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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0595200-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:29637198:29638221:-1 gene:Os05g0595200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 1-52 description:Allergen V5/Tpx-1 related family protein. (Os05t0595200-01);Similar to allergen V5/Tpx-1-related family protein. (Os05t0595200-02)
Sequence

ATGATGGCCGCATCTGCAGGTCCAGGCGTCGTGGTGGTGGCGCTGGTGGTGGTGGTGTAC
CTCATCTTGTTGATCCGGCCGGCTGCGTCATTTCGCGTCAACGTCGGCGTGGGTATCGGC
GGCGGCATCGGCATCGGCAACCAGAATCAGAACCAGGACCAGAACCAGAACCAGAATCAG
AAGCCGTACTATGATGATAGCAATAACAACAACAATTACGATGAGGGCGAGGGGGAGGGC
GGCGATGATCAGGAGGAGGGTCCGGAGGCGGCGGCGCCGGTGGGGCCGGGGCAGTCGTTC
ACCGGCGGGCGCGGGACGTACAAGTACATGGCGCACGAGTTCCTGGATGCTCACAACAAG
GTGCGCGCCCAGTACGGGCTGCAGCCGCTGAAGTGGAGCAACAAGCTGGCCAGGTACGCG
CGGCGGTGGTCGGCGGCGAGGCGGTTCGACTGCGTGATGATGCACTCGCCGGAGTCGCCG
TACGGGGAGAACGTGTTCTGGGGGACCGGGTGGGGCTGGCGCGCCACGGACGCCGTCAAG
AGCTGGGCCGGCGAGTCCTCCGTCTACGACTGGCGCGGGCAGAGCTGCAACCCGGGGCAG
ATGTGCGGCCACTTCACCCAGATCGTCTGGAACGACACCAAGCTCGTCGGCTGCGGCCGC
TCCGAGTGCGTCGCCGGCGGCGTCTTCATCACCTGCTCCTACGACCCGCCGGGCAACTGG
AAGGGAGAGGTGCCGCTAACCTAA

Peptide Sequence

PEP ID

Os05t0595200-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:29637198:29638221:-1 gene:Os05g0595200 transcript:Os05t0595200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 1-52 description:Allergen V5/Tpx-1 related family protein. (Os05t0595200-01);Similar to allergen V5/Tpx-1-related family protein. (Os05t0595200-02)
Sequence

MMAASAGPGVVVVALVVVVYLILLIRPAASFRVNVGVGIGGGIGIGNQNQNQDQNQNQNQ
KPYYDDSNNNNNYDEGEGEGGDDQEEGPEAAAPVGPGQSFTGGRGTYKYMAHEFLDAHNK
VRAQYGLQPLKWSNKLARYARRWSAARRFDCVMMHSPESPYGENVFWGTGWGWRATDAVK
SWAGESSVYDWRGQSCNPGQMCGHFTQIVWNDTKLVGCGRSECVAGGVFITCSYDPPGNW
KGEVPLT

Transcript Sequence

Transcript ID

Os05t0595200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:29637198:29638221:-1 gene:Os05g0595200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PATHOGENESIS-RELATED GENE 1-52 description:Allergen V5/Tpx-1 related family protein. (Os05t0595200-01);Similar to allergen V5/Tpx-1-related family protein. (Os05t0595200-02)
Sequence

AGCTAGCTAGCTAATAACACATAATATTCCTAGCTAGCTAATTGGTTGCTGCTGATTGCA
TATATATATGTGTATGTAATTAGGAAGCTGAGCTGAGGAGAGGAGAGGAGAGGAGAGTAC
ATACATGATGGCCGCATCTGCAGGTCCAGGCGTCGTGGTGGTGGCGCTGGTGGTGGTGGT
GTACCTCATCTTGTTGATCCGGCCGGCTGCGTCATTTCGCGTCAACGTCGGCGTGGGTAT
CGGCGGCGGCATCGGCATCGGCAACCAGAATCAGAACCAGGACCAGAACCAGAACCAGAA
TCAGAAGCCGTACTATGATGATAGCAATAACAACAACAATTACGATGAGGGCGAGGGGGA
GGGCGGCGATGATCAGGAGGAGGGTCCGGAGGCGGCGGCGCCGGTGGGGCCGGGGCAGTC
GTTCACCGGCGGGCGCGGGACGTACAAGTACATGGCGCACGAGTTCCTGGATGCTCACAA
CAAGGTGCGCGCCCAGTACGGGCTGCAGCCGCTGAAGTGGAGCAACAAGCTGGCCAGGTA
CGCGCGGCGGTGGTCGGCGGCGAGGCGGTTCGACTGCGTGATGATGCACTCGCCGGAGTC
GCCGTACGGGGAGAACGTGTTCTGGGGGACCGGGTGGGGCTGGCGCGCCACGGACGCCGT
CAAGAGCTGGGCCGGCGAGTCCTCCGTCTACGACTGGCGCGGGCAGAGCTGCAACCCGGG
GCAGATGTGCGGCCACTTCACCCAGATCGTCTGGAACGACACCAAGCTCGTCGGCTGCGG
CCGCTCCGAGTGCGTCGCCGGCGGCGTCTTCATCACCTGCTCCTACGACCCGCCGGGCAA
CTGGAAGGGAGAGGTGCCGCTAACCTAACCCATTCCATTCCATTCCTCCACCCACACGCG
TTCCTGCACACTAGCTAGCTACCTGTCATTTCTTCATTTCTTTCTAGCTAGTGCCAGATC
GATTTACTTTTAATTTCCTTCTGGAGTAGCATATATATACGTATTTCAGTTTTTTTTCTT
TTGC