Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0594200-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29588659:29593839:-1 gene:Os05g0594200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 1B description:Similar to Cation/proton exchanger 1a. (Os05t0594200-01)
Sequence	ATGCCAGTGTCGCGGATGATGATGGAGTCGAATACGATGGCCAAGGAGATGGCCGTGCGG CACCACCTCCTTCCGGGGTCTCCTCGCCGCCGCACCGCACACAACCTCTCATCTTCCTCC CTCCGCAAAAGCTCCGACGCCTCCCTCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCC CTCCTCGCCAATCTCAACGACGTCCTCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCC GTCCTCCTCGCCATCGCCGCCACTTACCTCCACTTCGGACAGGTGTGGGTGTTTGTGCTT AGCTTAATCGGCCTCGTTCCTCTTGCTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCA TTTTACACCGGTCCTACTGTGGGAGGACTACTGAACGCGACATTTGGGAACGTGACGGAG GTGATAATCGCGCTGTTGGCGCTGCGAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTG CTGGGATCCATCCTCTCCAACCTGCTGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGC ATCGCCAACCTCCGCGCCCACCAGCCGTACGACACCAAGCAAGCTCACGTCAACACCGCC CTCCTCATGCTCGCCGTCCTCTGCCACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACC TCCGGCGACCACGCCATCGTCTCCGGCGACGCCGCCCTCCACCTGTCGCGTGCCTGCAGC ATCCTCATGCTCATCGCCTACCTGGCCTACCTCTTCTTCCAACTCAACACGCATCGCCAG CTGTTTGAGCCCCAACAGGTTGAGGATGATGACGACGATGATTTAGTGATCGCTCAAGAT GATGAGCCAGTACTGGGATTCTCGAGTGCCATGATTTGGCTGGCTCTCATGACTCTCCTG ACTGCGCTCTTGTCAGGGTATGTTGTGAGCACAATTGAGGCGGCCTCAGAATCATGGGAA CTATCAGTGAGCTTCATTAGCATCATCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCAT GCCGGTGCCGTCATATTTGCTCTCAAGAACAAGATGGATATTACTCTCGGAGTGTCTTTG GGCTCTGCCACACAGATCTCCATGTTTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACT ATGGGAATCCCAATGGATCTTGATTTCAACCTGCTGGAGACTGGCTCTCTGTTTCTAGCA ATATTAGTGACAGCCTTCACCCTCCAGGAGGGAGAATCACATTATCTGAAGGGATTGATT CTTGTCCTGTGCTACGCTGTCATCAGCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCA GGAGGGACGGACGGTGTTCACCATCTGGATGTGATTGTGTAG

Peptide Sequence

PEP ID	Os05t0594200-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29588659:29593839:-1 gene:Os05g0594200 transcript:Os05t0594200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 1B description:Similar to Cation/proton exchanger 1a. (Os05t0594200-01)
Sequence	MPVSRMMMESNTMAKEMAVRHHLLPGSPRRRTAHNLSSSSLRKSSDASLLHKVPCAALRS LLANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIA FYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAG IANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAALHLSRACS ILMLIAYLAYLFFQLNTHRQLFEPQQVEDDDDDDLVIAQDDEPVLGFSSAMIWLALMTLL TALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMDITLGVSL GSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGESHYLKGLI LVLCYAVISVCFFVIRRRSAGGTDGVHHLDVIV

