Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0592800-03
CDS Infomation	cds chromosome:IRGSP-1.0:5:29538676:29541976:-1 gene:Os05g0592800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsABI-LIKE2, protein phosphatase 2C53, protein phosphatase 2C 53, protein phosphatase 81 description:Splicing variant of protein phosphatase 2C 53 (Os05t0592800-01);Clade A type 2C protein phosphatase, ABA signaling, Regulation of root development, Drought resistance (Os05t0592800-02);Similar to Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 2). (Os05t0592800-03)
Sequence	ATGGAGGACCTCGCCCTGCCCGCCGCTCCTCCTGCCCCCACGCTTAGCTTCACGCTCTTA GCCGCCGCCGCCGCCGTCGCCGAGGCCATGGAAGAGGCTCTGGGCGCCGCGCTGCCGCCC CTCACCGCCCCCGTCCCCGCCCCCGGAGACGACTCCGCCTGCGGGAGCCCGTGCTCCGTC GCCAGCGACTGCAGCAGCGTCGCCAGCGCCGACTTCGAGGGCTTCGCCGAGCTAGGCACT TCGCTCCTCGCGGGGCCCGCCGTCTTGTTCGACGACCTCACCGCCGCCTCCGTCGCCGTC GCGGAGGCTGCCGAGCCGAGGGCTGTGGGGGCCACTGCGAGGAGCGTGTTCGCCATGGAC TGCGTTCCGCTCTGGGGGCTGGAGTCCATTTGCGGCCGCCGCCCGGAGATGGAGGACGAC TATGCCGTGGTCCCGCGATTTTTCGACCTTCCTCTGTGGATGGTTGCCGGCGACGCGGCA GTCGACGGCCTCGACCGGGCCTCCTTCCGCCTTCCAGCCCATTTCTTCGCCGTCTACGAT GGCCACGGTGGCGTTCAGGTTGCCAATTACTGCAGGAAGAGGATCCACGCCGTACTGACA GAGGAGCTGCGTAGAGCGGAGGACGACGCGTGTGGCTCTGACTTATCTGGCCTTGAGTCC AAGAAGCTGTGGGAGAAGGCGTTCGTGGATTGCTTCAGTCGTGTTGACGCTGAGGTGGGA GGAAATGCTGCGTCTGGAGCACCGCCTGTTGCTCCAGACACCGTGGGGTCAACTGCTGTC GTCGCAGTCGTTTGCTCGTCACATGTCATCGTAGCCAACTGCGGTGACTCGCGTGCTGTT CTCTGCCGGGGCAAGCAGCCCCTGCCCCTGTCACTAGATCATAAACCAAATAGGGAAGAC GAGTACGCGAGGATTGAGGCGCTGGGTGGCAAGGTTATCCAATGGAATGGTTATCGAGTT CTCGGTGTTCTTGCCATGTCGCGATCAATCGGGGACAAATACCTGAAGCCATATATAATC CCGGTCCCTGAGGTCACAGTTGTCGCTCGTGCAAAAGACGATGATTGCCTTATTCTTGCA AGTGATGGCCTTTGGGATGTAATGTCGAACGAAGAGGTCTGTGATGCTGCTCGCAAGAGG ATATTACTATGGCACAAGAAGAATGCGGCCACCGCATCAACGTCATCGGCCCAAATAAGC GGTGATTCTTCAGATCCGGCTGCTCAAGCAGCTGCCGACTACTTGTCCAAGCTTGCCCTA CAGAAGGGGAGCAAGGACAACATCACTGTCGTTGTAATTGACCTCAAGGCACATAGGAAG TTCAAGAGCAAAGCATGA

Peptide Sequence

PEP ID	Os05t0592800-03
PEP Infomation	pep chromosome:IRGSP-1.0:5:29538676:29541976:-1 gene:Os05g0592800 transcript:Os05t0592800-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsABI-LIKE2, protein phosphatase 2C53, protein phosphatase 2C 53, protein phosphatase 81 description:Splicing variant of protein phosphatase 2C 53 (Os05t0592800-01);Clade A type 2C protein phosphatase, ABA signaling, Regulation of root development, Drought resistance (Os05t0592800-02);Similar to Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 2). (Os05t0592800-03)
Sequence	MEDLALPAAPPAPTLSFTLLAAAAAVAEAMEEALGAALPPLTAPVPAPGDDSACGSPCSV ASDCSSVASADFEGFAELGTSLLAGPAVLFDDLTAASVAVAEAAEPRAVGATARSVFAMD CVPLWGLESICGRRPEMEDDYAVVPRFFDLPLWMVAGDAAVDGLDRASFRLPAHFFAVYD GHGGVQVANYCRKRIHAVLTEELRRAEDDACGSDLSGLESKKLWEKAFVDCFSRVDAEVG GNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNRED EYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILA SDGLWDVMSNEEVCDAARKRILLWHKKNAATASTSSAQISGDSSDPAAQAAADYLSKLAL QKGSKDNITVVVIDLKAHRKFKSKA

