Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0593900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29579051:29580572:-1 gene:Os05g0593900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar processing enzyme 4, legumain 4 description:Similar to C13 endopeptidase NP1 precursor. (Os05t0593900-01)
Sequence	ATGGGGCGCGGTCTCCTCTGCCTGCTGCTGCTGCAGCTCGTCGGCCTCGTCGTCGCCGGC GGTGGGCGGTGGCGGTGGCAGGAGGAGTTCCTCCGGCTGCCGTCGTCGGATGAGACGACG AGGTGGGCGGTGCTGATCGCGGGGTCGAATGGGTTCTATAACTACCGGCACCAGGCGGAC GTGTGCCACGCGTACCAGATCATGAGGAAGGGAGGCGTGGAGGAGCAAAACATCGTGGTG ATGATGTACGACGACATCGCCCACAACCCCGACAACCCCAGGCCTGGGCTCATCTTCAAC CACCCTTCCGGCCCCGACGTCTACGCCGGCGTCCCCAAGGATTACACCGGCGACGACGTC AACGTCAACAACTTCCTCGCCGTCCTCCTCGGCAACCGCTCCGCCCTCACCGGCTCCGGC AGCGGCAAGGTCGTCGCCAGCGGCCCCAACGACCACGTCTTCGTCTACTACGCCGACCAC GGCGGCCCCGGCGTCCTGAGCATGCCAGCCGACGGCGAGTACCTGTACGCCGACGACCTG GTCAAGGCGCTCAAGAAGAAGCACGCCGGCGGCGGGTACAAGAGCCTGGTCGTGTACGTG GAGGCGTGCGAGTCCGGCAGCATCTTCGAGGGCCTCCTGCCTTCCGACATCTCCGTGTAC GCCACCACGGCCTCCAACGCGGAGGAGAGCAGCTGGGGCACCTACTGCCCCGGCGACGAC CACGACGCCCCGGCGGCGGAGTTCGACACCTGCCTCGGGGACCTCTACAGCGTGGCGTGG ATGGAGGACGCGGAGGCGCACCAGGAGGGGCGCCTCGCCGAGACGCTGCGGCAGCAGTAC AGGACGGTGAAGAACCGGACGTCCGACGAGGGCACCTACACGCTCGGCTCCCACGTCATG CAGTACGGCGACATGGCGCTCGCACCGCAGAGCCTGGACCTCTACTACATGGATACATCA CCTGCGACGGCGAACGACCACAAATTAGCTGCTGCTGGCGCCAAAGGCAGCCACTCCTAC ACTGTGTCTGTGAATCAGCGCGACGCCGATCTGCTCTACTTGTGGCGCAAGTACCGGAGA GCCGGCGAGGGGACGGCAGAGAAGGTGGAGGCTCGGGAGCGGCTTGTGCAGGAGATGGGA CGGCGATCGCGCGTGGACAGAAGCGTGGAGATGATCGGGGGCCTCCTCTTGGGCGGCGCC AAGCACAAGCAGCAGGTTGTGCGGGAGCGGGCTGCGCTGGTTGAGGACTGGGAGTGCCTC AGGTCGATGGTGCGGACGTTCGAGGATCAGTGTGGGTCGCTGGGACAGTACGGGATAAAG CACATGCGCTCCTTCGCCAACATCTGCAACGCCGGCGTCCCCCACCACGCCATGGCCAAG GCCGCCTCCCTGGCCTGTCCATCCCCTCCTCCGTTACACTTATGA

Peptide Sequence

PEP ID	Os05t0593900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29579051:29580572:-1 gene:Os05g0593900 transcript:Os05t0593900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar processing enzyme 4, legumain 4 description:Similar to C13 endopeptidase NP1 precursor. (Os05t0593900-01)
Sequence	MGRGLLCLLLLQLVGLVVAGGGRWRWQEEFLRLPSSDETTRWAVLIAGSNGFYNYRHQAD VCHAYQIMRKGGVEEQNIVVMMYDDIAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGDDV NVNNFLAVLLGNRSALTGSGSGKVVASGPNDHVFVYYADHGGPGVLSMPADGEYLYADDL VKALKKKHAGGGYKSLVVYVEACESGSIFEGLLPSDISVYATTASNAEESSWGTYCPGDD HDAPAAEFDTCLGDLYSVAWMEDAEAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSHVM QYGDMALAPQSLDLYYMDTSPATANDHKLAAAGAKGSHSYTVSVNQRDADLLYLWRKYRR AGEGTAEKVEARERLVQEMGRRSRVDRSVEMIGGLLLGGAKHKQQVVRERAALVEDWECL RSMVRTFEDQCGSLGQYGIKHMRSFANICNAGVPHHAMAKAASLACPSPPPLHL

