Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0597100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29753515:29756314:-1 gene:Os05g0597100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE DEACETYLASE 1 description:Histone H4 deacetylase, Negative regulation of innate immunity (Os05t0597100-01)
Sequence	ATGGAGTTCTGGGGTCTTGAAGTCAAGCCTGGACAGACTGTCAAATGTGAGCCTGAAGAT GAACGCTTTTTGCACCTTTCTCAGGCTGCTCTTGGGGAATCAAAGAAAGGATCTGACAAT GCAGTAATGTATGTTAAAACTGATGATCAAAAGCTAGTCATTGGAACCCTCTCAGCTGAC AAGTTCCCTCAAATCCAGTTTGATTTGGTCTTTGACAAAGAGTTTGAGCTGTCACACACT TCAAAGACTGCTAGTGTGTTCTTTTCTGGCTACAAAGTTTCCCAGCCGGCTGAGGAAGAT GAAATGGATTTTGATTCTGAAGAAGTTGAAGATGAAGAGGAGGAAGAAAAGATCATTCCA GCTCCCAGGGCAAATGGCAAAGTTGAAGGGAAGGAAAATGAGCAGAAAAAACAAGGCAAG ACAGATTCTTCAGCTTCAAAATCAAAGGCTGCAGTGAATGACGATGATGATGATGATGAC AGTGATGAGGATGATTCTGAGGACGAAGATCTTTCTCCTGAGGATGATGATGATGATTCT TCTGAGGATGATTCCAGCGAAGATGATGAGGATGAGAGTGACGAGGAAGATACTCCCAAG AAGCCAGAGACTGGAAAGAGGAAAGTAGCTGAAATTGTGTTGAAGACACCTTCGTCTGAT AAGAAAGCAAAGATTGCTACACCGTCAGGCCAGAAGACAGGTGACAAGAAGGGTGTCCAT GTAGCAACTCCACATCCGGCAAAGCAGGCTAGCAAGACCCCCGTGAATGACAAGTCAAAG GAGAAGTCCCCAAAATCCGGTGGTGGGTCAATTTCTTGCAAGTCATGCAGCAAGACGTTC AACAGTGAAATGGCTCTGCAATCTCACTCGAAGGCCAAGCACCCCGCCAAGTGA

Peptide Sequence

PEP ID	Os05t0597100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29753515:29756314:-1 gene:Os05g0597100 transcript:Os05t0597100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE DEACETYLASE 1 description:Histone H4 deacetylase, Negative regulation of innate immunity (Os05t0597100-01)
Sequence	MEFWGLEVKPGQTVKCEPEDERFLHLSQAALGESKKGSDNAVMYVKTDDQKLVIGTLSAD KFPQIQFDLVFDKEFELSHTSKTASVFFSGYKVSQPAEEDEMDFDSEEVEDEEEEEKIIP APRANGKVEGKENEQKKQGKTDSSASKSKAAVNDDDDDDDSDEDDSEDEDLSPEDDDDDS SEDDSSEDDEDESDEEDTPKKPETGKRKVAEIVLKTPSSDKKAKIATPSGQKTGDKKGVH VATPHPAKQASKTPVNDKSKEKSPKSGGGSISCKSCSKTFNSEMALQSHSKAKHPAK

Transcript Sequence

Transcript ID	Os05t0597100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29753515:29756314:-1 gene:Os05g0597100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HISTONE DEACETYLASE 1 description:Histone H4 deacetylase, Negative regulation of innate immunity (Os05t0597100-01)
Sequence	AGCCTTAAACCCTAGCTCCGCCTCCCACCTCCCTTTTCTTTTCTAGGGTTCTTCCGCCGC CGCCGCCGCCGCCGCCGATTCCGATGGAGTTCTGGGGTCTTGAAGTCAAGCCTGGACAGA CTGTCAAATGTGAGCCTGAAGATGAACGCTTTTTGCACCTTTCTCAGGCTGCTCTTGGGG AATCAAAGAAAGGATCTGACAATGCAGTAATGTATGTTAAAACTGATGATCAAAAGCTAG TCATTGGAACCCTCTCAGCTGACAAGTTCCCTCAAATCCAGTTTGATTTGGTCTTTGACA AAGAGTTTGAGCTGTCACACACTTCAAAGACTGCTAGTGTGTTCTTTTCTGGCTACAAAG TTTCCCAGCCGGCTGAGGAAGATGAAATGGATTTTGATTCTGAAGAAGTTGAAGATGAAG AGGAGGAAGAAAAGATCATTCCAGCTCCCAGGGCAAATGGCAAAGTTGAAGGGAAGGAAA ATGAGCAGAAAAAACAAGGCAAGACAGATTCTTCAGCTTCAAAATCAAAGGCTGCAGTGA ATGACGATGATGATGATGATGACAGTGATGAGGATGATTCTGAGGACGAAGATCTTTCTC CTGAGGATGATGATGATGATTCTTCTGAGGATGATTCCAGCGAAGATGATGAGGATGAGA GTGACGAGGAAGATACTCCCAAGAAGCCAGAGACTGGAAAGAGGAAAGTAGCTGAAATTG TGTTGAAGACACCTTCGTCTGATAAGAAAGCAAAGATTGCTACACCGTCAGGCCAGAAGA CAGGTGACAAGAAGGGTGTCCATGTAGCAACTCCACATCCGGCAAAGCAGGCTAGCAAGA CCCCCGTGAATGACAAGTCAAAGGAGAAGTCCCCAAAATCCGGTGGTGGGTCAATTTCTT GCAAGTCATGCAGCAAGACGTTCAACAGTGAAATGGCTCTGCAATCTCACTCGAAGGCCA AGCACCCCGCCAAGTGAAGAATGAGACAACGGATGCTGAGCTGAGAAATATTGGTGTCGT TTGAGTTGGTTATCTGAAATGAAATGAAATGCTGCAAACTATTTGGTGTTATGAGTAGTG TCGTGACGGTTTATGTGGTGCAAACTATTTAGTCTAGAAAAAAAAAATCTGTGGTGCGAA CTGAGCTACAATTTTATTCGGTCAAGGTCAGTGGAGTGATTGGTTTATTTTGGATGGAAT TATTGTTCTTCCCTGTTATTCGGTTAATTCCCACGAGAAAGGATTGATAACACCACACTG AATTGACTAGCTGAACAAAGTCG