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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0596200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:29693476:29694622:-1 gene:Os05g0596200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-104-D04, full insert sequence. (Os05t0596200-01);Similar to predicted protein. (Os05t0596200-02);Similar to cDNA clone:001-104-D04, full insert sequence. (Os05t0596200-03)
Sequence

ATGTCGTCCTCCTCCGCCGCCGCCTTAGCCAGAGGCAAATCCGGAATCTCTGCCGCTAAA
TTCGAAGCGTCTAAGGGATTGGGCGCCAAGCCGAAGCGATCCGCCTCCGCCACCGGCAGC
AGAGGGAAGACCGAGAAGAAGGTCTACTCGCTGCCAGGCCAGAAATTCGACCCCCCTGAG
GAGAGAGAGCCTCTCAGGATATTCTACGAGTCCTTATCCAAGCAGATACCCTCCAGTGAG
ATGGCTGAATTCTGGTTGATGGAACACGGGTTGTTATCTCCCGAAAGAGCAAAGAAAGCA
TACG

Peptide Sequence

PEP ID

Os05t0596200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:29693476:29694622:-1 gene:Os05g0596200 transcript:Os05t0596200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-104-D04, full insert sequence. (Os05t0596200-01);Similar to predicted protein. (Os05t0596200-02);Similar to cDNA clone:001-104-D04, full insert sequence. (Os05t0596200-03)
Sequence

MSSSSAAALARGKSGISAAKFEASKGLGAKPKRSASATGSRGKTEKKVYSLPGQKFDPPE
EREPLRIFYESLSKQIPSSEMAEFWLMEHGLLSPERAKKAY

Transcript Sequence

Transcript ID

Os05t0596200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:29693476:29694622:-1 gene:Os05g0596200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-104-D04, full insert sequence. (Os05t0596200-01);Similar to predicted protein. (Os05t0596200-02);Similar to cDNA clone:001-104-D04, full insert sequence. (Os05t0596200-03)
Sequence

TCGGTAGGAAAAATAAAATCTTCCTTCTCGAAATCGCCGGCCGCACCGTCTCCTCTCTCC
CCGGCCGTCGCTGCGCCTCCTCTCTCGCTGGCGCGCCACGCCGCCCCAGCTCCGGTCGTC
GTCCTCCTGGCCCCTCCGCGTCCGCGTCCCCAAGCGAGCGCTCGAGCTTTGCTTTCAAGC
TCTCGCTGAGCTCCGGAGGGTAGAGATGTCGTCCTCCTCCGCCGCCGCCTTAGCCAGAGG
CAAATCCGGAATCTCTGCCGCTAAATTCGAAGCGTCTAAGGGATTGGGCGCCAAGCCGAA
GCGATCCGCCTCCGCCACCGGCAGCAGAGGGAAGACCGAGAAGAAGGTCTACTCGCTGCC
AGGCCAGAAATTCGACCCCCCTGAGGAGAGAGAGCCTCTCAGGATATTCTACGAGTCCTT
ATCCAAGCAGATACCCTCCAGTGAGATGGCTGAATTCTGGTTGATGGAACACGGGTTGTT
ATCTCCCGAAAGAGCAAAGAAAGCATACG