAAATAATTGGATGCTATGCTCAGACTGAACT TGGTCATGGTTCCAATGTTCAGGGCCTTGAAACAACCGCCACATTTGACCCAAAGACTGA TGAGTTTGTTATACACAGCCCGACACTGACCTCTAGCAAGTGGTGGCCTGGTGGCTTGGG AAAAGCTTCCACTCATGCAGTTGTGTATGCTCGTCTGATAACTGAAGGAAAGGACTACGG CATACATGGTTTCATTGTGCAACTACGAAGCCTAGAGGACCACTCTCCCCTTCCCGGTGT TACTCTTGGTGATATCGGCGGAAAATTTGGTAGTGGTGCATACAACAGTATGGATAATGG AGTTCTGCGATTTGACCATGTGCGCATCCCAAGGGATCAAATGTTGATGAGGCTTTCACA AGTTACGAAAGAGGGAAAATATGTGCACTCAGATGTCCCAAAACAGCTGCTTTATGGGAC AATGGTTTTTGTTCGTCAAACAATTGTTGCAGATGCTTCTAAGGCTTTATCACGTGCTAC TTGCATTGCTGTAAGATACAGCGCTATTCGAAAGCAGTTTGGCCCTCAAACTGGTGGCCC TGAGACTCAGGTCCTCAATTACAAGACTCAGCAAAGCAGACTCTTTCCTTTGCTGGCTTC AGCTTATGCATTTAGGTTTGTGGGTGAGTGGCTGAAGTGGCTGTACACGGATGTCACACA TAAACTGGAAGCCAAGGATTTCTCAACACTTCAAGAGGCCCATGCCTGTACTGCTGGGTT GAAGGCTGTGACAACATCTGCGACAGCTGATGGAATTGAAGAATGCCGAAAACTCTGTGG TGGACATGGTTACCTGAACAGCAGCGGGCTTCCTGAATTGTTTGCTATCTATGTTCCTGC TTGCACTTATGAAGGAGACAATGTTGTTTTGCTATTGCAGGTTGCAAGGTTTCTAATGAA GACTGTATCCCAGTTAGCTTCTGGAAAACAGCCTGTTGGTACAACGGCTTACATGGGCAA CATACAGTACTTGATGCAATGCAAATGTGGTGTAAATACAGCTGAAGATTGGCTAAATCC TGCTGCCATACGAGAGGTATTTGAAGCTCGGGCTCTCAGGATGGCGGTGAATTGTGCCCA GAACATAAACAAGGCGCCAAGCCAAGAAGAAGGGTTTTATGAGCTATCCCCTGATCTGCT TGAGGTGGCGGTGGCCCATATCCAGTTGATAATTGTAACCAAGTTCATAGAGAAATTAGA GCAGGACATCCCTGGTGAGGGAGTGAAGGAGCAACTGTGCATCCTTTGCAATGTGTACGC GCTGTATCTTGTTCACAAGCATCTGGGTGACTTCCTGTCGACGGGGAGCATCACAGCAAG GCAGGGAGCGCTGGCAAACGAGCAGCTGGGAAAGCTGTATGCGCAGGTGCGGCCGAACGC GGTGGCGCTGGTGGACGCGTTCAACTACACCGACCACTACCTGGGGTCGGTGCTGGGGCG CTACGACGGCAATGTTTACCCGGCGCTGTACGAGGAGGCGTGGAAGGACCCCCTCAACGA CACGGATGTGCCGGACGGTTACCAGGAGCACCTCCGCCCTCTGCTCAAGCAGCAGCTCAA GCTCTCCAGGCTATGATCATCCATCCATCATCCTCCCTTTCTTGCTCTATCAATCATATC ATACTGCATACGATTTGAGTAGTAGTAAAATAACACCAGCATATGCAAGGTGCTGGCTGG CTGCTAGTATTTTCTTTTTCTTTATAATTTATTTATTTGGGGAGAGCTGGTATTGTCTTA TTTATTTGGGAAGAGCTGGTATTGTATGTCTGGTGATTTGGTATAGCTGTAACTGTGAAC TTCACCACATCTCCCCCTTCTCAAGGGCATATGCATTCTACTCC