Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0592600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29528780:29534681:-1 gene:Os05g0592600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor 2 related domain containing protein. (Os05t0592600-01);Hypothetical conserved gene. (Os05t0592600-02);Hypothetical conserved gene. (Os05t0592600-03)
Sequence	ATGGGTCGCAAGAAGAACGTCGCCATCGATGACGATGAGTACTCCTTCGACGCCCTCGCG GCCGACGAGGACCAGGGAGAAGACGACGACGAGGCCCCCGCCCCTGCCCCCGCCCCCGTC GAGCCCGATGCCGCCGCCAAATCAGACGCCGAGGACGACGACCTCGATTTCGACTTCAGC AAAGCCAAGAAGAAGAAAAAGAAGAAGGACAAGGGAGCTCGCCCAGTCCCTCTGGAACAC GACGACCTCGACCTAGATAAGCCTGCCCCGCCGCCCCCAGCCGCCGCTGCTGATGAGGCA GACGACGACGAGGCTGCTGCAGCTGCAGCTTCCAAAAAGCCTCAGAAGAAGAAGAAAAAG AAGGGCGGCTTTACTGTGGACAATGAGGACATTGACAAGCTCCTCGCCGAGATCGACGAT ACTTCTCCTCCCACCGAAGAGGCTGAGCCGGTGGAAGAGGTGCCTGCCCCTGATGCAGAT GATGCCTTAGGAAAGAAATCAAAGAAGAAGAAAAAGAAGGGAGGCTTTACCGTCGATGAT GAGGACGTAGACAAGATCCTCGCAGAGTTTGAGGACCAGCCACCTCCTGTCGACGATCCT GAGCCTGAGCCTGAGGCGGTGAAAGATGTGGGTAATGTGGCCGCCTCAACCAGTGTGGAT GATGCGGAAGGCAAGAAATCGAAGAAGAAAAAAAAGAAGAGTGGAAGGACAGCTCAGGAA GAGGAGGATTTGGATAAGCTTCTCGCTGAGCTTGGTGAGGGCCCAACGCCAGCAGAAAAG GAGAAGGAGGTTCTGCCCCAGGCGCCACCTGCTGCGGCAATGGTGAAGGAAGATACTGAA ACCGCAGAGGATGGTAAGGCTGGGGAAGGAGAGGTGGAATCTGCTGCAGCCAAGAAGAAG AAGAAGAAGAAGGAAAAGGAGAAGGAGAAGAAGGCAGCAGCTAAGGAGGCAGATGCTAAG AAAGAAGAGGAAAAGGCTGTAGAAGCTCCTAAAGGGAAGGTTGACATGAAGAAGCTCCCG AAGCACGTGCGGGAGATGCAGGAGGCACTTGCCAGGAGGCAGGAAGCTGAGGAACGGAAG AAGCGTGAGGAGGAAGAACGATTGAGGAAAGAGGAGGAGGAGCGATTGAAGAAAGAGGAG GAGGAGAGGAAAGCTGAGGAAGCAAAGAGGAGGAAGAAGGAGAGAGAAAAGGAGAAGTTG CTGAAGAAGAAGCAGGAGGGTAAGCTCTTGACTGGGAAGCAGAAGGAGGAAGCAAAGAGG TTAGAAGCAATGAGGAGACAATTCCTTGAGCAGAGTGAACTTCAAGTAGCCGATGGTGCT GTCCCTGAGACAAAGAAGAGGCCTATATATGATTCCAAGAAGAAAAAAGGTCAACAGAAG ACTCTGGAGACTGCAAAGGTAGTTGAAGAACAACCACAAGAAGTTAACGAAACTATCAAT GACGAGGAAGAATATGTGTTAGTGGATCAGGAATCTCAGTTGCAAGTGGAGGAATCTGAG AAAACCGAACCTGATCAGGATGTCGAAGAATTGAAACCAGAAGAGGAGGAAGATGAAGAT GAATGGGATGCAAAGAGCTGGGATGATATAGATGTCAATTTGCCTAAGACAAGTGCCTTT GAGGAGGAAGAGGCAAACCCTGTCGCCAAGAAGGTTGCTGAACCTGTTCAGAAGCAGGAA