Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0593100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29547451:29551624:-1 gene:Os05g0593100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit). (Os05t0593100-01)
Sequence	ATGGCCACACGTTATTGGATCGTGTCTCTTCCCGTGCAGACTCCTGGCTCCACCGCCAAT TCTCTCTGGGCGCGCCTCCAGGACTCCATCTCGCGCCACTCCTTCGACACGCCGCTCTAC CGGTTCAACGTCCCCGATCTCCGCGTCGGCACGCTCGACTCCCTCCTCGCCCTCAGCGAC GATCTCGTCAAGTCCAACGTCTTCATCGAGGGGGTCTCGCACAAGATCCGGAGGCAGATC GAGGAGCTAGAGCGCGCCGGGGGTGTCGAGAGTGGGGCTCTCACCGTTGACGGCGTCCCC GTCGACACCTACCTCACCAGGTTTGTGTGGGATGAGGGCAAATACCCAACGATGTCACCG CTCAAGGAGATTGTCGGCAGCATCCAATCACAGGTCTCCAAGATTGAAGATGACATGAAG GTTCGAGGAGCGGAATACAATAATGTAAGGAGCCAGCTTAGTGCGATCAACAGAAAGCAA ACTGGAAGCTTAGCAGTTCGTGATCTTTCCAATCTGGTAAAACCAGAGGATATGGTCACA TCAGAACATCTAGTGACACTCCTTGCAGTTGTTCCTAAGTACTCTCAAAAGGATTGGTTG TCAAGCTATGAGTCCCTTGACACATTTGTGGTACCGAGATCGTCTAAAAAACTTTATGAG GACAATGAGTATGCTCTCTACACGGTAACATTGTTTGCTAAGGTTGTTGACAACTTTAAG GTCCGTGCACGTGAAAAAGGTTTCCAGGTTCGCGATTTTGAGTATAGTTCTGAAGCACAG GAAAGTAGGAAGGAAGAGCTGGAAAAGCTAATGCAAGACCAGGAAGCAATGAGGGCATCA CTTCTGCAATGGTGCTATGCCAGCTACAGTGAGGTATTCAGTTCCTGGATGCACTTCTGT GCTGTGCGTGTCTTTGTAGAGAGCATTCTTAGATATGGTCTTCCCCCATCATTCCTGTCT GCTGTTCTAGCACCTTCTCAAAAGGGTGAAAAGAAAGTAAGGAGCATCCTGGAGGAACTC TGTGGCAATGTCCATAGTATTTACTGGAAATCTGAAGACGATGTTGGTGTAGCTGGTCTG GGAGGTGAAACCGAGGCTCACCCCTATGTTTCCTTCACAATAAATTTTATCTGA

Peptide Sequence

PEP ID	Os05t0593100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29547451:29551624:-1 gene:Os05g0593100 transcript:Os05t0593100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit). (Os05t0593100-01)
Sequence	MATRYWIVSLPVQTPGSTANSLWARLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSD DLVKSNVFIEGVSHKIRRQIEELERAGGVESGALTVDGVPVDTYLTRFVWDEGKYPTMSP LKEIVGSIQSQVSKIEDDMKVRGAEYNNVRSQLSAINRKQTGSLAVRDLSNLVKPEDMVT SEHLVTLLAVVPKYSQKDWLSSYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFK VRAREKGFQVRDFEYSSEAQESRKEELEKLMQDQEAMRASLLQWCYASYSEVFSSWMHFC AVRVFVESILRYGLPPSFLSAVLAPSQKGEKKVRSILEELCGNVHSIYWKSEDDVGVAGL GGETEAHPYVSFTINFI

Transcript Sequence

Transcript ID	Os05t0593100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29547451:29551624:-1 gene:Os05g0593100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit). (Os05t0593100-01)
Sequence	GTCTGTTTTGTTTTCCCCTCCGACTCCGACTCCGATCGATCTCCACCCCGAATCCCTCCT CCTCACCGCCGGCGAGCTTCCGGCTGCGGCGGAGATGGCCACACGTTATTGGATCGTGTC TCTTCCCGTGCAGACTCCTGGCTCCACCGCCAATTCTCTCTGGGCGCGCCTCCAGGACTC CATCTCGCGCCACTCCTTCGACACGCCGCTCTACCGGTTCAACGTCCCCGATCTCCGCGT CGGCACGCTCGACTCCCTCCTCGCCCTCAGCGACGATCTCGTCAAGTCCAACGTCTTCAT CGAGGGGGTCTCGCACAAGATCCGGAGGCAGATCGAGGAGCTAGAGCGCGCCGGGGGTGT CGAGAGTGGGGCTCTCACCGTTGACGGCGTCCCCGTCGACACCTACCTCACCAGGTTTGT GTGGGATGAGGGCAAATACCCAACGATGTCACCGCTCAAGGAGATTGTCGGCAGCATCCA ATCACAGGTCTCCAAGATTGAAGATGACATGAAGGTTCGAGGAGCGGAATACAATAATGT AAGGAGCCAGCTTAGTGCGATCAACAGAAAGCAAACTGGAAGCTTAGCAGTTCGTGATCT TTCCAATCTGGTAAAACCAGAGGATATGGTCACATCAGAACATCTAGTGACACTCCTTGC AGTTGTTCCTAAGTACTCTCAAAAGGATTGGTTGTCAAGCTATGAGTCCCTTGACACATT TGTGGTACCGAGATCGTCTAAAAAACTTTATGAGGACAATGAGTATGCTCTCTACACGGT AACATTGTTTGCTAAGGTTGTTGACAACTTTAAGGTCCGTGCACGTGAAAAAGGTTTCCA GGTTCGCGATTTTGAGTATAGTTCTGAAGCACAGGAAAGTAGGAAGGAAGAGCTGGAAAA GCTAATGCAAGACCAGGAAGCAATGAGGGCATCACTTCTGCAATGGTGCTATGCCAGCTA CAGTGAGGTATTCAGTTCCTGGATGCACTTCTGTGCTGTGCGTGTCTTTGTAGAGAGCAT TCTTAGATATGGTCTTCCCCCATCATTCCTGTCTGCTGTTCTAGCACCTTCTCAAAAGGG TGAAAAGAAAGTAAGGAGCATCCTGGAGGAACTCTGTGGCAATGTCCATAGTATTTACTG GAAATCTGAAGACGATGTTGGTGTAGCTGGTCTGGGAGGTGAAACCGAGGCTCACCCCTA TGTTTCCTTCACAATAAATTTTATCTGAGCACAGTATGTTCCTTGCTACCTGTGGCCAGG CAAGGCAGTGTTTTGGAGTAATTACTACTTTGGCAAACAAAAAACCAGCGAATGGTTCGG TGTATATTATAATTGTGATACGTCAATTCTTTCTTGATTTATTTACCCAGCTTATATGAT CCTGTAGTTTGAACCGATCAATAATGTAGCTTTTTGGGGGAACCTGGACTATTTTCCTGG CACAATAGGGTATCTGTTTGGACTATTTTATCCCCGGCAACTACAATATTCCAACTGTTT CCTTTAGTATATCTATTGTGCTTTGAGAGCACCGTGTAAGATGTTGTGGATATTATGTTT TTGTAACTTTGAGCAGCCAGGTTCGTAATAAAAGATCAATATAAATAATTCAGGTCGCCG AGCCTGATTGTAAACAGTTTGTTGTTGAATTCGAGCTGTCTCCTTTTTTCTTTGACGATT