Transcript Sequence

Transcript ID	Os05t0592800-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29538676:29541976:-1 gene:Os05g0592800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsABI-LIKE2, protein phosphatase 2C53, protein phosphatase 2C 53, protein phosphatase 81 description:Splicing variant of protein phosphatase 2C 53 (Os05t0592800-01);Clade A type 2C protein phosphatase, ABA signaling, Regulation of root development, Drought resistance (Os05t0592800-02);Similar to Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C) (Abscisic acid- insensitive 2). (Os05t0592800-03)
Sequence	ACGCAACCCGATCCATTCCCAAATCCCTCCTCTCATCAACTCGACTCTCGGTCGGCGTCA CCGGCGTCGGAGGCGGAGGCGGAGGCGGCGGCCGCGTCGGCAAGGTAGTGCTGTGCTGGA TCGAGTCGAGCAGCTGGCTGCGCGCGCGGTTTGTGGCTCTCTGTGTGAGTCCGGCGCTGC TGCTTCAATTCCTTCTTCCCCAGGGCACCTCCCGTGAGCCGCCATCTCCCTCCCTCACCT ACCTCTGGATTCGCTCCAGATCCGCCCATGAGTAGGCCCCCACGCCCACCGCCTGCTCGC CATCGCGCCTCCACTCCACCACACCATGCCGATCCCCACCACCTCTGACACTACTCCGCC CCTCCCCCTCTCTCATTCCCATGGAGGACCTCGCCCTGCCCGCCGCTCCTCCTGCCCCCA CGCTTAGCTTCACGCTCTTAGCCGCCGCCGCCGCCGTCGCCGAGGCCATGGAAGAGGCTC TGGGCGCCGCGCTGCCGCCCCTCACCGCCCCCGTCCCCGCCCCCGGAGACGACTCCGCCT GCGGGAGCCCGTGCTCCGTCGCCAGCGACTGCAGCAGCGTCGCCAGCGCCGACTTCGAGG GCTTCGCCGAGCTAGGCACTTCGCTCCTCGCGGGGCCCGCCGTCTTGTTCGACGACCTCA CCGCCGCCTCCGTCGCCGTCGCGGAGGCTGCCGAGCCGAGGGCTGTGGGGGCCACTGCGA GGAGCGTGTTCGCCATGGACTGCGTTCCGCTCTGGGGGCTGGAGTCCATTTGCGGCCGCC GCCCGGAGATGGAGGACGACTATGCCGTGGTCCCGCGATTTTTCGACCTTCCTCTGTGGA TGGTTGCCGGCGACGCGGCAGTCGACGGCCTCGACCGGGCCTCCTTCCGCCTTCCAGCCC ATTTCTTCGCCGTCTACGATGGCCACGGTGGCGTTCAGGTTGCCAATTACTGCAGGAAGA GGATCCACGCCGTACTGACAGAGGAGCTGCGTAGAGCGGAGGACGACGCGTGTGGCTCTG ACTTATCTGGCCTTGAGTCCAAGAAGCTGTGGGAGAAGGCGTTCGTGGATTGCTTCAGTC GTGTTGACGCTGAGGTGGGAGGAAATGCTGCGTCTGGAGCACCGCCTGTTGCTCCAGACA CCGTGGGGTCAACTGCTGTCGTCGCAGTCGTTTGCTCGTCACATGTCATCGTAGCCAACT GCGGTGACTCGCGTGCTGTTCTCTGCCGGGGCAAGCAGCCCCTGCCCCTGTCACTAGATC ATAAACCAAATAGGGAAGACGAGTACGCGAGGATTGAGGCGCTGGGTGGCAAGGTTATCC AATGGAATGGTTATCGAGTTCTCGGTGTTCTTGCCATGTCGCGATCAATCGGGGACAAAT ACCTGAAGCCATATATAATCCCGGTCCCTGAGGTCACAGTTGTCGCTCGTGCAAAAGACG ATGATTGCCTTATTCTTGCAAGTGATGGCCTTTGGGATGTAATGTCGAACGAAGAGGTCT GTGATGCTGCTCGCAAGAGGATATTACTATGGCACAAGAAGAATGCGGCCACCGCATCAA CGTCATCGGCCCAAATAAGCGGTGATTCTTCAGATCCGGCTGCTCAAGCAGCTGCCGACT ACTTGTCCAAGCTTGCCCTACAGAAGGGGAGCAAGGACAACATCACTGTCGTTGTAATTG ACCTCAAGGCACATAGGAAGTTCAAGAGCAAAGCATGACATTGCCTCCATGAACAATAAC AATAGTTTATAGGAAGCTAGAAATGTGGGAAATCCAAGACAATTTATTTAGCTGCTGCAC CGGTACAATTTGTTTAGCTGCTGTTCAGTACTGGTGCTGCTGCAGCTGCAGCTGCTTCTT TGCCCTCGCCATTTATTTCTGCCGAGGGATGTACTACTAGTATACTGTATTTTTCT