AATTCTAAAGCACAATCTACAGTGGCTACTGTAAAAAAGGTTGCAAACTCCAATAAAGGT GAAACGGAAGATGGCGAATCCAGTAGTGCAAATGCTAGGAGGAATAGAGGCGCTTCAAAG AAAGGACCTATTAAAGAGGATGAGACTAAGAATGGCAGTGACCTTCGTTCACCAATTTGT TGCATCCTTGGTCATGTCGATACTGGTAAGACAAAACTGCTAGACTGTATTAGACGGACC AATGTACAAGAAGGAGAAGCTGGAGGTATTACCCAACAGATTGGGGCTACGTACTTCCCA ACTGAAAATATTAGAGAGAGAACAAAAGAGCTTAAAGCTGATGCCACACTTAAGGTTCCA GGATTGCTTGTTATTGACACTCCTGGTCACGAGTCGTTCAGTAATCTGCGTTCTAGAGGT TCAAGTTTGTGTGACATTGCTATTTTGGTTGTTGACATTATGCACGGTCTTGAACCTCAA ACAATTGAATCCCTGAATCTCTTGAAGAGCCGTGATGCAGTTTTTATCGTTGCCTTAAAT AAGGTTGATCGTCTTTATGGCTGGAAAAAGTGTACAAATGCCCCTATTGGGAAGGCTTTG AGGCAGCAAAATGAAGATGTTAAGAGGGAGTTCAATATGAGGCTTACTGATATTGTGACA CAATTCAAGATGCAAGGTGTGAATACTGCTTTGTACTACAAGAACAAGGAGATGGAAGAT ACATATAACATAGTGCCTACCAGTGCAATAAGTGGTGAAGGCATTCCTGATCTGCTTCTT CTGTTGGTGCAATGGGCACAAAAGACGATGGAAGAAAGACTTACTTTCGTTGATGAAGTC CAGTGTACCGTGCTGGAAGTCAAGGTTGTTGAAGGTCATGGTACTACAGTTGATGTTGTG TTGGTCAACGGTATACTCCATGAAGGAGATCAAATAGTTGTGTGTGGGATGCAGGGACCC ATTGTGACAACAGTTAGAGCTTTGTTGACACCACACCCAATGAGGGAGCTTCGAGTTAAG GGCACATACCAACATCATAAGAAGATTAGAGCTGCACAAGGAGTTAAAATATCAGCACAG GGTCTTGAACATGCAATTGCAGGGACTGCTCTTTATGTGTTAAAGCCTGATGATGATCTG GACAGACTAAAAGATGCTGTGATGGAAGAGATGACTAGGGTTAGAAATCGGATTGATAAG AGTGGCGAAGGTGTCTATGTACAGGCATCTACCCTTGGGTCATTGGAAGCTCTCACTGAG TTCTTGAAGAGCCCTGCTGTGAATATTCCCTTCTGTGATTTCAGTATAGGGCCAGTCCAC AAGAAAGATGTTATGAAGGCCAGTGTTATGCTTGAGAGGAAGAAAGAATATGCTACTATC TTGGCGTTTGATGTCAAAGTGATGCCTGATGCCCGTGATCTTGCAGAAGAGTCTGGTGTG AGGATCTTTGTAGCAGATATAATATACCACCTTTTTGATCAATTTACTGCATACATTAAG AATCTGAGGGAAGAAAAGAAGAAAGAAAGCGCTGAAGAAGCTGTTTTCCCCTGTGTTCTC AAGATTATGCCAAATTGTGTTTTTAACAAGAAGGATCCAATTGTTTTAGGTGTTGATGTC CTTGAAGGAATAGCCAAGGTGGGCACACCTCTATGCATACCCACTAAAGAATATATTGAT ATTGGGAAGATTGCATCTATTGAAATTAATCATAAGCAAGTTGACATGGCCACAAAAGGG CAGAAGGTGGCTATAAAGATTATTGGGAGCAATCCTGATGAGCAGCAGAAGAGTTTTGGT AGGCATTTTGACATGGAAGATGAACTTGTTAGTCGCATCACAAGGCGATCTATTGATCTT CTCAAAGAAAACTATAGAGACGATTTGTCAATGGATGACTGGAAACTTGTTGTTAAGTTG AAGAGCATCTTGAAGATACCATAA

Peptide Sequence