Transcript Sequence

Transcript ID	Os05t0594200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29588659:29593839:-1 gene:Os05g0594200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca(2+)/H(+) EXCHANGER 1B description:Similar to Cation/proton exchanger 1a. (Os05t0594200-01)
Sequence	GGATTGGTTTCTTTCTGCTCTGTTGCAGCTCCGTTGTCTATGGTAGGTACCTTTTGGACG GAGGTTTTGCATTTGCCTAGTTACTAGTAACTGCATAATTAACAGGAGGAGTACTACCAA GAATGCATACTAATTATTCGCGTGATATTTTGTACGTTTAAGTTTAGAGAACCCGGGATT CGACCAGACCATCAGTCCACTCTCTCTCTCTCTCTGCTTCTTCTTGTGTTGTGCTTGTGC CTCCTCATTATTAATATCTGTACTCCATATTCTACTACTGCATGCTGGAGTACTCTGGTC ATGGAGCATTTGACATTTGCATCCACCCCGATGAGCTGAGCTGCTCCATTAATATACTAT TCCTCCTCAATTAGTCATTCACTACATACATACAGCAAAATCCTAGCACCACGACGGCGG CCGCATTTGTATGAAATCGATAGATCGTCTCTCTCTCTCTCTCATCCAACCAACCACGCA CAGCGACTCAGCGAGCGAGGAACAACTAGAGCTTGATGCCAGTGTCGCGGATGATGATGG AGTCGAATACGATGGCCAAGGAGATGGCCGTGCGGCACCACCTCCTTCCGGGGTCTCCTC GCCGCCGCACCGCACACAACCTCTCATCTTCCTCCCTCCGCAAAAGCTCCGACGCCTCCC TCCTCCACAAGGTTCCCTGCGCCGCCCTCCGCTCCCTCCTCGCCAATCTCAACGACGTCC TCCTCACCACCAGGCTCTTCCTCCTCTTCCCCGCCGTCCTCCTCGCCATCGCCGCCACTT ACCTCCACTTCGGACAGGTGTGGGTGTTTGTGCTTAGCTTAATCGGCCTCGTTCCTCTTG CTGAGCGACTCAGCTTCCTCACCGAGCAGATTGCATTTTACACCGGTCCTACTGTGGGAG GACTACTGAACGCGACATTTGGGAACGTGACGGAGGTGATAATCGCGCTGTTGGCGCTGC GAGAAGGAAAGATTGAGGTGGTGAAATGCTCCCTGCTGGGATCCATCCTCTCCAACCTGC TGCTTGTCCTCGGCACCTCCCTCTTCCTCGCCGGCATCGCCAACCTCCGCGCCCACCAGC CGTACGACACCAAGCAAGCTCACGTCAACACCGCCCTCCTCATGCTCGCCGTCCTCTGCC ACTCCCTGCCGCTCATGCTCAGGTACGCCGTCACCTCCGGCGACCACGCCATCGTCTCCG GCGACGCCGCCCTCCACCTGTCGCGTGCCTGCAGCATCCTCATGCTCATCGCCTACCTGG CCTACCTCTTCTTCCAACTCAACACGCATCGCCAGCTGTTTGAGCCCCAACAGGTTGAGG ATGATGACGACGATGATTTAGTGATCGCTCAAGATGATGAGCCAGTACTGGGATTCTCGA GTGCCATGATTTGGCTGGCTCTCATGACTCTCCTGACTGCGCTCTTGTCAGGGTATGTTG TGAGCACAATTGAGGCGGCCTCAGAATCATGGGAACTATCAGTGAGCTTCATTAGCATCA TCTTGCTTCCCATCGTTGGGAACGCAGCAGAGCATGCCGGTGCCGTCATATTTGCTCTCA AGAACAAGATGGATATTACTCTCGGAGTGTCTTTGGGCTCTGCCACACAGATCTCCATGT TTGTGGTTCCAGTGAGTGTGATTGTAGCCTGGACTATGGGAATCCCAATGGATCTTGATT TCAACCTGCTGGAGACTGGCTCTCTGTTTCTAGCAATATTAGTGACAGCCTTCACCCTCC AGGAGGGAGAATCACATTATCTGAAGGGATTGATTCTTGTCCTGTGCTACGCTGTCATCA GCGTGTGCTTTTTCGTTATAAGACGGCGTTCTGCAGGAGGGACGGACGGTGTTCACCATC TGGATGTGATTGTGTAGCAAATTACTAACAGGCAGACCGCAGAAGCAGAAACGTACGTAC ATGCGCCTAACATATATATGGAGTCCGTACAGTACGTGCTAGCTACGGAGTACTCCTGTA CACTACTGTACTACTGCTTGCACAAGAGAAGAGGATCGAGTACCGTAGCTAGCACAGGCG GCGGAGACGAGACGATCTGCTTGCTTGAGGAGGCAGCCGATCGAAGCCGGACTGGGCGGA GATCGATGCATGGATCCAGTTTGTTTAGACTGACGGACGATAGAGGATGATACCACGACC CAACCATCCGTCCCTGCAATTGGCTGGTTTGGTCATTCAAATAGGGAATCACAATTGGGT TTTAATGGGTTGCTTTAGTTTAGGTCGTTTTGGAATGGTTTGTTTATATTTATCTTTTTC AAAGGAGTTTGTTTAGGTTTATCGAACTACTAGAATATACATCCATCTTAAGATTATTAC ATTTTAAAATAAAGATATATAGTATG