Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0592500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:29520232:29527462:1 gene:Os05g0592500 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated protein family protein. (Os05t0592500-01)
Sequence	ATGTTCTGGCGCATGACTGGTCTCTCCGCGGCCTCGCCGGTGGATACAATTCTAGACAAG GAGAACTTCACATTAGAAGAACTTCTTGACGAGGATGAAATAATTCAGGAGTGCAAAGCG CTGAATACTCGTCTCATAAATTTCTTGCGAGACAAGGCTCAAGTGGAGCAATTGCTTCGT TACATCGTGGAAGAAGTACCAGAAGATTCTGAAAAGAAACGTTCTTTTAAGTTCCCATTC ATTGCTTGTGAGATATTTACCTGTGAAATTGACATCATCTTGAGGACCTTAGTAGAGGAT GAAGAGTTAATGGATTTGCTTTTCTCATTTGTAAGACCTGGTCATCCACATAGCACATTG TTAGCTGGATACTTCAGTAAGGTGGTAATATGTTTGATGCTGAGAAAGACTTCCCCTCTA ATGAACTATGTCCAGGAGCACCCAGACATTGTTGTCCATCTTGTTGATCTCATCGGCACC ACCTCAATAATGGAGGTTCTGATTCGACTGATAGGTGCTGATGAGACCATATACTCGAAT TATGCTGACACATTGCAGTGGTTAGAAAATACAGATGTACTGGAAATGATTGTGGATAAA TTTAGCTCATCTGATTCCCCTGAAGTACACGCCAATGCTGCAGAAATTCTTTCTGCAGTG ACTCGATGCGCCCCTCCTGCTCTCGCTGCAAAAATATGCAGCCCAAGTTTTGTTGGGAGA TTATTTCGTCATGCTCTTCAAGAATCACGCCCCAAATCTGTCCTGGTTCATTCATTATCA GTATGTATATCTTTGTTGGATCCAAAAAGACTAGCGTCAGCCTCATACCAAGCATTTAGA AGTAACTTGAGCCATGGGACATTGGTTACTGCTAGTCCAGAGACAGTTGATGGTATGCTG GAGAGCCTAGGTGATTTGCTGAAGTTGTTGGATATTTCTTCTGCTGAAAATGTTTTACCT ACAACATATGGATGTTTGCAGCCCCCTCTTGGAAAACACCGCTTGAAGATTGTGGAATTC ATCTCTGTTTTGCTGACGATTGGTAGTGAAACTGCGGAACAGGAGCTAATCAACCAATCT GCAGTAAAACGTTCCATTGATTTGTTCTTCCAGTACCCTTACAATAACTTTCTGCACCAT CATGTCGAGAGTATTATCATTTCTTGTCTGGAAGTTAATAGATCCCAGCTGATTGACCAT GCCCTTAATGAATGCAATCTTGTTGGCAAAATTCTTGCTGCTGAAAGAAGTTCCTCCCTG TCAACAGAATCTAACACACCAACATTACTATCTGAAGGGAAGGTGCCTCCAAAAATTGGG AATATTGGGCACATAACTCGAATAGCTAATAAGCTTATTCAACTGGGAAATAGCAACAGC ATAATCCAGTCTCATTTGCAGGAGAACAGCGAGTGGGTTGAATGGCAGACAACTGCCCTG GTCAAACGCAATGAGGTTGAGAACGTTTATCATTGGGCCTGTGGTCGTCCGACTTCTCTA CATGATCGTGGTAGGGATAGCGATGATGATGACTTCCGAGACAGGGACTATGATGTGGCG GCACTTGCTAATAACCTGAGCCAGGCATTCCGGTATGGAATGTACAGCAATGATGACATT GAAGAGGCACAAGTAATTGAACGAGATGATGAGGATGTCTACTTTGATGATGAATCAGCT GAAGTAGTAATATCTTCGTTGCGTTTGGGTGATGATCAGGACAGCAGCTCCCTCTTTACG AATTCAAACTGGTTTACCTTTGATGGTGATAGAGGAATAAATGACCGTTTAGCTGCCTCT GTCCCTTCTTCATCTCCCAATTCTGAAGAAACTTCTCTAAACACGGAGGAAACTGATGAG GTGCAAATTGGTGAGGACACTAGCATCGAGCCACAACTGGAAAGTGTCTCTCTTGAAAAT GGCCCTGTTGAGGAGGCCGGGGACTTAGCAGATGTAAGTAAACAAACAGATTCTAACACG GAAGACGAGAAACTATTGTGCACTGAAGAGGAAGATTTGTCCAAAGAAGCTGAAGAATCT GAGCGACACGTGGATGTTCGAGATGGCCAGGTAGACATACAGGCAGAAGATGCAGCTGAA GGATCATGCGGGGATATGGGTACAGGGATAGCAGTGGATGAACCTGTCAGCCCATCATCT GAGCCCAACAATGCTTCGGCTGGAGCTTCACCAGACACAGGTGATATCCATACTGCTGGC TCAACTGGATCCAACGATTCAGGTGCAGAGTTGCATGCCAAGGAAGATTCACAGGATGGA CAGAAAACTGATGAGCCCACAACAACAGAGTGA