PEP ID	Os05t0592600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29528780:29534681:-1 gene:Os05g0592600 transcript:Os05t0592600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor 2 related domain containing protein. (Os05t0592600-01);Hypothetical conserved gene. (Os05t0592600-02);Hypothetical conserved gene. (Os05t0592600-03)
Sequence	MGRKKNVAIDDDEYSFDALAADEDQGEDDDEAPAPAPAPVEPDAAAKSDAEDDDLDFDFS KAKKKKKKKDKGARPVPLEHDDLDLDKPAPPPPAAAADEADDDEAAAAAASKKPQKKKKK KGGFTVDNEDIDKLLAEIDDTSPPTEEAEPVEEVPAPDADDALGKKSKKKKKKGGFTVDD EDVDKILAEFEDQPPPVDDPEPEPEAVKDVGNVAASTSVDDAEGKKSKKKKKKSGRTAQE EEDLDKLLAELGEGPTPAEKEKEVLPQAPPAAAMVKEDTETAEDGKAGEGEVESAAAKKK KKKKEKEKEKKAAAKEADAKKEEEKAVEAPKGKVDMKKLPKHVREMQEALARRQEAEERK KREEEERLRKEEEERLKKEEEERKAEEAKRRKKEREKEKLLKKKQEGKLLTGKQKEEAKR LEAMRRQFLEQSELQVADGAVPETKKRPIYDSKKKKGQQKTLETAKVVEEQPQEVNETIN DEEEYVLVDQESQLQVEESEKTEPDQDVEELKPEEEEDEDEWDAKSWDDIDVNLPKTSAF EEEEANPVAKKVAEPVQKQENSKAQSTVATVKKVANSNKGETEDGESSSANARRNRGASK KGPIKEDETKNGSDLRSPICCILGHVDTGKTKLLDCIRRTNVQEGEAGGITQQIGATYFP TENIRERTKELKADATLKVPGLLVIDTPGHESFSNLRSRGSSLCDIAILVVDIMHGLEPQ TIESLNLLKSRDAVFIVALNKVDRLYGWKKCTNAPIGKALRQQNEDVKREFNMRLTDIVT QFKMQGVNTALYYKNKEMEDTYNIVPTSAISGEGIPDLLLLLVQWAQKTMEERLTFVDEV QCTVLEVKVVEGHGTTVDVVLVNGILHEGDQIVVCGMQGPIVTTVRALLTPHPMRELRVK GTYQHHKKIRAAQGVKISAQGLEHAIAGTALYVLKPDDDLDRLKDAVMEEMTRVRNRIDK SGEGVYVQASTLGSLEALTEFLKSPAVNIPFCDFSIGPVHKKDVMKASVMLERKKEYATI LAFDVKVMPDARDLAEESGVRIFVADIIYHLFDQFTAYIKNLREEKKKESAEEAVFPCVL KIMPNCVFNKKDPIVLGVDVLEGIAKVGTPLCIPTKEYIDIGKIASIEINHKQVDMATKG QKVAIKIIGSNPDEQQKSFGRHFDMEDELVSRITRRSIDLLKENYRDDLSMDDWKLVVKL KSILKIP

Transcript Sequence

Transcript ID	Os05t0592600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29528780:29534681:-1 gene:Os05g0592600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor 2 related domain containing protein. (Os05t0592600-01);Hypothetical conserved gene. (Os05t0592600-02);Hypothetical conserved gene. (Os05t0592600-03)
