Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0595100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29632006:29635661:1 gene:Os05g0595100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-glucose epimerase 1, UDP-glucose 4-epimerase 1 description:Uridine-diphospho-(UDP)-glucose 4-epimerase, Cell wall carbohydrate partitioning during nitrogen (N) limitation (Os05t0595100-01)
Sequence	ATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGC CACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGAC AACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAAC CTCGACTTCCGCAAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCT CAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAG AAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATG GCCGCACATGGCTGCACCAAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCC AAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACA AAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATC ATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGAC CCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGG CCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTTCGTGAC TATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAA GATTCTGATAGAATAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTG CTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGAAAATCCCGCTTGTATTTGCT GGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAA CTGAAATGGAAGGCAAAATACGGGGTAGAGGAGATGTGCAGGGACCTGTGGAATTGGGCG AGCAAGAACCCCTACGGGTATGGATCGCCGGACAGTAGCAACTGA

Peptide Sequence

PEP ID	Os05t0595100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29632006:29635661:1 gene:Os05g0595100 transcript:Os05t0595100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-glucose epimerase 1, UDP-glucose 4-epimerase 1 description:Uridine-diphospho-(UDP)-glucose 4-epimerase, Cell wall carbohydrate partitioning during nitrogen (N) limitation (Os05t0595100-01)
Sequence	MVSALLRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANN LDFRKVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVM AAHGCTKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKI ILLRYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRD YIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFA GRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGYGSPDSSN

Transcript Sequence

Transcript ID	Os05t0595100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29632006:29635661:1 gene:Os05g0595100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UDP-glucose epimerase 1, UDP-glucose 4-epimerase 1 description:Uridine-diphospho-(UDP)-glucose 4-epimerase, Cell wall carbohydrate partitioning during nitrogen (N) limitation (Os05t0595100-01)
Sequence	CTTCCGCTCTCTAGCTTTGCTTTGCTTGCTTCATCAAACCCCACACACGCACACAACAAC AACAAGAGTAATCAAAGTAGAAGAAGATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGA CGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCC GCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGG AACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTTGACCTCCGCGACAAGC AAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGC TGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCG GCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGCTGGTGTTCTCAT CATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTT GTGCAATGAACCCCTACGGCAGAACAAAGCTGGTAATCGAAGACATGTGCCGGGATCTGC ATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTC ACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCG TCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACA CCAAGGATGGAACTGGGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATA TCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGATGTGAGGTGTACAATC TGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTG GAAAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACG CTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGGCAAAATACGGGGTAGAGGAGA TGTGCAGGGACCTGTGGAATTGGGCGAGCAAGAACCCCTACGGGTATGGATCGCCGGACA GTAGCAACTGATCCAGCTGAATATAGGCGTCCAATCCTCCAGTAGCAGCAGCAGCAGCAT GACTTCTATACATATATATATATAATCATAAAGAATGAAGAAACAAAGAATTCGGACTTG TTGAGTTACTACTACTACTACTACTAATCCCATCTGATGGACCGCATTGTATAGGGGGCT TGTAGGGGTCCAGCAGCTTCATCATC