Peptide Sequence

PEP ID	Os05t0592500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:29520232:29527462:1 gene:Os05g0592500 transcript:Os05t0592500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated protein family protein. (Os05t0592500-01)
Sequence	MFWRMTGLSAASPVDTILDKENFTLEELLDEDEIIQECKALNTRLINFLRDKAQVEQLLR YIVEEVPEDSEKKRSFKFPFIACEIFTCEIDIILRTLVEDEELMDLLFSFVRPGHPHSTL LAGYFSKVVICLMLRKTSPLMNYVQEHPDIVVHLVDLIGTTSIMEVLIRLIGADETIYSN YADTLQWLENTDVLEMIVDKFSSSDSPEVHANAAEILSAVTRCAPPALAAKICSPSFVGR LFRHALQESRPKSVLVHSLSVCISLLDPKRLASASYQAFRSNLSHGTLVTASPETVDGML ESLGDLLKLLDISSAENVLPTTYGCLQPPLGKHRLKIVEFISVLLTIGSETAEQELINQS AVKRSIDLFFQYPYNNFLHHHVESIIISCLEVNRSQLIDHALNECNLVGKILAAERSSSL STESNTPTLLSEGKVPPKIGNIGHITRIANKLIQLGNSNSIIQSHLQENSEWVEWQTTAL VKRNEVENVYHWACGRPTSLHDRGRDSDDDDFRDRDYDVAALANNLSQAFRYGMYSNDDI EEAQVIERDDEDVYFDDESAEVVISSLRLGDDQDSSSLFTNSNWFTFDGDRGINDRLAAS VPSSSPNSEETSLNTEETDEVQIGEDTSIEPQLESVSLENGPVEEAGDLADVSKQTDSNT EDEKLLCTEEEDLSKEAEESERHVDVRDGQVDIQAEDAAEGSCGDMGTGIAVDEPVSPSS EPNNASAGASPDTGDIHTAGSTGSNDSGAELHAKEDSQDGQKTDEPTTTE

Transcript Sequence

Transcript ID	Os05t0592500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:29520232:29527462:1 gene:Os05g0592500 gene_biotype:protein_coding transcript_biotype:protein_coding description:SIT4 phosphatase-associated protein family protein. (Os05t0592500-01)
Sequence	ATTGCTTGTCTTCAGGCTCTCCTCCTAGCTCCCAGAGACCAGAGTAGTAGAGAGAGAGAG GAGGCAAAGCAGCAGCAGCAGCCGCAGCCAATACGATCCGCTCCTCCTCGCTCGCTCCTC GTCGACCTGGAGATTCCCCCCGCGCCGGCGCCGCCGATTTGATTCGCCCACCCCTAGGCC CCAGCTAGCTAGATCTGGTGCGGATCCCTCGCCGTCGCCGCCATGTTCTGGCGCATGACT GGTCTCTCCGCGGCCTCGCCGGTGGATACAATTCTAGACAAGGAGAACTTCACATTAGAA GAACTTCTTGACGAGGATGAAATAATTCAGGAGTGCAAAGCGCTGAATACTCGTCTCATA AATTTCTTGCGAGACAAGGCTCAAGTGGAGCAATTGCTTCGTTACATCGTGGAAGAAGTA CCAGAAGATTCTGAAAAGAAACGTTCTTTTAAGTTCCCATTCATTGCTTGTGAGATATTT ACCTGTGAAATTGACATCATCTTGAGGACCTTAGTAGAGGATGAAGAGTTAATGGATTTG CTTTTCTCATTTGTAAGACCTGGTCATCCACATAGCACATTGTTAGCTGGATACTTCAGT AAGGTGGTAATATGTTTGATGCTGAGAAAGACTTCCCCTCTAATGAACTATGTCCAGGAG CACCCAGACATTGTTGTCCATCTTGTTGATCTCATCGGCACCACCTCAATAATGGAGGTT CTGATTCGACTGATAGGTGCTGATGAGACCATATACTCGAATTATGCTGACACATTGCAG