Sequence	GATTGCTGAGTAGCATTAGCAAAGGAGCAAAGGAAAGGAACCTCGATCTCCATCTCCATC TCCGCCCCCAAACCCTAACACACACACGCCGACTCTCCAAACCCTACACCCCCCCAACCC CCAACCCCGCCGATCCCCCCGCTCGCCGCCGATGGGTCGCAAGAAGAACGTCGCCATCGA TGACGATGAGTACTCCTTCGACGCCCTCGCGGCCGACGAGGACCAGGGAGAAGACGACGA CGAGGCCCCCGCCCCTGCCCCCGCCCCCGTCGAGCCCGATGCCGCCGCCAAATCAGACGC CGAGGACGACGACCTCGATTTCGACTTCAGCAAAGCCAAGAAGAAGAAAAAGAAGAAGGA CAAGGGAGCTCGCCCAGTCCCTCTGGAACACGACGACCTCGACCTAGATAAGCCTGCCCC GCCGCCCCCAGCCGCCGCTGCTGATGAGGCAGACGACGACGAGGCTGCTGCAGCTGCAGC TTCCAAAAAGCCTCAGAAGAAGAAGAAAAAGAAGGGCGGCTTTACTGTGGACAATGAGGA CATTGACAAGCTCCTCGCCGAGATCGACGATACTTCTCCTCCCACCGAAGAGGCTGAGCC GGTGGAAGAGGTGCCTGCCCCTGATGCAGATGATGCCTTAGGAAAGAAATCAAAGAAGAA GAAAAAGAAGGGAGGCTTTACCGTCGATGATGAGGACGTAGACAAGATCCTCGCAGAGTT TGAGGACCAGCCACCTCCTGTCGACGATCCTGAGCCTGAGCCTGAGGCGGTGAAAGATGT GGGTAATGTGGCCGCCTCAACCAGTGTGGATGATGCGGAAGGCAAGAAATCGAAGAAGAA AAAAAAGAAGAGTGGAAGGACAGCTCAGGAAGAGGAGGATTTGGATAAGCTTCTCGCTGA GCTTGGTGAGGGCCCAACGCCAGCAGAAAAGGAGAAGGAGGTTCTGCCCCAGGCGCCACC TGCTGCGGCAATGGTGAAGGAAGATACTGAAACCGCAGAGGATGGTAAGGCTGGGGAAGG AGAGGTGGAATCTGCTGCAGCCAAGAAGAAGAAGAAGAAGAAGGAAAAGGAGAAGGAGAA GAAGGCAGCAGCTAAGGAGGCAGATGCTAAGAAAGAAGAGGAAAAGGCTGTAGAAGCTCC TAAAGGGAAGGTTGACATGAAGAAGCTCCCGAAGCACGTGCGGGAGATGCAGGAGGCACT TGCCAGGAGGCAGGAAGCTGAGGAACGGAAGAAGCGTGAGGAGGAAGAACGATTGAGGAA AGAGGAGGAGGAGCGATTGAAGAAAGAGGAGGAGGAGAGGAAAGCTGAGGAAGCAAAGAG GAGGAAGAAGGAGAGAGAAAAGGAGAAGTTGCTGAAGAAGAAGCAGGAGGGTAAGCTCTT GACTGGGAAGCAGAAGGAGGAAGCAAAGAGGTTAGAAGCAATGAGGAGACAATTCCTTGA GCAGAGTGAACTTCAAGTAGCCGATGGTGCTGTCCCTGAGACAAAGAAGAGGCCTATATA TGATTCCAAGAAGAAAAAAGGTCAACAGAAGACTCTGGAGACTGCAAAGGTAGTTGAAGA ACAACCACAAGAAGTTAACGAAACTATCAATGACGAGGAAGAATATGTGTTAGTGGATCA GGAATCTCAGTTGCAAGTGGAGGAATCTGAGAAAACCGAACCTGATCAGGATGTCGAAGA ATTGAAACCAGAAGAGGAGGAAGATGAAGATGAATGGGATGCAAAGAGCTGGGATGATAT AGATGTCAATTTGCCTAAGACAAGTGCCTTTGAGGAGGAAGAGGCAAACCCTGTCGCCAA GAAGGTTGCTGAACCTGTTCAGAAGCAGGAAAATTCTAAAGCACAATCTACAGTGGCTAC TGTAAAAAAGGTTGCAAACTCCAATAAAGGTGAAACGGAAGATGGCGAATCCAGTAGTGC AAATGCTAGGAGGAATAGAGGCGCTTCAAAGAAAGGACCTATTAAAGAGGATGAGACTAA GAATGGCAGTGACCTTCGTTCACCAATTTGTTGCATCCTTGGTCATGTCGATACTGGTAA GACAAAACTGCTAGACTGTATTAGACGGACCAATGTACAAGAAGGAGAAGCTGGAGGTAT TACCCAACAGATTGGGGCTACGTACTTCCCAACTGAAAATATTAGAGAGAGAACAAAAGA