Transcript Sequence

Transcript ID	Os05t0593900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29579051:29580572:-1 gene:Os05g0593900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:vacuolar processing enzyme 4, legumain 4 description:Similar to C13 endopeptidase NP1 precursor. (Os05t0593900-01)
Sequence	ATGGGGCGCGGTCTCCTCTGCCTGCTGCTGCTGCAGCTCGTCGGCCTCGTCGTCGCCGGC GGTGGGCGGTGGCGGTGGCAGGAGGAGTTCCTCCGGCTGCCGTCGTCGGATGAGACGACG AGGTGGGCGGTGCTGATCGCGGGGTCGAATGGGTTCTATAACTACCGGCACCAGGCGGAC GTGTGCCACGCGTACCAGATCATGAGGAAGGGAGGCGTGGAGGAGCAAAACATCGTGGTG ATGATGTACGACGACATCGCCCACAACCCCGACAACCCCAGGCCTGGGCTCATCTTCAAC CACCCTTCCGGCCCCGACGTCTACGCCGGCGTCCCCAAGGATTACACCGGCGACGACGTC AACGTCAACAACTTCCTCGCCGTCCTCCTCGGCAACCGCTCCGCCCTCACCGGCTCCGGC AGCGGCAAGGTCGTCGCCAGCGGCCCCAACGACCACGTCTTCGTCTACTACGCCGACCAC GGCGGCCCCGGCGTCCTGAGCATGCCAGCCGACGGCGAGTACCTGTACGCCGACGACCTG GTCAAGGCGCTCAAGAAGAAGCACGCCGGCGGCGGGTACAAGAGCCTGGTCGTGTACGTG GAGGCGTGCGAGTCCGGCAGCATCTTCGAGGGCCTCCTGCCTTCCGACATCTCCGTGTAC GCCACCACGGCCTCCAACGCGGAGGAGAGCAGCTGGGGCACCTACTGCCCCGGCGACGAC CACGACGCCCCGGCGGCGGAGTTCGACACCTGCCTCGGGGACCTCTACAGCGTGGCGTGG ATGGAGGACGCGGAGGCGCACCAGGAGGGGCGCCTCGCCGAGACGCTGCGGCAGCAGTAC AGGACGGTGAAGAACCGGACGTCCGACGAGGGCACCTACACGCTCGGCTCCCACGTCATG CAGTACGGCGACATGGCGCTCGCACCGCAGAGCCTGGACCTCTACTACATGGATACATCA CCTGCGACGGCGAACGACCACAAATTAGCTGCTGCTGGCGCCAAAGGCAGCCACTCCTAC ACTGTGTCTGTGAATCAGCGCGACGCCGATCTGCTCTACTTGTGGCGCAAGTACCGGAGA GCCGGCGAGGGGACGGCAGAGAAGGTGGAGGCTCGGGAGCGGCTTGTGCAGGAGATGGGA CGGCGATCGCGCGTGGACAGAAGCGTGGAGATGATCGGGGGCCTCCTCTTGGGCGGCGCC AAGCACAAGCAGCAGGTTGTGCGGGAGCGGGCTGCGCTGGTTGAGGACTGGGAGTGCCTC AGGTCGATGGTGCGGACGTTCGAGGATCAGTGTGGGTCGCTGGGACAGTACGGGATAAAG CACATGCGCTCCTTCGCCAACATCTGCAACGCCGGCGTCCCCCACCACGCCATGGCCAAG GCCGCCTCCCTGGCCTGTCCATCCCCTCCTCCGTTACACTTATGATCTCTAATTGATCTC CATCACTAGCTGCAGCCTGCAATAACAATGATCGATGTAATGTGCATCACCAAATCAAAT ATATGTCATCATACTACTGCCT