TGGTTAGAAAATACAGATGTACTGGAAATGATTGTGGATAAATTTAGCTCATCTGATTCC CCTGAAGTACACGCCAATGCTGCAGAAATTCTTTCTGCAGTGACTCGATGCGCCCCTCCT GCTCTCGCTGCAAAAATATGCAGCCCAAGTTTTGTTGGGAGATTATTTCGTCATGCTCTT CAAGAATCACGCCCCAAATCTGTCCTGGTTCATTCATTATCAGTATGTATATCTTTGTTG GATCCAAAAAGACTAGCGTCAGCCTCATACCAAGCATTTAGAAGTAACTTGAGCCATGGG ACATTGGTTACTGCTAGTCCAGAGACAGTTGATGGTATGCTGGAGAGCCTAGGTGATTTG CTGAAGTTGTTGGATATTTCTTCTGCTGAAAATGTTTTACCTACAACATATGGATGTTTG CAGCCCCCTCTTGGAAAACACCGCTTGAAGATTGTGGAATTCATCTCTGTTTTGCTGACG ATTGGTAGTGAAACTGCGGAACAGGAGCTAATCAACCAATCTGCAGTAAAACGTTCCATT GATTTGTTCTTCCAGTACCCTTACAATAACTTTCTGCACCATCATGTCGAGAGTATTATC ATTTCTTGTCTGGAAGTTAATAGATCCCAGCTGATTGACCATGCCCTTAATGAATGCAAT CTTGTTGGCAAAATTCTTGCTGCTGAAAGAAGTTCCTCCCTGTCAACAGAATCTAACACA CCAACATTACTATCTGAAGGGAAGGTGCCTCCAAAAATTGGGAATATTGGGCACATAACT CGAATAGCTAATAAGCTTATTCAACTGGGAAATAGCAACAGCATAATCCAGTCTCATTTG CAGGAGAACAGCGAGTGGGTTGAATGGCAGACAACTGCCCTGGTCAAACGCAATGAGGTT GAGAACGTTTATCATTGGGCCTGTGGTCGTCCGACTTCTCTACATGATCGTGGTAGGGAT AGCGATGATGATGACTTCCGAGACAGGGACTATGATGTGGCGGCACTTGCTAATAACCTG AGCCAGGCATTCCGGTATGGAATGTACAGCAATGATGACATTGAAGAGGCACAAGTAATT GAACGAGATGATGAGGATGTCTACTTTGATGATGAATCAGCTGAAGTAGTAATATCTTCG TTGCGTTTGGGTGATGATCAGGACAGCAGCTCCCTCTTTACGAATTCAAACTGGTTTACC TTTGATGGTGATAGAGGAATAAATGACCGTTTAGCTGCCTCTGTCCCTTCTTCATCTCCC AATTCTGAAGAAACTTCTCTAAACACGGAGGAAACTGATGAGGTGCAAATTGGTGAGGAC ACTAGCATCGAGCCACAACTGGAAAGTGTCTCTCTTGAAAATGGCCCTGTTGAGGAGGCC GGGGACTTAGCAGATGTAAGTAAACAAACAGATTCTAACACGGAAGACGAGAAACTATTG TGCACTGAAGAGGAAGATTTGTCCAAAGAAGCTGAAGAATCTGAGCGACACGTGGATGTT CGAGATGGCCAGGTAGACATACAGGCAGAAGATGCAGCTGAAGGATCATGCGGGGATATG GGTACAGGGATAGCAGTGGATGAACCTGTCAGCCCATCATCTGAGCCCAACAATGCTTCG GCTGGAGCTTCACCAGACACAGGTGATATCCATACTGCTGGCTCAACTGGATCCAACGAT TCAGGTGCAGAGTTGCATGCCAAGGAAGATTCACAGGATGGACAGAAAACTGATGAGCCC ACAACAACAGAGTGAAAGTATGGTTGTGGTATGGATTGTACCATCAGACCAAAAGCAGCT ACTGCTCGGCAGATCCTTCCAGAAGGTATGGTAGTACTCATGCCAAAGTCCCTAACCTCA CATCTTGGCAATCATGGAGAAATCAGAAGCAATGAGTGCTGTGCAACAACATAAAGCTTT TGCTATCTGCAGTTGCAATTTGCAAACGAGCACTTCCATATGCCGACTGTCTCACCTCAT CTCCAGATGCCTTGTCCTCAATTTGCATGGGACTCGTACCACGTAATGGTGGGAAAGTTG GTTTTCCTTTTTTGTTCAGACCTCACCTCAATTGGTGGTAGCTTTTGATGATCCGTTTCA GCTGGTTTTGGCTACGTTGGTATTTGTCTTGTTTCTTACGCTAGGGCACTCGAACTGTAG CATTGGCAGTGAGTTTTTTCCCTTGTTTCTTTTAAATTGGATTAGCTATCTCTGTATTGC TTAAGAGAAACATACGGCTGGCTTTTTCTCTAGTTAAATTAAGAGTATATTTGTTCTTCT GTTCGGGAGTGGATTCTATTCCCATCGACGATGGGATACCCTCTCGTGTACCTTTACCTT TCAAATTTGATGCAAATAGTTGTGAAAAATTCTG