GCTTAAAGCTGATGCCACACTTAAGGTTCCAGGATTGCTTGTTATTGACACTCCTGGTCA CGAGTCGTTCAGTAATCTGCGTTCTAGAGGTTCAAGTTTGTGTGACATTGCTATTTTGGT TGTTGACATTATGCACGGTCTTGAACCTCAAACAATTGAATCCCTGAATCTCTTGAAGAG CCGTGATGCAGTTTTTATCGTTGCCTTAAATAAGGTTGATCGTCTTTATGGCTGGAAAAA GTGTACAAATGCCCCTATTGGGAAGGCTTTGAGGCAGCAAAATGAAGATGTTAAGAGGGA GTTCAATATGAGGCTTACTGATATTGTGACACAATTCAAGATGCAAGGTGTGAATACTGC TTTGTACTACAAGAACAAGGAGATGGAAGATACATATAACATAGTGCCTACCAGTGCAAT AAGTGGTGAAGGCATTCCTGATCTGCTTCTTCTGTTGGTGCAATGGGCACAAAAGACGAT GGAAGAAAGACTTACTTTCGTTGATGAAGTCCAGTGTACCGTGCTGGAAGTCAAGGTTGT TGAAGGTCATGGTACTACAGTTGATGTTGTGTTGGTCAACGGTATACTCCATGAAGGAGA TCAAATAGTTGTGTGTGGGATGCAGGGACCCATTGTGACAACAGTTAGAGCTTTGTTGAC ACCACACCCAATGAGGGAGCTTCGAGTTAAGGGCACATACCAACATCATAAGAAGATTAG AGCTGCACAAGGAGTTAAAATATCAGCACAGGGTCTTGAACATGCAATTGCAGGGACTGC TCTTTATGTGTTAAAGCCTGATGATGATCTGGACAGACTAAAAGATGCTGTGATGGAAGA GATGACTAGGGTTAGAAATCGGATTGATAAGAGTGGCGAAGGTGTCTATGTACAGGCATC TACCCTTGGGTCATTGGAAGCTCTCACTGAGTTCTTGAAGAGCCCTGCTGTGAATATTCC CTTCTGTGATTTCAGTATAGGGCCAGTCCACAAGAAAGATGTTATGAAGGCCAGTGTTAT GCTTGAGAGGAAGAAAGAATATGCTACTATCTTGGCGTTTGATGTCAAAGTGATGCCTGA TGCCCGTGATCTTGCAGAAGAGTCTGGTGTGAGGATCTTTGTAGCAGATATAATATACCA CCTTTTTGATCAATTTACTGCATACATTAAGAATCTGAGGGAAGAAAAGAAGAAAGAAAG CGCTGAAGAAGCTGTTTTCCCCTGTGTTCTCAAGATTATGCCAAATTGTGTTTTTAACAA GAAGGATCCAATTGTTTTAGGTGTTGATGTCCTTGAAGGAATAGCCAAGGTGGGCACACC TCTATGCATACCCACTAAAGAATATATTGATATTGGGAAGATTGCATCTATTGAAATTAA TCATAAGCAAGTTGACATGGCCACAAAAGGGCAGAAGGTGGCTATAAAGATTATTGGGAG CAATCCTGATGAGCAGCAGAAGAGTTTTGGTAGGCATTTTGACATGGAAGATGAACTTGT TAGTCGCATCACAAGGCGATCTATTGATCTTCTCAAAGAAAACTATAGAGACGATTTGTC AATGGATGACTGGAAACTTGTTGTTAAGTTGAAGAGCATCTTGAAGATACCATAAAATCG TTAAGCTTGCGGAAGCCCCTCAAGCCTGTCCACCAATCGGCAAAAATGAAAAGTTAATGG TGGCATCTGGGCTACTGGGGTAGCATCCATAAAATTTTCACGTTACTCAGACTTGGATTT GCCGGGTTGAGAAGTTCTATTCTGACACACCGATGTTCAAGCTGCCCAGGGAGTTTTTCA ATTTTGATACGGTTTTGTTTTATTGTAATTTGTTCGAAATGCGGTTGATCAAACATTTTA CAAATATAAGTGAAACTACCCGATTTTGAGGGGTTCTTGAAAGAGGCTATGTTTGTCTTT TTTTTTTCCCTGAACACAAACTGTTTTCACATCCCGTTGCCTGGTATGAGTGGTTATGTA AAGGGCAGCCGGTAAGTCAAATGGAGTATATACCAGGCTGAATATTT